Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00554 CCCCTTCATCCCTTGACACACTTCACTGGTGGGAGTGGGAGTGTTGTGAATAGTTAGTGATAGCAAAATGAGCTATGCACATTATCACACGGGATCTGGTAGTAGAACTGCTCGGAGAAGTTTGGAGTTTGGGAAAACCCATGTCGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGAGACAATGGTTTGAGCTCGTATCAGCTGCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCCACTGCTCCTACCCGCCCTGTAACCATACTTGGTGGTTTTTCTTGCACTGCATGGTTTGATATGGGAGAACTTTCAGAAGATGGTCCAGATGATTGGGAGGTGAAAGTAGGAATCGGAGGCTTCAGTATGGGTGCCGCAGTAGCTCAATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCTTACCCTGTCAACTTAAGGGCAGTTGTTGGACTCAGTGGTTGGCTTCCAGGGTCAAGGAACTTAAGGAACAAGATTGAAGTGTCACATGAAGCAAGAAGGCGAGCTGCTTCTTTACCTGTTTTGCTGAGCCATGGAATCAGTGATGATGTAGTCCTCTACAAATACGGAGAGAAATCAGCCCAATCCTTAAGTTCAGCAGGGTTTCGATACATTACATTCAAATCCTACGATGGGCTTGGCCATTATACTGTTCCTAGGGAGATGGATGAGGTCTCCAATTGGCTTAACTCAAGGCTGGGGCTTGGAGGATCCTCATGAATGGTTCTCCAGCATATACAATATGGTATTGGTATAGATAGTAGCAGGAATAATCTTCAGCGAGTTGCTTTAGTCATGTTGCGAGAATAAAAATATGAATGTGTTTTTTAAGTAGTTCTTTCCCTTTGTATTATCATAGTACCTAGAGACAGGGTCAGCGGAACGCTTGGAAAGATTTTGTTTTAGTTATTGTAACTATATAGGGTACTTAGCTATGTTATTACTTATTTCTCAATTTCAGAGTGCTTTCTTCTTTTTTGGGGGGGATTTTACAATGCCTGCATGGAAGTTTGGAGCTAGGAAATCCTGCAAACTATGTGTTTGTTTCTGGACAGCATACATTCCAATGCACGTTGAAACTTGA 1145 0.4332 MSYAHYHTGSGSRTARRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDWEVKVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRNLRNKIEVSHEARRRAASLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMDEVSNWLNSRLGLGGSS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00554 237 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 236 - -
Pste6g00554 237 SUPERFAMILY alpha/beta-Hydrolases 25 231 IPR029058 -
Pste6g00554 237 Pfam Phospholipase/Carboxylesterase 24 96 IPR003140 GO:0016787
Pste6g00554 237 Pfam Phospholipase/Carboxylesterase 103 228 IPR003140 GO:0016787
Pste6g00554 237 Gene3D alpha/beta hydrolase 17 232 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00554 Pste-Chr6 2063886 2067367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00554 3 236 Acyl Lipid Metabolism Gene Families AT3G15650 67.984 2.06e-111 319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00554 6 2063886 2067367 Pste3g03712 3 29339083 29342693 ECH
Pste2g00219 2 1203922 1214676 Pste6g00554 6 2063886 2067367 ECH
Pste6g00554 6 2063886 2067367 Pste6g00554 6 2063886 2067367 ECH
Pste3g03712 3 29339083 29342693 Pste6g00554 6 2063886 2067367 PCT