Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00580 ATGTCTCGAAGATATGATAGCCGTACAACAATCTTCTCCCCTGAAGGACGTCTTTACCAAGTGGAATATGCAATGGAGGCTATTGGGAACGCTGGTACTGCAATAGGGATCTTATCAAAAGATGGGGTTGTGTTGGTTGGTGAAAAGAAGGTCACATCCAAGCTGCTCCAAACGTCAACTTCCACCGAGAAAATGTACAAGATTGATGATCATGTTGCATGTGCTGTTGCTGGAATAATGTCTGATGCCAACATCTTAATCAACACCGCCAGGGTGCAAGCACAACGCTACACATACGCCTATCAAGAACCCATGCCAGTTGAGCAATTAGTTCAGTCTCTCTGTGATACCAAGCAAGGTTACACCCAATTTGGTGGTCTTCGGCCATTCGGGGTCTCATTCCTGTTTGCAGGATGGGACAAGAATTTTGGCTTTCAGCTTTACATGAGTGATCCTAGTGGAAATTATGGTGGCTGGAAAGCTGGAGCCATTGGTGCAAATAACCAGGCAGCACAGTCAATACTGAAACAGGACTACAAGGATGATATCACAAGAGAAGAAGCAGTGCAACTTGCATTGAAGGTTTTGAGTAAAACCATGGACAGCACAAGTCTGACCTCAGAAAAGCTTGAACTTGCAGAGGTTTTCTTGTCCCCCTCTGGAAAAGTCAAGTATGAAGTTTGCTCCCCGGAGTCCCTGACAAAGCTTTTGGTCAAGCATGGTGTAACACAACCTGCAACTGACACTGCCTAG 753 0.4555 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAGAIGANNQAAQSILKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSPSGKVKYEVCSPESLTKLLVKHGVTQPATDTA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00580 250 Pfam Proteasome subunit A N-terminal signature 5 27 IPR000426 GO:0006511|GO:0019773
Pste6g00580 250 ProSiteProfiles Proteasome alpha-type subunit profile. 20 237 IPR023332 -
Pste6g00580 250 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 249 IPR029055 -
Pste6g00580 250 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 219 IPR029055 -
Pste6g00580 250 ProSitePatterns Proteasome alpha-type subunits signature. 5 27 IPR000426 GO:0006511|GO:0019773
Pste6g00580 250 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 9 221 - -
Pste6g00580 250 Pfam Proteasome subunit 30 214 IPR001353 GO:0005839|GO:0051603
Pste6g00580 250 CDD proteasome_alpha_type_4 3 215 - -
Pste6g00580 250 SMART Proteasome_A_N_2 5 27 IPR000426 GO:0006511|GO:0019773
Pste6g00580 250 FunFam Proteasome subunit alpha type 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00580 Pste-Chr6 2179348 2180100 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02017 5 12804114 12807264 Pste6g00580 6 2179348 2180100 PCT