Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00507 TTGGGGGATAAAATATTCACAGGAACATATGGAGTAAACTACGGTAGGATAGCAGATAATCTACCGTCTCCTGACAGTGTGGTTACCCTTCTGAAAGCTGCGAAGATAAGGAACATCAGAATATATGATGCTGATCATAAAGTTCTGAGTGCCTTCAAAGGTTCAGGGATTGCAATTATTATTGGTCTACCAAATGAGTTTCTGAAAGACGTAAGTGTTGGGGAGGATCGTGCGATGAATTGGATAAAAGAAAATGTTGAGCCATTTCTTCCAGGAACCAGAATTCGTGGGATTGCGGTGGGGAATGAGATATTGGGAGGCGCAGATATGGAGCTATGGGAAGTTTTGTTATCAGCAGCTAAAAATGTGTACACAGCCCTTGATAGGCTTAACTTAGCACATCAAATTCAGGTGTCTAGTCCACATTCAGAAGCTGTGTTTGCAAATTCCTTCCCTCCATCTGCATGCACTTTTAGGGAGGATGTGCTCCCTTTCATGAAACCTCTCTTGCAATTCTTCTCACAAATTGGCACTCCTTTTTACATAAATGCATACCCCTTCTTGGCCTATAAGAATGACCCTCAACACATTGACATTAACTACGCTCTCTTCAAGAAAAATCCTGGGATTTATGATGCCAAGACTAAGCTACACTATGATAACATGTTTTTAGCCCAAATTGATGCTGCTTATGCAGCCTTGGATAAGCTTGGCTTTGACAAGATGGAGGTCATTGTTTCCGAGACTGGTTGGGCTTCTAAAGGGGATGACAATGAACCTGGCGCAACACTCAAAAATGCTAAGACTTACAATAAAAACTTGCGCAAGCTACTCCTCAAGAAAAAGGGCACCCCTTACAGGCCCAAGATGGTTGTCAGGGCTTATATTTTTGCCTTGTTTAATGAAAATCTAAAGCCTGGCCCAACATCTGAGCGAAACTTTGGATTGTTCAAGCCAGATGGGAGCATTTCATATGACATTGGCTTCACTGGACTTGTTTCTTCCTCAGCAACCTCGTCTTTTCTTTCCTTCAAGGGTATTGCTTCTTTCTACTTAATACTGGTTTCAACTAGTTGTGCGGCTTTTCTTTTTCTTGTACCATTGTAAGCGGTTTTAAGATTGAATGTACAACTGAATTCAATGACTCTTTGGATGTAACAATTTTCAGAACTC 1173 0.4126 LGDKIFTGTYGVNYGRIADNLPSPDSVVTLLKAAKIRNIRIYDADHKVLSAFKGSGIAIIIGLPNEFLKDVSVGEDRAMNWIKENVEPFLPGTRIRGIAVGNEILGGADMELWEVLLSAAKNVYTALDRLNLAHQIQVSSPHSEAVFANSFPPSACTFREDVLPFMKPLLQFFSQIGTPFYINAYPFLAYKNDPQHIDINYALFKKNPGIYDAKTKLHYDNMFLAQIDAAYAALDKLGFDKMEVIVSETGWASKGDDNEPGATLKNAKTYNKNLRKLLLKKKGTPYRPKMVVRAYIFALFNENLKPGPTSERNFGLFKPDGSISYDIGFTGLVSSSATSSFLSFKGIASFYLILVSTSCAAFLFLVPL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00507 368 Gene3D Glycosidases 9 334 - -
Pste6g00507 368 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 334 IPR044965 GO:0004553|GO:0005975
Pste6g00507 368 FunFam Glucan endo-1,3-beta-glucosidase 14 8 335 - -
Pste6g00507 368 Pfam Glycosyl hydrolases family 17 11 329 IPR000490 GO:0004553|GO:0005975
Pste6g00507 368 SUPERFAMILY (Trans)glycosidases 10 328 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00507 Pste-Chr6 1903515 1904761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00507 6 338 Glycoside Hydrolase AT3G15800 78.144 0.0 545
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00507 6 1903515 1904761 Pste6g00507 6 1903515 1904761 ECH
Pste3g03743 3 29604675 29606289 Pste6g00507 6 1903515 1904761 PCT