Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00906 TCTGTAACAATTGGTGGCACCTTCCAAGCTTTTTCAAAAGAAAGCTTCGAGCAATTAAGACGGCCCATTGAGCAGGGATTTTTTTTAATTATACTATCAGCCTCTAAACCCAACAACTCTATATATTTTCACCATTTCCTTTGCAAAGAAATGAAGATACTGATTTTTCATGACAACAAATCCTGGGAGGGGGTTGTGATGGCACAAGCTGCTGTGCAGAGGTGCAATGCGACAGTAAACTTCTTTGAAGAAGAGAAGTTAGCATTCTATCAAAAGGTTATCCCTGGCTACTTTTACATGAGTGGAATACAGAATGCCTCACATGAAAAACTCGAGCAAATCAATGAAGATGTTCTTCCTTATGAAGCTGCACTTCATGCCTCATTAGCTGTTAACTATCTCTTAAAACATCAGCAGGATGAGCCCTTCGAGGAGGGAAAATATCATGTTTCATTTCATTTTATTTCCAAAGAAACTATGCCTTTCTATAAATGCTTTAATTTGTTGACCATCTTCCTTGTTTTGGCTGCAACTCCAATCCTCTCATCATCCGATCAACTCTCCACAAAGTTTCTAGATATTGCCAAAACGCCTGAAGTTTTTGATTGGATGGTAAAAATCAGAAGGAAAATTCATGAGAATCCAGAGTTGGCATACGGGGAATTTGAGACCAGTAAAGTGATCAGAGAGGAATTGGATAAAATGGGTATCCCATATAAACACCCAGTTGCAGTAACTGGTGTTATTGGATTCATTGGGACAGGAACCTCACCTTTTGTTGCATTACGAGCTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAGGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTGACTATGCTTCTTGGGGCAGCGAAGATTCTCAAACAGCATGAAAAAGAGATACAGGGGACTATTGTTCTTGTTTTCCAACCAGCAGAGGAGGGAGGTGCAGGGGCTAAGAAAATTTTAGATGGTGGAGCCTTAGAGAATGTTACTGCTATCTTTGGATTACATGCAGTGCCTAACGTTCCAGTAGGTTTAGTGGCCTCTAGGTCTGGTCCAATATTGGCAGGAAGTGGCTTCTTTGAAGCAATAATAAATGGAAAGGGAGGTCATGCAGCCATTCCCCAACTTACTATAGACCCCATAATTGCTGCTTCTAATGTCATCATTAGCCTTCAACACCTTGTTTCTCGCGAGGCTGATCCTCTCGAACCCACGGTTGTGACAGTTTCGAAGTTCCAAGGAGGTGGTGCATTCAATGTTATTCCAGATTACGCCACAATTGGTGGCACCTTCCGAGGTTTTTCCAAAAATGGCATGGAGCAACTGAAACAGCGCATCGAGCAGGTTATCATTGGTCAAGCTGGGGTGAATAGGTGCAATGTAACTGTCAACTTCTTTGATGAAGTGTCACCTATGAATCCTCCAACTGTAAATAATGATGAGTTGCATAAGCACTTTCAAAATGTTGCTGGAAATTTGCTTGGCGTGGACAAAGTTATTAACATGCCACCGTTCATGGGCGCTGAAGACTTTGCATTCTATCAAGAAGTCATACCTGGCTACTTTTTCATGCTTGGAATGAAGTATGCTTCACTCGAGCCGTTTCAGTCATTGCACTCACCCTATCTTAGAATCAATGAAGATGGGCTTCCTTATGGGGCTGCACTTCATGCCTCATTAGCTACTACTTATCTTATAAAAATTAAGCAAGTAATTGAGTTTGGACTAATCCGCTTTATTGATGAAATGAAAGAACGTTTCTGGTTCGTTTTGTTTTGTTCTTCCTCAATTTCATTTCCATTCTCTCCAAACCCCAAACGAATTATGTGTTTGTGTTTCTCCAAATGGTTCCATTTGTTCGCCATCTTCCATGCCTTGGTTGCAACTCCAATATTGTCATCAACAGATTCCTCAAATCAATTCTCCACAAACTTTCTAGACATTGCCAAGAAACCTGAAGTTTTCGATTGGATGGTCAAAATCAGAAGAAAACTTCATGAGAATCCAGAGTTGGCATATGAGGAATTGAATACCAGTAAACTGATCCGAGAGGAATTGGATCAACTGGGCATCCCATATAAACACCCAGTTGGAGTCACTGGTGTTATTGGATTCATTGGGACAGGAAACCCACCCTTTGTTGCAATAAGAGCTGATATGGATGCACTTCCCATACAGGAACTGGTGGAGTGGGAGCACAAGAGTAAAGTAGATGGAAAGATGCATGCATGTGGGCATGATGCTCATGTCACTATGGTTCTTGGTGCAGCAAAGATTCTCAAACAGCACGAAAAAGAGATACAGGGTACTGTTGTTCTTGTTTTCCAACCAGCGGAGGAAGGAGGTGCAGGGGCCAAGAAAATTTTAGAAGCTGGTGTCTTGGAGAATGTTAGTGCTATCTTTGGATTACATATAGCACCTAACATTCCAGTAGGTTTCGTGGCCTCCAAGTCTGGTTCAATATTGGCAGGAAGTGGTTTCTTTGACGCAACAATAAGTGGAAAGGGAGGTCATGCAGCTATTCCCCACCATTCTATTGACCCCATATTGGCAGCTTCTAATGTCATTATTAGCCTTCAACACCTTGTTTCTCGCGAGGCTGATCCTCTGGATCCCCAGGTTGTGACGGTTGCAAAATTCCAAGGAGGTGGAGCATTCAATGTGATTCCAGATTATGTCTCAATTGGTGGCACCTTCCGAGCTTTTTCTAGAAAAACATTGGAGCAACTTAAACTGCGTATTGAGCAGGTTCTAATTTTTGGAAAACCTTCTAATTACCATAAACAAGTGGCTTCTTCTATTCAACCTATGCTAATTACCATAGTAGCTGGAGCTTTGTGCATCTCACCCTGTTTACATGAACTTGCGAGTTTCTGTTGCTGCAAAAGGTTATTTGCATCTTGGACAGTATTTGCCAGTGCATTTGTGGTAGGGGCTAAGGCTGATTCATTTAAGCAGGTTATCATTGGCCAAGCTGCGGTGCAGAGGTGCACTGCAACAGTTAGCTTCTATGAAGAAGTGGCACCTATCTATCCTCCAACTGTAAATAATGATGAGTTGCACATGCATTTTCAAAATGTCGCTGGGAATTTGCTTGGCATCAACAAAGTTCACAACATGCCACCATTCATGGGTGCTGAAGACTTTGCATTCTATCAAGAGGTTGTACCTGGCTACTTCTTCATGCTTGGAGTGATGAATGATTCACCTGAACCAATTCATCCATTACACTCACCCCATCTAAAAATCAACGAAGATGGACTTCCCTATGGGGCTGCACTTCATGCATCATTAGCTGCTAGTTATCTTACAAAATATCAGCACGACGGATCCAAGGTTGCGGGCAGATATCATGATGAATTA 3405 0.4214 SVTIGGTFQAFSKESFEQLRRPIEQGFFLIILSASKPNNSIYFHHFLCKEMKILIFHDNKSWEGVVMAQAAVQRCNATVNFFEEEKLAFYQKVIPGYFYMSGIQNASHEKLEQINEDVLPYEAALHASLAVNYLLKHQQDEPFEEGKYHVSFHFISKETMPFYKCFNLLTIFLVLAATPILSSSDQLSTKFLDIAKTPEVFDWMVKIRRKIHENPELAYGEFETSKVIREELDKMGIPYKHPVAVTGVIGFIGTGTSPFVALRADMDALPIQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEIQGTIVLVFQPAEEGGAGAKKILDGGALENVTAIFGLHAVPNVPVGLVASRSGPILAGSGFFEAIINGKGGHAAIPQLTIDPIIAASNVIISLQHLVSREADPLEPTVVTVSKFQGGGAFNVIPDYATIGGTFRGFSKNGMEQLKQRIEQVIIGQAGVNRCNVTVNFFDEVSPMNPPTVNNDELHKHFQNVAGNLLGVDKVINMPPFMGAEDFAFYQEVIPGYFFMLGMKYASLEPFQSLHSPYLRINEDGLPYGAALHASLATTYLIKIKQVIEFGLIRFIDEMKERFWFVLFCSSSISFPFSPNPKRIMCLCFSKWFHLFAIFHALVATPILSSTDSSNQFSTNFLDIAKKPEVFDWMVKIRRKLHENPELAYEELNTSKLIREELDQLGIPYKHPVGVTGVIGFIGTGNPPFVAIRADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMVLGAAKILKQHEKEIQGTVVLVFQPAEEGGAGAKKILEAGVLENVSAIFGLHIAPNIPVGFVASKSGSILAGSGFFDATISGKGGHAAIPHHSIDPILAASNVIISLQHLVSREADPLDPQVVTVAKFQGGGAFNVIPDYVSIGGTFRAFSRKTLEQLKLRIEQVLIFGKPSNYHKQVASSIQPMLITIVAGALCISPCLHELASFCCCKRLFASWTVFASAFVVGAKADSFKQVIIGQAAVQRCTATVSFYEEVAPIYPPTVNNDELHMHFQNVAGNLLGINKVHNMPPFMGAEDFAFYQEVVPGYFFMLGVMNDSPEPIHPLHSPHLKINEDGLPYGAALHASLAASYLTKYQHDGSKVAGRYHDEL 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00906 1135 Pfam Peptidase family M20/M25/M40 261 575 IPR002933 GO:0016787
Pste6g00906 1135 Pfam Peptidase dimerisation domain 370 464 IPR011650 -
Pste6g00906 1135 Pfam Peptidase dimerisation domain 838 932 IPR011650 -
Pste6g00906 1135 FunFam N-acetyldiaminopimelate deacetylase 837 948 - -
Pste6g00906 1135 NCBIfam amidohydrolase 672 932 IPR017439 GO:0016787
Pste6g00906 1135 NCBIfam amidohydrolase 204 566 IPR017439 GO:0016787
Pste6g00906 1135 Gene3D Zn peptidases 204 563 - -
Pste6g00906 1135 FunFam N-acetyldiaminopimelate deacetylase 369 486 - -
Pste6g00906 1135 CDD M20_IAA_Hyd 204 579 IPR044757 GO:0009850|GO:0016787
Pste6g00906 1135 CDD M20_IAA_Hyd 672 1105 IPR044757 GO:0009850|GO:0016787
Pste6g00906 1135 SUPERFAMILY Zn-dependent exopeptidases 198 579 - -
Pste6g00906 1135 SUPERFAMILY Zn-dependent exopeptidases 667 1118 - -
Pste6g00906 1135 Gene3D Zn peptidases 665 892 - -
Pste6g00906 1135 Gene3D Zn peptidases 50 150 - -
Pste6g00906 1135 Gene3D Zn peptidases 995 1135 - -
Pste6g00906 1135 PANTHER PEPTIDASE M20 FAMILY MEMBER 173 584 IPR017439 GO:0016787
Pste6g00906 1135 Gene3D - 369 487 - -
Pste6g00906 1135 SUPERFAMILY Bacterial exopeptidase dimerisation domain 370 479 IPR036264 -
Pste6g00906 1135 Pfam Peptidase family M20/M25/M40 729 1113 IPR002933 GO:0016787
Pste6g00906 1135 SUPERFAMILY Bacterial exopeptidase dimerisation domain 838 931 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00906 Pste-Chr6 3538840 3561211 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03582 3 28144383 28147737 Pste6g00906 6 3538840 3561211 PCT