Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00930 CACACACTTGACACACTGCACATCACATCACATCACATAACATCACCATCACATACATGATGATACGTTCATCCTCGTCACTCTTCATCCCCCCACTTTCTTCCATTTCGGAAATACCTAACAAAACAAACAGTCCCAGAAATAATCATTAAACTCCCAAAGTTTGTTCTGTTCCACTCATCACTCACCATCACCCTCCACTCTCTAACCTCAATTTTCAAATTAGAGTTTACTCTTTTCACTGCTCTAATTTCCCCTCCTTGATCTCACTCCAACCACGAGATGCTCAAAACTTCCGCTTATCAAGTTGGTTACTTTCGTTCAAATTGTCGAGAAAGCAAAGCATTTTAAATTTGTTGAGAGGGTTGTCATGCTGAATGTTGTTGCCAAGCAGTGGAGTAGGGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAAACTCAGACACATCACTTGGTTGTGAGGGAGATTGGTGAGGAGATTGATTTGGAAATTGGAGCTGGAGAGGATGACCCGTCATTTGGTAACTCTACTCTAATTGGTGCACCGATGCGGGAATCATCTGTAGAAGAACATGGTGAGAGCAAGCAGATGGGGATGGTTTCTCAGCTTCCTAATGATGCTCAAGATATTTCCAAGACCCAACAAGTGAAAAGGAAGAAAAAAGTTGTTAAAAGATGGAGAGAAGAATGGGCAGACACCTATAAATGGGCTTACGTTGATGTGAAGGATGGGACACCGAGAATTTTCTGCTCTGTCTGTAGGGAGCATGGCCGGAAGCATAGAAGAAATCCTTATGGGAACGAAGGCAGTCGTAATATGCAGATGAGTGCCCTGGAAGAACACAACAACAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTTCAAAGATAAAATTGTGGTTGACAAGCCTGTTTATGTAAAAGTTGCCATGTCAAAAACAGCAGGATCCATTCTTGAAGCTACGCTGAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCTGTTCAGGAAGCCGTTCAAGCCCTTGAAAGAGTCATTGCAAAAAATTCTCGTTACATTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTCCGAGTGTCTTGGGTGGATGATAGGGGTGAGACATGTGTTAATCGGGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTGTTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAAAACGCCTTATCACCATACAAATTAGGAGGAGCAGCTGGTGGAAGTGATTTTGATCCCAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAAATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCATCAGAGGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTTGCAGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGGATATTTTGGTCGGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGACTGGTTTTCTTTGCTCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGATGTGTCGTGAGTGGTTCTGGAAAGATCGCAATGCATGTCTTAGAGAAGCTAATTGCCTACGGTGCTCTTCCTATTTCAGTATCAGACTCTAGAGGCTATTTGGTTGATGAGGATGGATTTGACTACATGAAAATATCATTTTTGAGAGACATCAAAGCTCAACAGAGAAGTTTACGAGACTATTCAAAGACCTATGCTAGGTCCAAATATTACGATGAAGCAAAACCATGGAATGAAAGGTGTGATGTTGCATTTGCTTGTGCTTCACAGAATGAAATTGATCAATCTGATGCCATTAATTTGGTTAATTCTGGTTGTCGTATACTAGTAGAAGGTTCAAACATGCCTTGTACACCTGAGGCAGTTCAGATTCTGAGGAAAGCCAGTGTTCTTATTGCTCCTGCGATGGCTGCTGGTGCAGGAGGGGTTGTGGCTGGAGAACTTGAACTAAACCATGAATGCAGTTTGATGCACTGGTCACCAGAGGATTTTGAATCTAAACTGCAGGAAGCCATGAAGCAGACTTATCAGAGAGCTATCAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCTGAGGCTCTGGTACATGGAGCAGTTATCTCTGCCTTTTTAACCATTGCCCAAGCCATGACTGATCAAGGCTCTATATAGAAGTTTCATGTTGCAAAGTTTAGAATGCATTCAAATACTGAATAGTCCAAATCATTGCTGATGCTGCAGCGCAAATTGTGAAATGATAGAATGACACTGTTGCAAAAGCATATTTCCATGTAAAATATGTAATTTCAGAAAAATTAGACTTATAAAAGAAAAATATTTGGAGAACAAACTTTAGTTTCACAACAGAATAGGCCTCTTCATTATGCCAAGAAAAAGGTGAAATTGGCCTTGGCTTATTAAACCCTGTTCGATGCTAGTTCCAAACTTGAGAAATATTTGGTCGAATATTGAGATTTGAAATAAAAGGTTAATGTTCAAATTGAATATGCTTATTGTTTAGA 2641 0.4082 MLLPSSGVGMNSAMDDMNLIQQTQTHHLVVREIGEEIDLEIGAGEDDPSFGNSTLIGAPMRESSVEEHGESKQMGMVSQLPNDAQDISKTQQVKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREHGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMAFKDKIVVDKPVYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYINIMERLLEPERMIVFRVSWVDDRGETCVNRGFRVQFNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFACASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVQILRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGSI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00930 637 Gene3D Glutamate Dehydrogenase, chain A, domain 3 196 239 - -
Pste6g00930 637 Gene3D - 394 559 - -
Pste6g00930 637 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 388 635 IPR036291 -
Pste6g00930 637 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 142 636 - -
Pste6g00930 637 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 242 369 IPR006097 GO:0006520|GO:0016491
Pste6g00930 637 Gene3D Leucine Dehydrogenase, chain A, domain 1 240 375 - -
Pste6g00930 637 FunFam NADP-specific glutamate dehydrogenase 196 239 - -
Pste6g00930 637 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 420 440 IPR006095 GO:0006520|GO:0016491
Pste6g00930 637 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 378 400 IPR006095 GO:0006520|GO:0016491
Pste6g00930 637 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 299 313 IPR006095 GO:0006520|GO:0016491
Pste6g00930 637 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 557 568 IPR006095 GO:0006520|GO:0016491
Pste6g00930 637 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 196 381 IPR046346 -
Pste6g00930 637 SMART ELFV_dehydrog_3 389 635 IPR006096 GO:0006520|GO:0016491
Pste6g00930 637 FunFam Glutamate dehydrogenase 394 559 - -
Pste6g00930 637 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 388 635 IPR006096 GO:0006520|GO:0016491
Pste6g00930 637 FunFam Glutamate dehydrogenase 240 375 - -
Pste6g00930 637 FunFam NADP-specific glutamate dehydrogenase 567 637 - -
Pste6g00930 637 Gene3D Glutamate Dehydrogenase, chain A, domain 3 566 637 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00930 218 515 EF-hand Containing Proteins AT5G07440 30.132 1.09e-33 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00930 6 3658490 3671318 Pste6g00930 6 3658490 3671318 ECH