Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00564 ATGGCTCCGGCGCCGGTGAAAAACCTAGTGGTGTTGGTGTCAGATAGCAAAGAGGTCGTTACCGGTTGCCGTGCTTCTTTGGCGGCGACGGCGGATATGGCAAAGGGATGGCAATGCTTCTTCGAGAAGCTTCGGAGGTGCGTTCGGACGGTCTTCTTCGTGGTGGCATTGGTGGCATCGCTGGCTGTCACGTCGCTGCCGGTTGTCGTCGCGGTGGTGGACGTGTTGGTGCCGTGCGTTTTGATCTCGAGCTTCACTTGCGTCAAGTGTTACAGCATCAAGGAGCATTTTAACCGTTACGCTTTCAAGAGTTCCTTGATGGATATTCCTCTCGTTTCGGTCATAAGATCCCTTATCATTCTATGTGTTTATTCGGTTTGTGATGCTCCTGCTCTTTCCCATGGCCCTTACCTTGGAACTGTGACTCTGTGCTCCTTTCTGTCAATTGTTCTGCTTTCGGTCAAAGCTTGTGTTTTCACTGTAAATTCCCATATTGAAGCAGAGGCTTCGGTTTCCTTCAGAAAGCAGAGACTCCATTTGAAGAAGCCATGGGGAATGCCTGTCTTGTTTCTTTCATCAGTTGTGTTTGCCCTTGGCCATACTGTGGTTGCATATAGAACAAGTTGCAGAGCACGCAGAAAGCTCATGTTTCATAGAGTTGACCCCGAAGCTGTTCTATCATGCAAAAATGTTTTCTCAGGCTATGCAAAGGTCCCACGATCTCCAACTCCTTCTGCTGGGAGAACCCCTAAAAGTGATTGTGAGATGAGGAGGAGACCTTTTGGGACAGCTCGTGATGAAGAACTGCTCGTCAGATTACTTGCAAACTCAGACAGCTTGTTCATTACATGCCAAGGACTTACACTCCATTACAAGCTCAGCTTGCCTGGTTCACCACCACATACATTGTCTTCAATGTGCAGCATCGAGTCTAATTCTAGTTGCAGCACTTCATCAATGGCTGCAGGATTCACAAAATATAATAAACATTTACCAAGTACATCTCCAAATATCCAGCCACAGCTATACAGAAGCTTTAGCAATCAATTCCATGGTTCATCTCTGCATGTTCCTCTATTGGATGGTCCGATAACTTCTATTATTTCTGAAGATATGCCTGTTTTTCACCTAGATGGTGTTTGTGAAGATAAAACTAGTAAATTGAATTTTCAATTTCTAGATCAAGATTTAGAGAGTATTGGCCAATTAGGTATTGTTTTAGTACACGGGTTTGGAGGAGGAATCTTCTCTTGGAGGCACGTGATGGGATCTCTAGCTCGTCAGAGTAATTGCACAGTTGCAGCATTTGATAGGCCTGGTTGGGGATTAAGCTCAAGGCCTCGCCGGGAGGACTGGGAGGAAAAAGAGTTGCCTAATCCTTATAAGCTTGAAAGTCAGGTTGACCTGCTTTTGTCATTCTGTTCTGAGATTGGATTTTCTTCTGTGGTGCTAATTGGTCATGATGATGGAGGGTTGCTTGCGTTGATGGCTGCGCAAAGAATTCAAACCTCAATGAATTATTTCAATGTTAATGTGAAAGGGGTCATATTGCTAAATGTTAGCTTGTCAAGGGAAATGGTTCCTTCTTTTGCAAGAATCCTGCTGCATACCTCACTTGGAAAGAAGCATTTGGTTCGCCCTCTACTAAGAACAGAAATCACCCAAGTGGTGAATCGGCGTGCTTGGTATGATTCAACCAAAATGACAGCAGAAGTTTTGACTCTGTATAAGGCTCCACTGTCTGTTGACGGATGGGATGAGGCCCTTCATGAGATTGGTAAATTGTCATCTGAAACCATCCTTTCAGCTAAAAATGCAGAATCATTGTTACAAGCTATAAAAGACATCCCAGTGTTAGTCATTGCTGGTGCTGAAGATTCCCTTGTGTCTTTGAAATCTTGTCAAGCTATGGCCTCAAAACTTGTTAATTCTAGATTGGTTGCTATATCTGGATGTGGCCATTTACCCCATGAAGAGTGTCCGAAAGCATTGCTTGCTGCAATCTCACCTTTCATCAATAGACTCCTGTCTGCATCTGACTCACAAAACCAATAGGTTCATTTGAAAGCTGATTATAGATAGGGTTATCTATTGTAAGGGTCTACAATCTTACTTTCCTTTTTCCATCTTTATTTTGGTTTCCTGCCCCCTCCCGTTTCTTTCTAAATAGTCCTTCAAGAGAGAGACTAAAAGATCATCTCTTCTCTGGGGTGTTTTTGACGTGCTAGTTTTAGGGGTTTTAACCTGTCTGTATCTTCGCCATTTTCCCCCTCTTTTTAAGCTGTCAATATTATGTTCCATTTCATCAGTTTGTCATTTTTCCCACTTAAATGTGTGGTTGAGACAATACACATTTGTAAATTCATC 2367 0.4343 MAPAPVKNLVVLVSDSKEVVTGCRASLAATADMAKGWQCFFEKLRRCVRTVFFVVALVASLAVTSLPVVVAVVDVLVPCVLISSFTCVKCYSIKEHFNRYAFKSSLMDIPLVSVIRSLIILCVYSVCDAPALSHGPYLGTVTLCSFLSIVLLSVKACVFTVNSHIEAEASVSFRKQRLHLKKPWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLMFHRVDPEAVLSCKNVFSGYAKVPRSPTPSAGRTPKSDCEMRRRPFGTARDEELLVRLLANSDSLFITCQGLTLHYKLSLPGSPPHTLSSMCSIESNSSCSTSSMAAGFTKYNKHLPSTSPNIQPQLYRSFSNQFHGSSLHVPLLDGPITSIISEDMPVFHLDGVCEDKTSKLNFQFLDQDLESIGQLGIVLVHGFGGGIFSWRHVMGSLARQSNCTVAAFDRPGWGLSSRPRREDWEEKELPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRIQTSMNYFNVNVKGVILLNVSLSREMVPSFARILLHTSLGKKHLVRPLLRTEITQVVNRRAWYDSTKMTAEVLTLYKAPLSVDGWDEALHEIGKLSSETILSAKNAESLLQAIKDIPVLVIAGAEDSLVSLKSCQAMASKLVNSRLVAISGCGHLPHEECPKALLAAISPFINRLLSASDSQNQ 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00564 684 PANTHER HYDROLASE 185 679 - -
Pste6g00564 684 Gene3D alpha/beta hydrolase 398 678 IPR029058 -
Pste6g00564 684 PRINTS Epoxide hydrolase signature 484 497 IPR000639 GO:0003824
Pste6g00564 684 PRINTS Epoxide hydrolase signature 409 427 IPR000639 GO:0003824
Pste6g00564 684 PRINTS Epoxide hydrolase signature 616 632 IPR000639 GO:0003824
Pste6g00564 684 PRINTS Epoxide hydrolase signature 649 671 IPR000639 GO:0003824
Pste6g00564 684 SUPERFAMILY alpha/beta-Hydrolases 405 674 IPR029058 -
Pste6g00564 684 Pfam Alpha/beta hydrolase family 405 666 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00564 Pste-Chr6 2096564 2101524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00564 33 680 Miscellaneous Gene Families AT1G80280 63.746 0.0 800
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00564 6 2096564 2101524 Pste6g00564 6 2096564 2101524 ECH
Pste3g03700 3 29241228 29245892 Pste6g00564 6 2096564 2101524 PCT