Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00475 CTTATTAGCAACAAGGAGAGGCCACAATTGCTCTCAAATCCTGAAAAGGTTAATACTCCCTCACCCTTATCCTATCTTCTTCAACACAATTTACAAATATATATATATATATATTTCTCTTTTCCTTCAATTTCCCCAACTAGCTCTCCAAAATGCCCCCTAGATCAGGAAAGGGGAAATCAAATAAACCAAAGGCTGAGAAGAAGAAAAAGGAAGACAACAAAGCAGCTGCGCCTTCTCTTCTCGACATCACTGTTCTAACTCCATATGACACACATATTGTTTTAAAGGGTATCTCTACTGACAAGATACTTGATGTAAGAAAACTATTGGCTGTCAATGTGGAGACATGCCATTTCACAAACTATTCTTTATCTCACGAGGTCAAAGGGCAGAGATTAAATGACCGACTGGAAGTTATTACCCTAAAGCCATGTCTTCTAAGAATGGTTGAAGAGGATTACAGAGATGAAGGGGAAGCAATCGCGCAGGTGCGAAGGGTATTGGACATTGTGGCCAGCACAACGAGGCCCAAACGGAGCATATCAAGCCCAGAGTGGAAGCCCAAGAAAAATGGTAAAGGGCAACATCAGAACAAGACGAGTTTGAGCCCACCGGGGACACCGCCGGCAGCGTCGCCGATATCGGAAAACGTGGGTATGAAGGCCATTCACCCGACGCCGAAGCTCTCAGATTTCTACGAGTTCTTCTCCTTCTCTCACCTCTCTCCTCCCATTTTACAATTGAAGAGATGTGAAGTCAAGGATGAAGAAGATAGGCGCAAAGGAGATTACTTTCAGCTTCAGGTTAAAATATGCAATGGGAAAGTAATAGAAGTGGTTGCTTCCGAGAATGGGTTTTACACAGTTGGCAAGCAGTCTCTGCGCAGCCACACCTTGGTTGATCTTCTTCAACAGCTCAGCCGAGCCTTTGCTAATGCATATGAATCGTTGATGAAAGCTTTTCTGGAACGTAATAAGTTTGGAAATCTTCCTTACGGATTCCGAGCAAATACGTGGCTTGTCCCTCCATCAGTTGTTGAGTCTCCTTCAAGCTTTCCTGCATTACCTGCTGAAGATGACAACTGGGGTGGTAATGGTGGTGGCCAAGGAAGAAATGGAGAATTCGATCTTAGACCATGGGCAACAGATTTTGCGATACTGGCTTCTCTTCCTTGCAAAACCGAGGAGGAGAGGGTGGTCAGAGATAGAAAAGCATTTCTGCTTCATAGTCAGTTTGTTGACACCTCAATATTTAAGGCTGTTGCGGCTATAAAGTATGTCATGGAATTCAACTCAAGCAATGAATTGAATTCTTCTCCAGGCTCTATTCTACATGAAGATCATGTGGGAGACTTATCCATTATAGTCAAACGCGACATCCAGGATGTAAATAGAAAGCATGGTTCTGTACCAAATGAATCCATCATGCATAAGGAGGATGCTAAGAAAAATTTAATCAAAGGGTTGACTGCAGATGAAAGTGTAATTGTTCATGATACTTCTTCCTTGACTGTCGTTGTTGTACACCACTGTGGATATACTGCAACAGTAAAGGTTGTGGGTAATGTGAACATGAGGAAGCCTAAAGTTCGAGATATTGAGATAGATGATCAGCCAGATGGAGGGGCAAATGCTCTCAACATCAACAGTTTGAGACTACTGCTTCACAAGTTGGGAGGTAAGTCATTGGAAGGGACTTTATCATCCATATCAGTATCAAATTCAGATGACTTGGATGCTTCTAAAAGGCTTGTTCGGAAGGTGGTTCTAGAATGCATGGAAAAGATAAGGGAGGAGCCAAGTCTTTCAGAAAGATCTATTCGATGGGAACTAGGTTCCTGTTGGATGCAGCATCTGCAAAAACAGGAAGCTTCAACAGATAACAGTTCCAAAAGCAAAGAAAATGGCAATGATGTTGAGCAAGCTGTTAAAGTTAAAGGTCTTGGAAAGCAATTTAAATTTCTGAAGAAGAGAGACAAGAAATCAAATAATCTAGAAAGTGCAGATTCTAGGGAGCAAAATTACTCTAGAACTGCAAACGGGAATGATGTTGCTGATAAAGTTGAGCCAAACAATGATGACTTAAGTAACTCTAATGAATTAGAGAAACTACTTTCTACAGAAGCATTTTTGCGTCTCAGAGAGTCTAGTACTGGTCTTCACATGAAGTCAGTGGATGAACTTATCAGCATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGCTATGGACTTTGGATCACTTGAACTTTCTCCAGTGGATGGTCGTACCTTGACTGACTTTATGCATTTAAGAGGATTACAGATGCGTTCTTTGGGTAAAGTGGTTAAACTAGCAGACAATCTTCCACACATACAATCCCTCTGTATTCATGAGATGATTACTCGAGCATTCAAGCATCAAGTTAAAGCTGTTATTGCGTCTGTTGACAATGCAGCAGATCTACCTGCAGCCATTGCATCAACACTGAATTTCTTACTTGGTGGGTATCGAACAGAAGATACCAACCAAAGTTTGAGTGATGATCATAATCTCAGAATTCAATGGTTACAAATATTTTTGTCCAAAAGATTTGGGTGGACACTGAATGATGAATTTCAACATTTGAGGAAGTTGTCGATTCTCAGAGGGCTCTGTCATAAGGTTGGATTGGAATTGTTCCCAAGAGATTATGACATGGAGTCCAGTAAACCCTTTGGGAAAAGTGACATTATCAGCCTGGTTCCCGTTTGCAAGCATGTAGGGTGCTCCTCAATAGATGGTCGCAATTTATTGGAGTCTTCCAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTAAATTATGGAACAAAGGCATTAGCTAAGATGATGGCTGTTTGTGGACTCTATCATCGAAATACTGCGAGTGCATATAGTCTTCTAGCTGTGGTTCTCTACCACACTGGAGATTTTAACCAGGCGACCATTTATCAGCAAAAGGCCTTGGATATAAATGAGAGGGAGCTTGGTCTTGACCACCCTGACACTATGAAAAGCTATGGAGATCTTTCTGTTTTTTATTATCGTTTGCAACACATCGAGTTGGCTCTAAAGTATGTTAATCGTGCTCTATTCCTTCTTCATTTTACTTGTGGGCTGTCTCATCCAAACACAGCTGCAACATATATAAATGTTGCTATGATGGAAGAGGGCATGGGAAATGTTCATGTAGCACTCAGATACTTACATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGCAGATCATATACAGACTGCCGCAAGCTATCATGCAATAGCTATAGCTCTTTCATTGATGGATGCATTTTCTCTGAGTGTGCAACATGAGCAAACAACATTAAAGATACTTCAAGCAAAGCTTGGATCAGAAGACCTTCGAACGCAGGATGCTGCCGCATGGCTAGAATATTTTGAATCAAAAGCCATAGAGCAGCAAGAAGCAGCTAAAAATGGAATTCCAAAGCCTGATGCATCCATTGCAAGTAAAGGTCATCTTAGCGTGTCAGATCTTCTGGATTTTATTAGTCCCGACCCAAAAGGAAACGATGCTCAAAGGAAACAAAGGCGTGCAAAGATACTCCCCACAAGTGATGACCACAGTCAAGAAGAGCATGACGATGCAATTGCTGATGAGAGCATTCTTTTTGATAACTCAAAAGATGCTTCCGGTTTGGTAGAAGGCAAAATAGAAGAAACAAATGGCACACTTCACTTTCAAGTACCTAAAGAAAATAGTGATGTCACTAGGTACAGGGCAGTGACAAGTGAACCTGTTTATGAGGCATCATCTGATGAAGGTTGGCAAGAGGCCAATTCAAAAGGACGATCAGGAAATGCTGCTAACCGCAAATTTGGACACAGAAAGCGACCTCATCTATCAAAGCTCAGCATTAATGGTTCTAATAATTACATACACAGGGAAGGGAGCTCTAGGAATGACATTACTTCATCACCACAAAGAGGAGTTCCAAAAGTCATGTCAGACTTGTCATCTCCATCTAGACGAACAAAAACTCGAAACTTAACTTTGAATGAGGATTCTGTTAACTATCCAACAAAAGCTTCTGTGTCCAAAATTTCATCTCCAGCATCTCTGAGTTCATTGGCTTCAAAGTCTATATCTTACAAACAAGTGGCTTTGGCACCACCAGGTACAGTTTTAAAGCCATTGTTGGAGAAGGCTGAGATGGACAAGGTTAATGCTGAAGATGAGATATGCAACAGACCAGCTGTGGCATCAATAAGTGAAGGTACCATAGTTAATACAGTTTCTCACCATGATGAAGCAGAGGAAACTCATGAAATTGAGCCAGAGCAAGAAAATTCTGCTTGGGAACATGAGAAGGTTTCCCTTGCTTCTGATCAGGTAAAACCTACAGAAACAAATGGCAGTAAGCTTTCAGCTGCAGCCAAACCTTTCAATCCAGGAATGTTGTCCATGTCTCACCATTTAAATTCAGTTTCCTTCACAACCATGTGTGATACAGATGTTAGTCAAGGCATGCACGTGGAGCCCATGCTTCCTCCTGCTGTTGCTAGAGTCCCTTGTGGGCCTAGATCACCTCTATATTATAGAACCAACTATACTTTTCGCATGAAACATGGTTTTTCTAAAAGCCAAACCCCTATCAGGGAAAGAAGTGGATTTGGGTCTCCAAGAATAATGAATCCACATGCGCCTGAGTTTGTTCCCAGAAGTGCTTCTCAAATAGAAGCCAATCATGTCAATTCAAAGGTTTCCAATGAGCATAATTCTCTGTCTGAGGTAGGCATTGCAGAACAAAATAAGCTAGATGAAAGTTTTGCTAAAATCAGGGAAAGTTCCACAAAAAATAGCATTTCTGAATCTGAGAAATCTGAGATAGCAAGGCAGATATTGCTCAGTTTTCTAGTGAAATCTGTCAAAGAAAATATTGATTCCGTGGATGAATCTAAGGATGGTGAAGGAAAAATTGAGAACTTGGTAAGTTGTTCTGATGAAATAGCCAAAGACAGTGCTGTCATAAACATTGTGTATGGAAATGAGGAAAAGAATAAAACAGTGCCTCATTCCAGTGATAGTGATGAGCAGGAGAAATTAGGTGTTAATGAAAAAAAGAATGGAGATGGTGAAGGATTTATAGTTGTCTCAAAGAGGAGGAAAAACAGGCAGAAAATCACAAATGGAGTCACAGAATTGTACAACCAACAGTCCATTTGTGCTTCAGTTCGTTGAATATAGAGTTATAAAATGAATAACCAATATTGCCTCTCCATCTGAGTGTTTGTCTGGCCAAAGCTCTGGACATCATATTGTTTATATTATCCTTCACGGCCTAGAATTTTGGTCATTCAATTCATTTTGTTTTTTGTCAATATAGTAAGTCTATTTGGAATTTGTTTATTCTCTATATAGTTAGTTTTGTTCTGATACTTGGAAATTTTACTTTATCAATAAAAAGCTTATTGGCAACTTTA 5476 0.4047 MPPRSGKGKSNKPKAEKKKKEDNKAAAPSLLDITVLTPYDTHIVLKGISTDKILDVRKLLAVNVETCHFTNYSLSHEVKGQRLNDRLEVITLKPCLLRMVEEDYRDEGEAIAQVRRVLDIVASTTRPKRSISSPEWKPKKNGKGQHQNKTSLSPPGTPPAASPISENVGMKAIHPTPKLSDFYEFFSFSHLSPPILQLKRCEVKDEEDRRKGDYFQLQVKICNGKVIEVVASENGFYTVGKQSLRSHTLVDLLQQLSRAFANAYESLMKAFLERNKFGNLPYGFRANTWLVPPSVVESPSSFPALPAEDDNWGGNGGGQGRNGEFDLRPWATDFAILASLPCKTEEERVVRDRKAFLLHSQFVDTSIFKAVAAIKYVMEFNSSNELNSSPGSILHEDHVGDLSIIVKRDIQDVNRKHGSVPNESIMHKEDAKKNLIKGLTADESVIVHDTSSLTVVVVHHCGYTATVKVVGNVNMRKPKVRDIEIDDQPDGGANALNINSLRLLLHKLGGKSLEGTLSSISVSNSDDLDASKRLVRKVVLECMEKIREEPSLSERSIRWELGSCWMQHLQKQEASTDNSSKSKENGNDVEQAVKVKGLGKQFKFLKKRDKKSNNLESADSREQNYSRTANGNDVADKVEPNNDDLSNSNELEKLLSTEAFLRLRESSTGLHMKSVDELISMAHKFYDEVALPKLAMDFGSLELSPVDGRTLTDFMHLRGLQMRSLGKVVKLADNLPHIQSLCIHEMITRAFKHQVKAVIASVDNAADLPAAIASTLNFLLGGYRTEDTNQSLSDDHNLRIQWLQIFLSKRFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMESSKPFGKSDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVNYGTKALAKMMAVCGLYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMDAFSLSVQHEQTTLKILQAKLGSEDLRTQDAAAWLEYFESKAIEQQEAAKNGIPKPDASIASKGHLSVSDLLDFISPDPKGNDAQRKQRRAKILPTSDDHSQEEHDDAIADESILFDNSKDASGLVEGKIEETNGTLHFQVPKENSDVTRYRAVTSEPVYEASSDEGWQEANSKGRSGNAANRKFGHRKRPHLSKLSINGSNNYIHREGSSRNDITSSPQRGVPKVMSDLSSPSRRTKTRNLTLNEDSVNYPTKASVSKISSPASLSSLASKSISYKQVALAPPGTVLKPLLEKAEMDKVNAEDEICNRPAVASISEGTIVNTVSHHDEAEETHEIEPEQENSAWEHEKVSLASDQVKPTETNGSKLSAAAKPFNPGMLSMSHHLNSVSFTTMCDTDVSQGMHVEPMLPPAVARVPCGPRSPLYYRTNYTFRMKHGFSKSQTPIRERSGFGSPRIMNPHAPEFVPRSASQIEANHVNSKVSNEHNSLSEVGIAEQNKLDESFAKIRESSTKNSISESEKSEIARQILLSFLVKSVKENIDSVDESKDGEGKIENLVSCSDEIAKDSAVINIVYGNEEKNKTVPHSSDSDEQEKLGVNEKKNGDGEGFIVVSKRRKNRQKITNGVTELYNQQSICASVR 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00475 1693 MobiDBLite consensus disorder prediction 606 648 - -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1633 1661 - -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1135 1161 - -
Pste6g00475 1693 ProSiteProfiles Clueless (Clu) domain profile. 308 580 IPR025697 -
Pste6g00475 1693 SUPERFAMILY TPR-like 882 985 IPR011990 GO:0005515
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1218 1297 - -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1250 1297 - -
Pste6g00475 1693 ProSiteProfiles TPR repeat profile. 916 949 IPR019734 GO:0005515
Pste6g00475 1693 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 8 1525 IPR027523 GO:0006996
Pste6g00475 1693 CDD CLU-central 705 846 IPR033646 -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 126 165 - -
Pste6g00475 1693 Pfam Mitochondrial function, CLU-N-term 50 121 IPR028275 -
Pste6g00475 1693 SUPERFAMILY TPR-like 953 1077 IPR011990 GO:0005515
Pste6g00475 1693 Gene3D Tetratricopeptide repeat domain 875 1109 IPR011990 GO:0005515
Pste6g00475 1693 Pfam Tetratricopeptide repeat 999 1073 - -
Pste6g00475 1693 Pfam Tetratricopeptide repeat 915 985 - -
Pste6g00475 1693 SMART tpr_5 1000 1033 IPR019734 GO:0005515
Pste6g00475 1693 SMART tpr_5 958 991 IPR019734 GO:0005515
Pste6g00475 1693 SMART tpr_5 916 949 IPR019734 GO:0005515
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1127 1161 - -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1 23 - -
Pste6g00475 1693 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 871 1121 - -
Pste6g00475 1693 Pfam Translation initiation factor eIF3 subunit 135 703 845 IPR033646 -
Pste6g00475 1693 MobiDBLite consensus disorder prediction 1635 1661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00475 Pste-Chr6 1776260 1788464 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00475 6 1776260 1788464 Pste6g00475 6 1776260 1788464 ECH