Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01210 atgagcactggagagcttctcagcatcgaacctgtcgaactcaagttcccctttgagctgaagaagcagatctcctgttctcttcaattgtccaataagaccgattgctatgtagccttcaaggtcaagacaaccaatcccaagaagtattgtgttcgtcccaacactggaattgtcacgccacgatctacctgtgatgttatggttaccatgcaagcgcaaaaagaagctccggttgacatgcaatgcaaggataagtttcttcttcagagtgtaaaaactgttgatggtgccagtccgaaggacatcacggcagaaatgttcaacaaggaggcagggcatgtggtcgaggagtgcaaattgagagtggtgtatgtttctccacctcaaccaccgtctccagttcctgaaggttcggaggaaggatcgtcacctagaggttctgtttcagagaatggaaatgccaatggttctgacttcatgcaggtagcaagaggatttactgaacgacccgaggctcaagaaaaatctgcagaggctagagctcttatctctaggctgactgaagaaaagaataatgcaatgacacaaaatagcaagcttcgtcaggaactggtgaggattacagtatatgattga 639 0.0 MSTGELLSIEPVELKFPFELKKQISCSLQLSNKTDCYVAFKVKTTNPKKYCVRPNTGIVTPRSTCDVMVTMQAQKEAPVDMQCKDKFLLQSVKTVDGASPKDITAEMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSVSENGNANGSDFMQVARGFTERPEAQEKSAEARALISRLTEEKNNAMTQNSKLRQELVRITVYD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01210 212 Gene3D Immunoglobulins 2 130 IPR013783 -
Pste6g01210 212 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Pste6g01210 212 MobiDBLite consensus disorder prediction 143 161 - -
Pste6g01210 212 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 205 IPR016763 GO:0005789
Pste6g01210 212 SUPERFAMILY PapD-like 2 141 IPR008962 -
Pste6g01210 212 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Pste6g01210 212 Coils Coil 170 204 - -
Pste6g01210 212 MobiDBLite consensus disorder prediction 127 180 - -
Pste6g01210 212 PIRSF VAMP_assoc_prot 1 209 IPR016763 GO:0005789
Pste6g01210 212 FunFam Vesicle-associated protein 1-1 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01210 Pste-Chr6 5152939 5165383 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01210 6 5152939 5165383 Pste6g01210 6 5152939 5165383 ECH
Pste6g01210 6 5152939 5165383 Pste1g01210 1 3855129 3859183 PCT