Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00562 AGAGTTGAGAGGAGGGAAGAAAAGGGGGAGAACGTTACATCGAAATCCAAATGCGCAGCGCGCACGTTAGAGAGAAGCGAAGATGGGTTCTCTTCTGTGGGTATTCGGATCCACGACAACCCCGCCCTCGAATTGGCTTGTTCTGGCGCCTCTCATCTCTACCCTGTGTTCGTGATCGACCCGCATTTCATGCAACCCGACCCGAATGCATACTCAGCCGGGTCATCGCGCGCGGGTCTGAACCGCATCAACTTCTTACTGGAGAGTCTGGTTGACCTTCATCGCAATCTCCTCAAGCTTGGGTCCCGACTTTTGATTCTCAAAGGTGACCCGGCCCAAGTTATCATTCGATGTTTGAAACAGTGGAATGTCAATAAGCTATGCTTTGAGTACGACACTGAACCCTATTATCAGGCTCTTGATCTTCAAGTTAAGAACTTTGCACTTGCTGCTGGAATTCAGGTTTTCTCTCCTGTAAGTCACACACTCTTCAATCCCACCGATATTATTAACAAGAATGAAGGGAAGCCACCCCTTAGTTATCAATCGTTTGTTAAGCTTGCTGGGGAACCGCCATCTCCTTTATCAACTGTCTATTCTTCACTTCCTCCAGTTGGGCATCTTGGAAGTTTTGATATTTTTGAAGTTCCTACAATCAAAGATCTTGGGTATGAAGATGCCGAACAGGATGAGTTCTCTCCTTTCAAAGGTGGTGAGTCAGAAGCATTGAAGAGGTTGGATGAATGCATGAAAGACAAGAAGTGGGTGGCAAACTTTGAGAAACCCAAGGGCAATCCATCTGCATTTCTTTACCCAGCAACAACTGTTTTATCACCATACCTGAAATTTGGTTGTCTCTCTTCCAGATATTTCTACCAGCGCATTCAAGATGTGTATAAGATTATGCCAAAACATACTTCACCGCCTGTTTCTCTTATAGGACAGTTGTTGTGGCGAGACTTCTTTTACACGGCTGCTTTTGGGACTCCAAATTTTGATAGGATGAAAGGCAATAGAATATGCAAGCAGATTCCTTGGAAGGATGATCATAAACTGCTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGATCCAGTTACGCAAATGGGGTTGGGTGCATCATCTGGCACGACATTCTGTTGCGTGTTTTCTAACAAGAGGGGATCTGTTTGTTCATTGGGAAAAAGGACGAGATGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTTTCTTGTTCATCTTTCTTTTATCAAGCTTCTGAAACTTCAGTGAAAAGTGACTATATTAAACTGGATTATAACCGTATTTATTCCCCAATCACATTTGGTAAGAAGTATGACCCTAATGGCGACTATATTAGGCATTTTCTCCCAGTCTTAAAAGATATGCCCAGGGAGTACATTTATGAACCCTGGACGGCTCCTAAAAGCATTCAGACCAAAGCAAATTGCGTAATTGGCAAAGACTACCCCGTGCCAGTTGTTTCTCATGATTGTGCGAGTAAAGAGTGCCGAAGGAAAATGGGCGAGGCATATGCATTGAGTAAAGAATTGAATGGTTTGGTTAGTGAAGATGATCTGAAAAACTTGAGGAGGAAATTAGATGAGAATGAAGGGCAAGCGCCTGGAACCAAAAGATATAAGCAACAGCTGATTGGCTGAGCCAAAGTTTTACAAGTATTTTCAACTGCCATGCCTTGAGTTGCAGTTTATATAATGTCAGGGATATTTTTGCATTATCTAGACATTTGTATGACACATGTAGACATATAGACTTCCCCAATTAACATTATGGATCTTTTTACTTATTTTTTTGTGATTCTGGTATGGAACATTATATTTTGCATCCATAGCAAATTATACGGTGAAACTTTCATCAAAAGACATTGGAAAAATGTGTTCTTGAGGTTATTATACGAACACATTACAACATTCCCC 1986 0.4225 RVERREEKGENVTSKSKCAARTLERSEDGFSSVGIRIHDNPALELACSGASHLYPVFVIDPHFMQPDPNAYSAGSSRAGLNRINFLLESLVDLHRNLLKLGSRLLILKGDPAQVIIRCLKQWNVNKLCFEYDTEPYYQALDLQVKNFALAAGIQVFSPVSHTLFNPTDIINKNEGKPPLSYQSFVKLAGEPPSPLSTVYSSLPPVGHLGSFDIFEVPTIKDLGYEDAEQDEFSPFKGGESEALKRLDECMKDKKWVANFEKPKGNPSAFLYPATTVLSPYLKFGCLSSRYFYQRIQDVYKIMPKHTSPPVSLIGQLLWRDFFYTAAFGTPNFDRMKGNRICKQIPWKDDHKLLEAWREARTGFPWIDAIMIQLRKWGWVHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQASETSVKSDYIKLDYNRIYSPITFGKKYDPNGDYIRHFLPVLKDMPREYIYEPWTAPKSIQTKANCVIGKDYPVPVVSHDCASKECRRKMGEAYALSKELNGLVSEDDLKNLRRKLDENEGQAPGTKRYKQQLIG 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00562 569 Pfam DNA photolyase 35 187 IPR006050 -
Pste6g00562 569 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 224 528 IPR036134 -
Pste6g00562 569 Gene3D HUPs 32 160 IPR014729 -
Pste6g00562 569 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 35 210 IPR036155 -
Pste6g00562 569 PANTHER CRYPTOCHROME 34 530 IPR002081 -
Pste6g00562 569 Pfam FAD binding domain of DNA photolyase 313 524 IPR005101 -
Pste6g00562 569 Gene3D - 161 328 - -
Pste6g00562 569 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 330 568 - -
Pste6g00562 569 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 25 163 IPR006050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00562 Pste-Chr6 2083833 2092252 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00562 6 2083833 2092252 Pste6g00562 6 2083833 2092252 ECH