Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00731 TGCAATTGCAAGCCACCCTAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGCGAGGAGAGGCGAGGCGGTGCATGGACACACAAATGACTCTCCCTTCTCACGATGCTTGGATTCGCACTTCCCACACCCTCCTCCCCACATGGAAATCTCTTTCCCTCTCTCAACAGTCAAATGTTCCCATTTCTATATCAAGAGTTAACCAAGTTGATGCGGCACGATTGGACGTTGAAATGTCAGCCATGTTGAAAGAGCAATTGGTTAAAGTGTTCTCTTTAATGAAGGTACAGTTATGTATGACTTACTATAGTATAGTACTGTCACTTACTATGAAAAAGCCAGGAATGTTATTCCAGTATGAGGCGGAGCTTGATGCTTTCCTGGAGTTTCTTATTTGGAGGTTCTCAATTTGGGTCGATAAGCCAACCCCTGGCATAGCTCTCATGAACCTGAGGTACAGAGATGAACGTGCATTAGAACCAAGAGGTAAAGTCAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGATTTGGTATTGTGTTGCCACTGTTGGTGGTCAATATATATGGGCTCGGTTACAATCTTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCATTGGCACGACGCTTATGGATCTTGATACAACGAATAGAAGGAATTTATAGAGCTGCATCATTTGGAAACCTGTTGATATTTCTTTGCACAGGAAGATATCGAAATCTTATTGAAAGAGCCTTACAAGCTAGGCTTGTATATGGGAGTCCAAATATGAATCGTGCTGTCAGCTTTGAATATATGAATCGGCAATTAGTTTGGAATGAATTCTCGGAAATGTTATTGTTGCTTCTTCCACTTCTTAATTCATCATCTGTGAAAAACCTCCTACGACCTTTTTCTAAAGATAAATCATCAAATTCAGACGAGGATGGCACAGCATGTCCCATTTGCCAGGCTACTCCAACCATTCCTTATGTTGCTCTACCTTGCCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCAGTTGTTGCTATGCAACGGCATGGTGGTCTCCCCACAGAATGATAGATTGTTACTGAGGAACCAGGAAACGATTTTAGAGTTAGGAAGCATTTGATCTTTTACTTACAGAATTAGCATATATATAAAATACTGCCTGAAATTGTGGTGGTATTCTTTTCCCCTTTCTTTCTCTTTAGTTGGTTTCTCGCTTATTATTCACATTTAATTGGGGAAACAAATCAAATTTCTTCATAGCATAACTTACTCGGTTGAGTGGGAAGCATTCTTTCCCTTGTATCAATGTATCATTTAGTTACGTCTCAATTAAAAAAATATAAAATTGTAAGTTTGTTGAGTTT 1438 0.4096 MDTQMTLPSHDAWIRTSHTLLPTWKSLSLSQQSNVPISISRVNQVDAARLDVEMSAMLKEQLVKVFSLMKVQLCMTYYSIVLSLTMKKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERALEPRGKVRTGLEGPGLTVAQKIWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSNSDEDGTACPICQATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRHGGLPTE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00731 351 Pfam Zinc finger, C3HC4 type (RING finger) 295 335 IPR018957 GO:0046872
Pste6g00731 351 SMART ring_2 295 335 IPR001841 -
Pste6g00731 351 SUPERFAMILY RING/U-box 289 341 - -
Pste6g00731 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 346 IPR013083 -
Pste6g00731 351 Pfam Pex2 / Pex12 amino terminal region 51 273 IPR006845 -
Pste6g00731 351 CDD RING-HC_PEX2 293 339 IPR045859 -
Pste6g00731 351 PANTHER PEROXISOME BIOGENESIS FACTOR 2 3 348 IPR025654 GO:0005778|GO:0007031|GO:0008270|GO:0016558
Pste6g00731 351 ProSitePatterns Zinc finger RING-type signature. 311 320 IPR017907 -
Pste6g00731 351 ProSiteProfiles Zinc finger RING-type profile. 295 336 IPR001841 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00731 6 2785778 2790148 Pste6g00731 6 2785778 2790148 ECH