Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00078 GAGTGAGGGCGAATGGAAGGGGAACAGAGTTGGTGTGAGGGTGAGGCGTGAAGAGGAAAGGATGTGGCGTCTGAAGATAGCAGAAGGTGGAAATGACCCATACATATTCAGCACAAACAATTTTGTAGGGAGGCAGATATGGGAGTATGATCCTGATGGTGGGACTCCCGAGGAACGAGCTGAGGTTGAAGCTGCTCGTCATCATTTCTACCAAAACCGCTTCAAGGTCAAGCCCTGTGGTGACCTCCTTTGGCGCTTTCAGATTCTGCGACAAAATAACTTCAAACAAACAATACCTAGTGTCAACATCCAAGATGGAGAAGAAATTACCTACCAAAAAGTCACAACCGCCATGAGAAGGGGTGCACATCACCTCGCCGCCTTGCAGACCACTGATGGCCATTGGCCTGCACAAATTGCAGGTCCTCTTTTTTTTCTTCCTCCTTTGAATGAAGATGGAGGGTGGGGACTACATATAGAGGGTCATAGCACCATGTTTTGTACTGCACTTAACTATATATGTATGCGGATTCTTGGAGAAGGACCTAATGGAGGTCATGACAATGCTTGTGCTAAAGCAAGAAAGTGGATTCAAGATCATGGTGGTGTAACACATATACCTTCATGGGGGAAAACTTGGCTTTCGATACTTGGTGTATTTGATTGGTGTGGAAGCAACCCAATGCCCCCCGAATTTTGGATCCTTCCTTCCTTTCTTCCTATGCATCCAGCTAAGATGTGGTGTTACTGTCGATTGGTATACATGCCTATGTCTTACTTATATGGAAAAAGTTTATACATATTCACCGAACCACTACTAACTCGTTGGCCTTTCAACAAGTTAATTAGAGAAAAAGCCCTTCAAGTAACAATGAAACATATTCATTATGAAGATGAGACTAGTCGATACATAACCATTGGTTGTGTGGAAAAGGTTTTATGCATGCTTGCTTGTTGGGTGGAAGATCCCAATGGAGATGCTTTTAAGAAACATCTTGCAAGGGTTCCAGATTACTTATGGATTTCTGAAGATGGAATGACCATGCAGAGTTTTGGTAGCCAAGAATGGGATGCTGGCTTTGCTGTTCAAGCTTTGCTTACCGCTAACCTAATTGAAGAAATTGGTCCCACACTTGCAAAAGGGCATGATTTCATAAAAAAGTCTCAGGTGAAGGATAACCCTTTTGGAGATTTTAAGGGTATGTATCGTCATATTTCTAAAGGATCTTGGACATTCTCTGATCAAGATCATGGATGGCAAGTTTCTGATTGCACTGCAGAAGGTTTGAAGTGTTGCCTGCTTCTATCAATGTTGCCACCAGAAATTGTGGGAGAAAAGATGGAACCTGAAAGATTATATGATTCAGTTAATAGTAAAAAAGGTGGCTTAGCAGCATGGGAGCCTGCAGGAGCTCAAGAGTGGTTAGAATTACTCAATCCCACAGAATTTTTTGCGGACATTGTAGTCGAACATGAATACGTTGAGTGTACCGGATCTGCAATTCAAGCTTTAGTTTTGTTCAAGAAGCTATATCCATGGCATAGGAAGAAAGAGATAGAGAATTTCATTACCAACGCAGTTCGATTCCTCGAAGATACACAAACAGCTGATGGTTCATGGTATGGAAATTGGGGTGTTTGCTTCACATATGGCTCTTGGTTTGCACTCGGTGGTCTAGCAGCTGCCGGAAAAACATACACCAATTGTGTTGCCATTCGTAAAGCTGTTCAATTTCTACTTACAACACAGAGAGAAGACGGTGGATGGGGGGAGAGCTATCTTTCAAGCCCAAAAAAGATATATGTACCTTTAGAAGGAAATCGATCAAATGTTGTACATACAGCATGGGCTCTTATGGGACTAATTCATGCTGGACAGGCAGATAGAGACACCACTCCTCTTCATCGTGCTGCAAAGTTGCTCATTAATTCTCAATTGGAAGAGGGCGATTGGCCCCAACAGGAAATCACTGGAGTATTCATGAAAAATTGCATGTTGCATTATCCCATGTATAGAGATATTTATCCAATGTGGGCTCTAGCTGAATATCGTAGACGAGTTCCATTGCCTTCCACTGAAGTTTAATTAATTTAGATAAGTGTGAGCATAAAATGGCAAAGTCATATCAATGAAGGTCGACGCAATTTTTTTTTTTTAAAAAAAAAAAAAAACTGTGCTATCAAGCTTTATCAATTTTCTCCAATTCCCATG 2212 0.4177 MWRLKIAEGGNDPYIFSTNNFVGRQIWEYDPDGGTPEERAEVEAARHHFYQNRFKVKPCGDLLWRFQILRQNNFKQTIPSVNIQDGEEITYQKVTTAMRRGAHHLAALQTTDGHWPAQIAGPLFFLPPLNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPNGGHDNACAKARKWIQDHGGVTHIPSWGKTWLSILGVFDWCGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKSLYIFTEPLLTRWPFNKLIREKALQVTMKHIHYEDETSRYITIGCVEKVLCMLACWVEDPNGDAFKKHLARVPDYLWISEDGMTMQSFGSQEWDAGFAVQALLTANLIEEIGPTLAKGHDFIKKSQVKDNPFGDFKGMYRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPWHRKKEIENFITNAVRFLEDTQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCVAIRKAVQFLLTTQREDGGWGESYLSSPKKIYVPLEGNRSNVVHTAWALMGLIHAGQADRDTTPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPMWALAEYRRRVPLPSTEV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00078 674 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 130 328 IPR008930 -
Pste6g00078 674 FunFam Terpene cyclase/mutase family member 307 670 - -
Pste6g00078 674 SFLD Prenyltransferase Like 2 255 666 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pste6g00078 674 Gene3D - 129 253 - -
Pste6g00078 674 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 269 668 IPR008930 -
Pste6g00078 674 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 244 668 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pste6g00078 674 ProSitePatterns Terpene synthases signature. 517 531 IPR002365 GO:0016866
Pste6g00078 674 CDD SQCY_1 98 663 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pste6g00078 674 Pfam Squalene-hopene cyclase C-terminal domain 336 665 IPR032696 -
Pste6g00078 674 Pfam Squalene-hopene cyclase N-terminal domain 130 243 IPR032697 -
Pste6g00078 674 NCBIfam squalene/oxidosqualene cyclases 252 665 IPR018333 GO:0005811|GO:0016104|GO:0016866
Pste6g00078 674 Gene3D - 307 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00078 Pste-Chr6 232718 245222 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00078 6 232718 245222 Pste6g00078 6 232718 245222 ECH