Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00858 CGCAGACTGCATTAGAATTTAGAGTTGACATTTTTGAACTAAAACCCTGCGGTAGGGTTTATACCGATTCACACAAACCCTAACCATCAGCCCTAATATAATACTAAATGCTTTCCTTCTCCATTTGTGGTTTTCCATCCTTCTCAATCCGTAGGGCATACCCAAGAATAAGTGCAAGTTTTGGCATTGACAGCCCACAAGAGCCCGATTCAGCTAAGCCTCATGGGTCGGGTGCCAAACTTGAAGAAGAATTTCGAAAGGGAAACGTGAGTGGGGCTGCTATTGGAAGGAAGAAAAAGGCGAAGGAGAAAGTTCAATGGGTTTGCAGCAATTGTGGGTACAGTGCAGGGCAATGGTGGGGTGTGTGTAGATCATGCAGTGTAGCTGGCACTATGAAAGAGGTTAAATTCAGTGGTACTGATGGCATGGTTAGTGGGTTTTCAGTTTTGGAGGATGGTGTGGGGTCTTGGCTGCCCCAACAGGAAGGTGAGATGCGTCCCTTGAGATTGGCAGAGGTAAACAGGGGACTTGATATTCACCATTGGAGAATTCCTTTGACTGGTCCGTTTGGAGATGAAGTTTCCAGAGTGCTTGGTGGTGGTCTTGTACCAGGCTCATTGACTTTAATTGGTGGTGATCCTGGTGTCGGGAAGAGTACTCTGTTGTTACAGATAGCAGCCATTATTGCAGAAGGGCAAAATGATGGTGAATCATCTCCAGTTGTATATGTTTCTGGTGAAGAGAGTGTTGAGCAAATTGGTAACAGAGCAGATCGCCTTAGGATTGAATCAGATATTTATTTATATTCAAGTAATGATGTAGAGGTGGACATATTGAAAAAAGTTCAGTATCTCTCCCCTGGGGCTCTAATTGTTGATTCAATACAAACTGTTTATTTAAAAGGATTAATGGGAAGTCCTGGAGGGATTATGCAGATTGGACACGTGACAAAATCTGGAGACATAGCAGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTTTTGTATATGGAAGGTGAGAAGTACTCTTCCTATCGTATGCTCCGAGCTGTGAAAAATCGATTTGGGTCCACTGACGAGCTCGGAGTTTTTGAGATGTCACATTCAGGACTTCAGGCTGTTTCAAATGCCAGTGAAATGTTTCTCAGTGAGCAACACCTGGATTCGGAAATTTTAGCTGGACTAGCTGTTGCTGTAATCATGGATGGGTCCCGGACATTCCTTATTGAAATTCAGGCACTTTGTCTTTCTGGTTCAACAGGTACAAGAGAAGTTAATGGGATCCCTCTAAAAAGAGCTAATATGATCATATCTGTTCTTATAAAGCAAGCAGGCCTTCGTATACAAGAAGATGCTGTGTTTTTGAACGTTGTTAGTGGATGGTCACTGACTGAGACAGCTGGAGATCTTGCTATAGCAGCCGCAATTTGCAGCAGTTGCTTGGAAATCCCTATTCCAAATGATATTGCATTCATAGGTGAAATTGGTCTTGGTGGTGAGCTTCGCATGGTTCCTAGAATGGAGAAAAGGGTATATACCGTTGCAAAATTGGGTTTCAGAATGTGTATAGTACCCAAGGTGGCTGAAAAAGCTTTAGGAACTGACGGTTTTGAAAAGATGGAAGTTGTTGGTTGCAGGAATCTGAAAGAGGTTATTAACACTGTATTTCCTAATATAATGAAAACCTAGTAATTGGTCAGAGACTGTTTTGTATTGCTTGTACAGATCTTTTATAATTCGTATTTATCTTTTGATTTGCGCGATGTAAAGTATGTGCATTATTATGTATATTTAGCATACGTACAACAGATATGTACCAGTTATTCCAAGTATCTAGTTTTTTTTTACTCGTTAAATTATCAGAACTTGAATTTTATAACTATAATTTAAGACCCAAGTCATACTGTTATCTGGA 1917 0.4111 MLSFSICGFPSFSIRRAYPRISASFGIDSPQEPDSAKPHGSGAKLEEEFRKGNVSGAAIGRKKKAKEKVQWVCSNCGYSAGQWWGVCRSCSVAGTMKEVKFSGTDGMVSGFSVLEDGVGSWLPQQEGEMRPLRLAEVNRGLDIHHWRIPLTGPFGDEVSRVLGGGLVPGSLTLIGGDPGVGKSTLLLQIAAIIAEGQNDGESSPVVYVSGEESVEQIGNRADRLRIESDIYLYSSNDVEVDILKKVQYLSPGALIVDSIQTVYLKGLMGSPGGIMQIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSSYRMLRAVKNRFGSTDELGVFEMSHSGLQAVSNASEMFLSEQHLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGTREVNGIPLKRANMIISVLIKQAGLRIQEDAVFLNVVSGWSLTETAGDLAIAAAICSSCLEIPIPNDIAFIGEIGLGGELRMVPRMEKRVYTVAKLGFRMCIVPKVAEKALGTDGFEKMEVVGCRNLKEVINTVFPNIMKT 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00858 527 PRINTS DNA repair protein radA signature 73 97 - -
Pste6g00858 527 PRINTS DNA repair protein radA signature 160 188 - -
Pste6g00858 527 PRINTS DNA repair protein radA signature 310 336 - -
Pste6g00858 527 PRINTS DNA repair protein radA signature 275 303 - -
Pste6g00858 527 PRINTS DNA repair protein radA signature 385 408 - -
Pste6g00858 527 Gene3D - 356 527 IPR014721 -
Pste6g00858 527 Gene3D - 156 337 IPR027417 -
Pste6g00858 527 Pfam Rubredoxin metal binding domain 71 98 IPR041166 -
Pste6g00858 527 PANTHER DNA REPAIR PROTEIN RADA 42 522 - -
Pste6g00858 527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 331 IPR027417 -
Pste6g00858 527 Pfam Subunit ChlI of Mg-chelatase 398 491 - -
Pste6g00858 527 SUPERFAMILY Ribosomal protein S5 domain 2-like 317 521 IPR020568 -
Pste6g00858 527 FunFam DNA repair protein radA isogeny 355 524 - -
Pste6g00858 527 Pfam AAA domain 161 227 - -
Pste6g00858 527 ProSiteProfiles RecA family profile 1. 147 263 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Pste6g00858 527 SMART AAA_5 168 306 IPR003593 GO:0016887
Pste6g00858 527 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00858 Pste-Chr6 3333115 3352440 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00858 6 3333115 3352440 Pste6g00858 6 3333115 3352440 ECH
Pste3g03593 3 28229566 28247128 Pste6g00858 6 3333115 3352440 PCT