Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00617 ATGCTACTAATGGAGGATCACAACAACAAAGGAGAAGTTCATGCAAATTTAACTAAACAGGAGCAGTCTTTATCAAGATCAGGTATCAGTTTTAAATCTACTTTATCTGGAATATCAACAAGACAAAATTCTCCTTCATTTCAGCAACCACATTCTACCTTAACATCAAGAAGAGAAAGCAAGGGTGTTGCACAGTGCTATGGGAGCAACCGTTTGTTGTTGTGGCTGTTTCTGATTACCCTTTGGGCTTATCTTGGATTTTGTGTTCAGACTAGGTGGACACACGATGATAGGGAGGAGGAATTTTCAGGCTTTGGAAGAAGGCCAAGTGATACAACAAACTATGTTGAACAGAATCAGTATCATGATTTGATTGCCAAAAACATTTCCTTATCCGTTAATATTGAATTAGTTGGGAACAAAACAATGGACGTGGCTTTGGTAAACAAAGAATACGGTGTTCTATCTCAACTTAAGGCTAGCTCTAGGAAAAGGAGAAGGCGATCAGTGCATGCTTTGAGAGGTAAGAACAGGCAAAAACATAAACTTGAGAGCAGTGGTATAGAGGAGCAGGAGTTAGAAATTCTCCAAAGGAATTATACCTATGGATTCCTTGTTGGTCCATTTGGCTTAACAGAGGATAGAATTCTGCAATGGAGTCCTCAGAGGCGTTATGAAACCTGTGACAGGAAAGAGGACTTTGCTCGCCTTGTTTGGTCAAGAAGGTTTGTTTTGATATTTCATGAGCTTTCCATGACTGGGGCTCCGCTTTCAATGATGGAGTTGGCAACTGAACTCGTGAGTTGTGGGGCTTCTGTGTCATCTGTGGTGCTCAACAGGAAAGGTGGTTTGATGCAAGAACTCGCTAGGAGAAAGATCAAGGTGCTTGATGACAAAGCATATCTCAGCTTCAAAATTGCAACCAAGGCAGATCTTGTCATTGCTGGATCAGCTGTCTGTGCATCATGGATTGAACAATACATTGAACATTTTCCCGCTGGTGCGAGTCAAGTTGCTTGGTGGATTATGGAAAACCGACGAGAATACTTTGATCGTGCAAAGGATGTGTTGCACAGAGTGAAGGCATTGATTTTTCTTTCTGAATCACAATCTAAGCAATGGCAAACATGGTGTGAAGAAGAGGGCATAAATCTGAGGTCACAGCCTGAAGTCGTTCCTTTATCTGTTAATGATGAACTAGCTTTTGTATCTGGCATTCGCTCTACACTAGACACTCTATCCTTCAGTGCTGCGAACATGGATGAGAAGAGGAAGTTGTTGCGAGATTCTATCCGAAGAGAAATGGGGTTGAATGATAATGATATGCTTGTTATGACTCTTAGTAGCATCAACCGTGGGAAGGGTCAGCTATTGCTTCTTGAATCAGCACGCTCGATAGTACAATATGGACCATTGCAACATTATAAGAAAATGCAGAAGTCATCAGATGATGGAGAATACCTATCTACCCTGGCTAGACTTAGGAGGCCTCATATTAGAGAACTGTTAAAGGATAGCAGTGTAGCATTGAGCAATATCTCCAGCAATTTTATTACCAGAACAAGGGAATCTTTGTCCCACAACAATGGAACAATGGCACAATCTCTCAAAATTCTCATTGGTTCTGTGGGATCTAAGAGTAACAAGGTGGATTATGTTAAAGGTCTTCTAAGTTTCTTAGCAAGGCATTCAAACTTGTCAAGGTCAGTTTTGTGGACCTCAGCCACAACACGTGTTGCCTCACTTTACTCTGCGGCAGATGTTTATGTTATAAACTCTCAGGGATTGGGAGAAACATTTGGACGGGTGACTATAGAAGCCATGGCATTTGGTCTTCCGGTGCTTGGAACGGATGCTGGGGGAACGCAAGAAATTGTTGAGCATAATGTGACAGGTCTCCTTCATCCTATTGGACGTGCAGGGAATCATGTCCTTGCACAGAATTTGCGGTTTTTACTTGAAAATCGACTGGCAAGAGAGCAAATGGGGTTGGAAGGAAGAAAGAAGGTGCAGAGGATGTTCTTGAAGCAGCACATGTATGAGAAATTTGTAGAGGTTCTTGTCATGTGCATGAAAAGCAAATAA 2085 0.4182 MLLMEDHNNKGEVHANLTKQEQSLSRSGISFKSTLSGISTRQNSPSFQQPHSTLTSRRESKGVAQCYGSNRLLLWLFLITLWAYLGFCVQTRWTHDDREEEFSGFGRRPSDTTNYVEQNQYHDLIAKNISLSVNIELVGNKTMDVALVNKEYGVLSQLKASSRKRRRRSVHALRGKNRQKHKLESSGIEEQELEILQRNYTYGFLVGPFGLTEDRILQWSPQRRYETCDRKEDFARLVWSRRFVLIFHELSMTGAPLSMMELATELVSCGASVSSVVLNRKGGLMQELARRKIKVLDDKAYLSFKIATKADLVIAGSAVCASWIEQYIEHFPAGASQVAWWIMENRREYFDRAKDVLHRVKALIFLSESQSKQWQTWCEEEGINLRSQPEVVPLSVNDELAFVSGIRSTLDTLSFSAANMDEKRKLLRDSIRREMGLNDNDMLVMTLSSINRGKGQLLLLESARSIVQYGPLQHYKKMQKSSDDGEYLSTLARLRRPHIRELLKDSSVALSNISSNFITRTRESLSHNNGTMAQSLKILIGSVGSKSNKVDYVKGLLSFLARHSNLSRSVLWTSATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTQEIVEHNVTGLLHPIGRAGNHVLAQNLRFLLENRLAREQMGLEGRKKVQRMFLKQHMYEKFVEVLVMCMKSK 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00617 694 Gene3D Glycogen Phosphorylase B; 415 674 - -
Pste6g00617 694 PANTHER BNAA05G14870D PROTEIN 4 694 - -
Pste6g00617 694 Pfam Glycosyl-transferase family 4 239 407 IPR041693 -
Pste6g00617 694 MobiDBLite consensus disorder prediction 1 59 - -
Pste6g00617 694 Pfam Glycosyl transferases group 1 557 668 IPR001296 GO:0016757
Pste6g00617 694 MobiDBLite consensus disorder prediction 15 59 - -
Pste6g00617 694 CDD GT4_PimA-like 242 687 - -
Pste6g00617 694 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 246 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00617 Pste-Chr6 2311713 2315285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00617 30 692 Glycosyltransferase AT3G15940 59.649 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00617 6 2311713 2315285 Pste6g00617 6 2311713 2315285 ECH
Pste3g03667 3 28970606 28975172 Pste6g00617 6 2311713 2315285 PCT