Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00945 ATGAACGGTGGTGATGAGGTCGTGGCAGCTCCGGCGGGTCCACCGCAGCCGCTGGAGTGGAAATTCTCGCAGGTTTTCGGGGAACGTACGGCGGGGGAGGAAGTTCAGGAAGGTAATTGTTGCTACGTTGTTTTGTCGGATCCAGTTGTTGATGTGTTGGGATTAGGGTTTGGTTCCTTGCTTTCGATCTGTTTCGGATCATGTTCTGTTGCTTCCTTGTTGTTTTTTATTCCGGTGGACATAATTTCTGCAATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGATCGTGGTGGTCGAGTAGTTCTCTTTGAGCGGACAGATACAAAAGATCATCATGGATCAAGAAGGGATTTGGAGAGGATGGATTATTCTATTAGTAGACATCCCGAGTTCCGTTATAAAACAGAGTTTCAGAGTCATGAGCCCGAGTTTGACTATCTTAAGAGTTTGGAAATAGAAGAGAAAATTAACAAAATCAAATGGTGCCAAACAGCTAATGGTGCTTTATTCCTTCTATCTACAAATGATAAAACCATCAAGTTTTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAGTTTCTGACATGAATGTTGATCCTAAAGCAATGGGAAATGGTTCACTTGCGAGTTCAAGTAATTCCAGTAGTTCTAGATCATATCTTGCAAATGGAGTATCTCAAGATGGACCATATAATTATTTAAGCAATGATTTCTCATTTCCACCAGGAGGCATACCTTCACTAAGATTACCACTGGTAACCAGCCATGAGACAAGTTTGGTTGCTCGATGTCGTAGAGTATATGCCCATGCTCATGATTATCATATCAATTCTATTTCAAATAACAGCGATGGTGAAACTTTCATATCAGCTGATGATTTACGAATAAATCTTTGGAACCTGGAAATTAGCAATCAAAGTTTTAATATTGTTGATGTCAAGCCTGCGAATATGGAGGATCTGACTGAGGTTATAACATCAGCAGAATTTCACCCTACACATTGTAATACATTGGCATATAGCAGTTCTAAGGGTTCAATTCGTCTTGTTGATTTGCGACAGTCAGCATTATGTGATTCTCATGCCAAACTATTTGAGGAACAGGAGGCCCCTGGGTCCAGATCATTTTTCACAGAGATTATTGCCTCTATCTCAGACATAAAATTCGGGAAGGATGGGAGATATATACTTAGTCGTGATTACATGACCTTAAAGTTATGGGACATCAATATGGATTCTGGTCCAGTTGCAACATTCCAGGTTCATGAGTATTTAAGGCCAAAGCTTTGTGATTTATATGAAAATGATTCAATTTTTGACAAGTTTGAATGTTGTCTAAGTGGTGATGGATTGCGTGTTTCTACTGGTTCTTACAGCAATCTATTCCGTGTGTTTGGTTGTGTTCCGGGAAGTACTGAGGCTACAACTTTGGAAGCCAGTAAAAATCCAATGAGACGCCAAGTTCCAACCCCTTCAAGGCCTTCTAGATCACTGGGAAACAGTCTAACTAGAGTTGTAAGACGTGGAGCAGAAAGCGGTGTGGATGCAAATGGGAATTCTTTTGATTTTACAACAAAGTTGCTGCACTTAGCGTGGCACCCAACAGAGAATTCAATTGCTTGTGCTGCTGCAAATAGCTTATACATGTATTATGCTTGAGGAAGAAAGATGGTTGAAGAGCATTATTTGCTTTGGTTGACCTGTTTTTGGGTTGCTGTGGAGAAGGCTTGTTTCCCCTTCTTACCTACCATTGAGTTGGAGGCTACGTTAACTCACACTACAAGTGCCCTTCAAAAATCTTTAGCAGGAGCTTTTAGAAAAAAGATCCAGAAGTGGCTGTTTCAAAATTCCTGGGTAGGCAGACCTTATTTTGTTTCTGGATGGGCAGCATCTCTTTTTTTCAATTTTCCCTCCTTCCAACCCTAATATTCTTTCCCCCTTTTTCTGTATCTTCCTATAAAAAGAGAAGGTGCAGTCAATGCTTCATATTGTGTTTGGCTTGCAAATGAAGAGAAAATGTGATTGTAGCTCTCCTACAACAAATACTAAAGGATGTTCAATATCTGCCACTAGGATAAAAGATAAAATGTAGTTCTTTTCTTTTTACCCAGATGTCTTGTGGGATGGAGCAGTGGAAACCTGCGGTGCATCATTTTTTCATTGATTATTTTTGTGTTGGGAATTAATTTGACACCGTTTCAAACTCTAATTCTTGCTGCACTTGTCAATTTTTGTGTAAAATGTCAAAAGGAAGTAATAACTTTAGGTTTCAATGTAGGATAAACGGGATTGTCTGTGCCACCAAATGTTTATGGTTTTCCCACTTGTTGGATTTTTTTCCTTTTATGATTTCTTAATGTGCTGCCCAGAATGTAAGGTTCTCAAAAAGCAATCAACAATTTCATGATTTGGTTGCTCAACATTTATTTGTTACTATGCTAAAGTACAATTTTTGGCCCTTCCAGTTGTGGCGTCGTGTCCTGTCCTGTAGATGAGTATTGTTTTAGCTTCTGTATAATTTTAATGCGGATATTGTGTTGAACGTTGTTCCTAAAATGCCCTTTCTAAGGACTAAAGACTAAGTGCGGA 2595 0.3942 MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEGNCCYVVLSDPVVDVLGLGFGSLLSICFGSCSVASLLFFIPVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTKDHHGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKAMGNGSLASSSNSSSSRSYLANGVSQDGPYNYLSNDFSFPPGGIPSLRLPLVTSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSYSNLFRVFGCVPGSTEATTLEASKNPMRRQVPTPSRPSRSLGNSLTRVVRRGAESGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00945 554 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 77 237 - -
Pste6g00945 554 SUPERFAMILY WD40 repeat-like 79 546 IPR036322 GO:0005515
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 330 358 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 86 106 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 415 440 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 387 414 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 302 329 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 359 386 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 133 161 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 274 301 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 441 467 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 162 190 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 523 552 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 Gene3D - 255 552 IPR015943 GO:0005515
Pste6g00945 554 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 2. 272 286 IPR018067 -
Pste6g00945 554 MobiDBLite consensus disorder prediction 483 502 - -
Pste6g00945 554 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 15 554 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PIRSF PPA2_B55 12 48 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 PIRSF PPA2_B55 59 554 IPR000009 GO:0000159|GO:0019888
Pste6g00945 554 SMART WD40_4 372 410 IPR001680 GO:0005515
Pste6g00945 554 SMART WD40_4 263 302 IPR001680 GO:0005515
Pste6g00945 554 SMART WD40_4 313 353 IPR001680 GO:0005515
Pste6g00945 554 SMART WD40_4 146 186 IPR001680 GO:0005515
Pste6g00945 554 SMART WD40_4 69 107 IPR001680 GO:0005515
Pste6g00945 554 MobiDBLite consensus disorder prediction 206 223 - -
Pste6g00945 554 MobiDBLite consensus disorder prediction 198 223 - -
Pste6g00945 554 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 249 550 - -
Pste6g00945 554 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 146 160 IPR018067 -
Pste6g00945 554 Gene3D - 79 244 IPR015943 GO:0005515
Pste6g00945 554 Pfam WD domain, G-beta repeat 266 302 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00945 Pste-Chr6 3738520 3748116 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00945 6 3738520 3748116 Pste3g03574 3 28097322 28106362 ECH
Pste6g00945 6 3738520 3748116 Pste6g00945 6 3738520 3748116 ECH
Pste3g03574 3 28097322 28106362 Pste6g00945 6 3738520 3748116 PCT