Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01211 ATGTTTGTGATTGTTGTGGTTTGTGCTTTTGTTTCATTGAGTTCTTATATCCATGGTTCTAATGTGAATGATTTCTGCATAGCAGGCCTGAAGGGTCCAGATAGCCCTAGAGGGTATCACTGCTTGGCAGCTGAAACAGTAAAAGCAGAGGACTTCAACACGTGTAGAGATGGAAAAGGGTGGAGTATTTCCAATGCTGGGAGCGAAGTACTCATAATGCATGAAGGTGAAATGATTGCTGGAATCCTTACACCTATCACTGCTTATGTGAATACACTGAAAAAGGGTGATGTTATTGTTTTCCCACAAGGACAGATGCATTTTCAAATTAACTCTGGTAAGGCCAAAGCTGTTGCTTATGCTGCTTTTAGCAGCCCAAGGCCACGCCTCCATCTACTTCATCAGCTGTTATTTGCCAACAACGTCCCTACTAAAAAATAA 441 0.4195 MFVIVVVCAFVSLSSYIHGSNVNDFCIAGLKGPDSPRGYHCLAAETVKAEDFNTCRDGKGWSISNAGSEVLIMHEGEMIAGILTPITAYVNTLKKGDVIVFPQGQMHFQINSGKAKAVAYAAFSSPRPRLHLLHQLLFANNVPTKK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01211 146 PRINTS Germin signature 62 82 IPR001929 GO:0030145
Pste6g01211 146 PRINTS Germin signature 124 139 IPR001929 GO:0030145
Pste6g01211 146 PRINTS Germin signature 91 111 IPR001929 GO:0030145
Pste6g01211 146 Gene3D Jelly Rolls 61 146 IPR014710 -
Pste6g01211 146 SUPERFAMILY RmlC-like cupins 68 141 IPR011051 -
Pste6g01211 146 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 67 143 - -
Pste6g01211 146 Pfam Cupin 67 131 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01211 Pste-Chr6 5161887 5162431 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01211 1 145 Miscellaneous Gene Families AT5G20630 33.155 8.36e-28 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01211 6 5161887 5162431 Pste6g01211 6 5161887 5162431 ECH