Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01205 ATGAAGATGATTTACATTCTTTTCCTCATGGCTCTTGTATCACCCAGATGCTATGCTGCTGTGAATGATTTTTGTGTAGCTGACCTAAAAGGTCCAGATAGCCCCTCAGGCTATCAGTGCAAGCCACCTAACACAGTGACAGTGGATGACTTTGTGTTCTCTGGCTTTGTGGCTGGAAACACCACAAACACTTTCAATGCTGCATTAACCTCTGCATTTGTTACTGATTTTCCAGGTGTGAATGGTCTTGGCGTTTCTGCAGCACGGTTAGACATAGCCAAAGGTGGATCAATCCCAATGCACACTCATCCTGGAGGCACAGAACTTCTAATAATGGTGAAAGGTCAAATCACTGCTGGCTTCATGACACCAACTGCGCTTTATCAGAAGACACTGAAACCAGGAGATCTGATGGTTTTCCCACAAGGGCAGTTGCATTTTCAAGTGAATTCTGGAAAGGGAAAAGCCACTGCTTTTCTTGCTTTCAGCAGTGCAAACCCTGGAGCACAACTACTTGATCTTCTCCTATTTGGCAACACCTTACCTTCTGAGTTGGTTGCACAAACTACCTTCCTTGATGTTGCACAAGTGAAGAAGGTTAAGGCTCGTTTTGGTGGTAGAGGCTAG 627 0.4498 MKMIYILFLMALVSPRCYAAVNDFCVADLKGPDSPSGYQCKPPNTVTVDDFVFSGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPGGTELLIMVKGQITAGFMTPTALYQKTLKPGDLMVFPQGQLHFQVNSGKGKATAFLAFSSANPGAQLLDLLLFGNTLPSELVAQTTFLDVAQVKKVKARFGGRG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01205 208 Gene3D Jelly Rolls 19 207 IPR014710 -
Pste6g01205 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Pste6g01205 208 PRINTS Germin signature 101 121 IPR001929 GO:0030145
Pste6g01205 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Pste6g01205 208 SUPERFAMILY RmlC-like cupins 23 205 IPR011051 -
Pste6g01205 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 20 201 - -
Pste6g01205 208 FunFam Auxin-binding protein ABP19a 18 207 - -
Pste6g01205 208 SMART Cupin_1_3 54 198 IPR006045 -
Pste6g01205 208 CDD cupin_OxOx 19 204 IPR001929 GO:0030145
Pste6g01205 208 ProSitePatterns Germin family signature. 96 109 IPR019780 GO:0030145
Pste6g01205 208 Pfam Cupin 57 198 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01205 Pste-Chr6 5110228 5110854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01205 1 206 Miscellaneous Gene Families AT5G20630 58.373 9.88e-81 238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01205 6 5110228 5110854 Pste6g01205 6 5110228 5110854 ECH