Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00829 TTCCCTTCACCGCGCTTTCTCTCTCTTGAGATCTGAATTCGCCGCCCCCTCCAAACCTCTCTTTCATCCAAACTTCTCTCTCCAATCCCTCCTCTCTCAGATCCCCCTTTTTCTTTTCTTTCTTCGTTTCTTTTTTCTTTTTTTTTTTGCGACCTAGGGCTTTCAATTACTTGCACCGTTTCCTTCTTTTTTTTGTGTCTCGGTTTCTTTTTCCTTCGTTCTAGGTTTCTGATTTCCCGTTCAATTTGGTTTTCCGGAGTGGGATGTGTCTGAATTCTCGATCCGTCCCTTTTCTTTTCCCTTAAATTTGATATCTTAGTGTCGGGCGTTGAGATCATGGGGAGCTCTGAAGGGGAGGGAGCATCGTCGAAGCAATATGGTGTCACAAAGCCCATATCAATTTCTGGCCCAACGGTTACTGATTTGCAGAGGACTCTTGAGTTAGAGAAGTTTCTCGATGGTTCGGGGCTTTATGAGAGCAGGGAGGAAGCCGCCAAAAGAAAAGAGGTTCTTCACCGACTTGGACAGATAGTGAAAAATTGGGTGAAGCAACTTACCCGACTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATCTTAACTTTTGGTTCCTATCGGCTTGGTGTTAGTATATTATCTCCTTGCTTGAAATACCTTCACATCTTGGTTCATGGTCCTGGGGCTGACTTAGACACTTTATGCATTGGGCCATCCTATGTAACCCGGGAGGAGGATTTTTTTTACACATTGCATGATATACTAGCTAACATGGATGAAGTAACAGAATTGCAACCAATTCCAGATGCTCATGTCCCAGTAATGAAATTCAAGTTTGATAGAATATCAATTGACCTCCTTTATGCCAGTATTTCTTGCTTGATTGTACCTGAAGACTTGGATATATCTGATGTCTCTGTTCTACACAATGTTGATGAGCCTACTGTGCGAAGTCTGAATGGCTGTAGGGTTGCAGATCAAATTCTAAAGCTTGTTCCAAATGTTGAGCACTTCCGTACAACACTTCGTTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTACTCTAATGTGACTGGCTTTCTTGGTGGTGTTAACTTGGCACTTCTGGTAGCTCGAGTGTGCCAGTTGTATCCTAATGCAGTTCCAAGTATGCTTGTTTCTCGATTCTTTAGGGTATATACACAATGGCGGTGGCCAACTCCTGTCATGTTATGTCCAATTGAGGAGAATGAGCTTGGGTTTTCTGTTTGGCATCCTCGTAAAAATCCCCGTGACCGATCCCATCATATGCCAATTATTACTCCTGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCTACAAGCACGCTTCGTGTAATGATGGAGCAGTTCGAATATGGGAACAAGATCTGTGGGGAAATAGAACTGAATAAAGCTTGTTGGAAAGCTCTGTTTGAACCATATAGTTTCTTTGAAAGCTATAAAAACTACTTGCAAGTTGATGTAGTTGCTGCTGATGTCGATGACTTGCGCAGCTGGAAAGGTTGGGTGGAATCACGCCTTCGGCAGCTGACTTTGATGATTGAACGTGATACTTTTGGGAAGTTGCAGTGCCATCCCTATCATCATGAGTATGTGGATACTTCAAGGCAGTGTGCACATTGTGCTTTCTTTATGGGTTTGCAGAGGAAACAGGGAGAGATTGTTCAAGAAGGTCAGCAATTTGATATACGAGGGACAGTTGAAGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAAACCGGGGATGGAGATTTATGTTTCTCATGTTCGTAGAAGGCAAATTCCATGCTATGTGTTTCCTGGTGGTTATAAACGATCCCGACAGTTAAAGCCCACATCACAACCTGATAATCATAAATCATTTCATAAAGATGAGATTGAGAGAGTCCGTAAGAGGAAGAACAATGATGGGGTGTGCTTGAGGGAGGATGCTGTTCTGAAAAGGCAATCTGTTAGTGCTCCTGGTGATAGTTTGGCTAGGTACAGCCTTGGTACTGGTGTTTTGTCTGCTGGTGTTGTATCTGATAGTCAAGAGTTGAGAAATGTGGAGTGCAATCGATTGGTGAACAGTGGGCAAGAAGAGTTGGATAGAACAGAGTCTCCTGAACCTGGCTCAAATTCTAGTGTGGTTACATCTGTTACAAGTGATGGTGGTTCTTCTGAAGATATTGGGTCTTCATCTGTGGTACGTTGTGTTGAGGACAGCACCAGGGTTGTTGAAATGAACAATTGCTCAGAGTATACTACATTTGGGAGTGATTCTGTCACACTGGTGAAAAATATAGTGGCAAATGGAAATGAAGTATTTCAACATGAGCTACAGGACAAGTTGCAGCCAAATGCAATACTAGGGATGGTTCTTGATTCTGCAGAAAAGGTTCTTTCAGAAGCTGTGCAAGAGCCGGTGATAAGGCACGATCTTAGCTTTTCTGTGGCTATTTTTTTGTCTTTATGCCCGTTTCGTGATTTGATGTATGACAGGAGATTGAGTTTAGCATCAACGATTAGTAGCATGTGTGGAAGTGGACAATTTGGCAGTGGAGAAAACAGGAGAGCCAGCAACATGGCTTGCTTGGCCGTTCAAGCTTGTAAATTGGAACTGATCCGCATCAAGCTGAAGAGGTGGAGCTGGGATTTATCCGCCCTTTGTACACTAGGACCGGGGGAGGGTGGGGGATTTGATTGGCTAGCTATCAGAGGGGACTTAGTTAGCAGCAACATTATAATGAATATTCTTGTACTTGCCTCTCAGAGGTTAGCTTATAAATTTGACAGTGATATGGCAACTTTGATCTCAACCTTCTCTTCAATTCTTGCCTTCTCGCCTGCT 2871 0.4302 MGSSEGEGASSKQYGVTKPISISGPTVTDLQRTLELEKFLDGSGLYESREEAAKRKEVLHRLGQIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVSILSPCLKYLHILVHGPGADLDTLCIGPSYVTREEDFFYTLHDILANMDEVTELQPIPDAHVPVMKFKFDRISIDLLYASISCLIVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFSVWHPRKNPRDRSHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFEYGNKICGEIELNKACWKALFEPYSFFESYKNYLQVDVVAADVDDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEYVDTSRQCAHCAFFMGLQRKQGEIVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFPGGYKRSRQLKPTSQPDNHKSFHKDEIERVRKRKNNDGVCLREDAVLKRQSVSAPGDSLARYSLGTGVLSAGVVSDSQELRNVECNRLVNSGQEELDRTESPEPGSNSSVVTSVTSDGGSSEDIGSSSVVRCVEDSTRVVEMNNCSEYTTFGSDSVTLVKNIVANGNEVFQHELQDKLQPNAILGMVLDSAEKVLSEAVQEPVIRHDLSFSVAIFLSLCPFRDLMYDRRLSLASTISSMCGSGQFGSGENRRASNMACLAVQACKLELIRIKLKRWSWDLSALCTLGPGEGGGFDWLAIRGDLVSSNIIMNILVLASQRLAYKFDSDMATLISTFSSILAFSPA 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00829 845 FunFam Putative poly(A) polymerase gamma 201 371 - -
Pste6g00829 845 MobiDBLite consensus disorder prediction 603 629 - -
Pste6g00829 845 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 374 502 IPR011068 GO:0003723|GO:0016779|GO:0031123
Pste6g00829 845 Pfam Poly(A) polymerase predicted RNA binding domain 375 434 IPR007010 GO:0003723|GO:0043631
Pste6g00829 845 CDD NT_PAP_TUTase 54 223 - -
Pste6g00829 845 Gene3D Poly(A) polymerase predicted RNA binding domain 375 491 - -
Pste6g00829 845 Gene3D - 15 371 - -
Pste6g00829 845 MobiDBLite consensus disorder prediction 592 629 - -
Pste6g00829 845 PANTHER POLY A POLYMERASE 6 528 - -
Pste6g00829 845 Gene3D Beta Polymerase, domain 2 47 217 IPR043519 -
Pste6g00829 845 FunFam Poly(A) polymerase alpha, putative 47 217 - -
Pste6g00829 845 SUPERFAMILY PAP/OAS1 substrate-binding domain 224 373 - -
Pste6g00829 845 Pfam Poly(A) polymerase central domain 15 373 IPR007012 GO:0043631|GO:1990817
Pste6g00829 845 SUPERFAMILY Nucleotidyltransferase 14 222 IPR043519 -
Pste6g00829 845 FunFam Nuclear poly(A) polymerase 4 375 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00829 Pste-Chr6 3202307 3207614 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00829 6 3202307 3207614 Pste6g00829 6 3202307 3207614 ECH