Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00109 AGGCATCCATCCTTATGAAGTTGAAGTGAAGCAGAGAGAAAAAGTAAAGGAAGTTTTGCTAGTCAGTCTATATATAAGTTGAAGGAGGTTGAAAAGAAGGCAATTACTGAACCCTAAGTGAAAAACAGTTAGACAGAATCAACCCCAATTAAAAAGACAAAAATGTGGTCTTCCAACTCCAACTCCAACACTAAAACCCAAACCCAAACCCCTTCTTCGCTCTCACTCTGCAATTCGCAGCCGCAACCTCAGGGAGGTAAGATTAACATGGGATTGGAATCCCAATCGCAGAAGAACAAGTATGCCCACGGGGTATTTGGAGACGTCTACAGCATCGTCAAAGACATCGACATTGATCATCATACCGCTACCTTTAATTTTCAATTTCACCTTCCCCCGCTTCCAGTTCCAAATTTTCTGGGCTCGGGCTCTAGAGAGGTTCGCGAGTTCATCAGCGGGGCCCTTGCAGGGGCTATGACAAAGGCTATACTTGCCCCTCTTGAGACAATCAGGACTAGAATGGTAGTTGGCGTTGGGTCAAAACATATTGCCGGTAGTTTCATACAGGTTATAGAGCAGCAGGGATGGCAGGGATTGTGGGCTGGCAACATGATCAATATGCTTCGTATAGTTCCTACACAGGCCATCGAGATGGGCACATTCGAGTTTGTCAAACGAGCAATGACTTCCGTTCAAGACAAATGGGAACACAATCCACACCCCAACTTTCACATAGGTTCCATCAATTTCAACTTGCCTTTATCTTGGATTTCACCTGTTGCCCTCGCTGGTGCAGCTGCAGGAATTGCTAGCACACTTGTATGCCATCCCCTCGAAGTTTTGAAGGACAGGTTAACTGTAAGTCCTGAAGCCTACCCTAATTTAGGTATTGCAATTAGAAATATTTATAAAGATGGTGGTGTTGGCGCTTTTTATGCTGGTATCTCACCAACTCTAGTTGGCATGCTTCCATACAGTACATGTTATTATTTCATGTATGATACAATGAAGGATTCTTACTGCAAGACCCGAAATAAGAAATCTCTAACTCGTCCAGAGATGGTTTTAATTGGAGCTATAGCAGGTTTCACTGCCAGTACAATTAGCTTCCCGTTGGAGGTGGCTAGGAAGCGCCTGATGGTGGGTGCTTTGCAAGGTAAGTGCCCCCCAAACATGGCAGCTGCTCTTTCAGAAGTTATTAGAGAAGAAGGTCTGGGAGGTCTTTACAGAGGATGGGGTGCTAGCTGTTTAAAGGTCATGCCATCGTCTGGTATCACGTGGATGTTTTATGAAGCATGGAAAGACATATTGCTTGTCCAGAATAATAATCCCCTTTAGTGCTAATAAGGTTGTGAATTTGTAGCTCTGCAAGTAAACGCCATAGGAATGGTATAAACAAATGCCGGGTAAGGGAAGATCGGAAAGTTGTTTTGCCTGGCAGCTAAGCTGGCAATGGTCACATCACATCTACTAATGAGTTAGTTACCTGGCTTGTAAGTTTCCAGATTTTGATATTGATTTGGGAAGATTCTCATTCAAGAAAAAGGTCCAACATTGAGCTTGGGAGAAGTTTCCTATGTTTATTATTACCTTCATTCCATT 1602 0.4351 MWSSNSNSNTKTQTQTPSSLSLCNSQPQPQGGKINMGLESQSQKNKYAHGVFGDVYSIVKDIDIDHHTATFNFQFHLPPLPVPNFLGSGSREVREFISGALAGAMTKAILAPLETIRTRMVVGVGSKHIAGSFIQVIEQQGWQGLWAGNMINMLRIVPTQAIEMGTFEFVKRAMTSVQDKWEHNPHPNFHIGSINFNLPLSWISPVALAGAAAGIASTLVCHPLEVLKDRLTVSPEAYPNLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCYYFMYDTMKDSYCKTRNKKSLTRPEMVLIGAIAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLGGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQNNNPL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00109 391 MobiDBLite consensus disorder prediction 1 37 - -
Pste6g00109 391 Pfam Mitochondrial carrier protein 299 384 IPR018108 -
Pste6g00109 391 Pfam Mitochondrial carrier protein 93 175 IPR018108 -
Pste6g00109 391 Pfam Mitochondrial carrier protein 207 288 IPR018108 -
Pste6g00109 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 295 382 IPR018108 -
Pste6g00109 391 SUPERFAMILY Mitochondrial carrier 93 377 IPR023395 -
Pste6g00109 391 PANTHER SOLUTE CARRIER FAMILY 25 87 383 - -
Pste6g00109 391 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Pste6g00109 391 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Pste6g00109 391 PRINTS Mitochondrial carrier protein signature 304 326 IPR002067 GO:0055085
Pste6g00109 391 PRINTS Mitochondrial carrier protein signature 148 168 IPR002067 GO:0055085
Pste6g00109 391 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Pste6g00109 391 Gene3D Mitochondrial carrier domain 89 387 IPR023395 -
Pste6g00109 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 173 IPR018108 -
Pste6g00109 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 201 285 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00109 Pste-Chr6 338904 341221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00109 71 391 Organic Solute Cotransporters AT3G20240 71.207 7.29e-175 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00109 6 338904 341221 Pste6g00109 6 338904 341221 ECH