Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00038 TAAAGATGAGCACGGCCATTGTCATCCCAATTTTTATTCCACCCATTAAGCAGAAATTTGTAGGTGTGGATTTTTTGTGCTAATTGATTTTTTTTTTTTTTTGAAATGGAATCCCTAGTTTGAAACTTGAAAAGGATGGAAGACGGAAAGTTAGGTGTGGAAGAAGAAGGTACGGGTAAATTAGTAAGTTGATAATAGATAAAGTAGGGGTGTTAAGAGAAAAAAGGATGCGCATGACCGGGTCGTTCCTACAAGGAAGTATTTTCTCGTTGTGACTTGTCAACCATGTGACCTGTTGTTCATTTTTACATAAAACAATCAAAATTGAACTTCAACTCTTTCTTCTTCAAATCCCTGCAACTGCAAGTAGGCGACAATCGTCTGAATTTTGACTACGCTGAGAAGATCGGGTAGAAAAGAGGCAAGATCCAACGTCTCTAATACACCTTTCTTTCAGAAACAAAATGAAGCAATGGAAATGATGATACTCTCTTTTGTTGGCCCTGCAGTTCAAACTGCATGGAGTCTTTCCCCTCATGAAGAGAGTTTGATAACTAGTGTGGTTTTTGCTGGCATGCTAATTGGGGCATATTCATGGGGCATTGTTTCAGATAAACATGGAAGGAGAAAAGGATTCCTTATCACAGCGACAGTTACTGCTTTGGCTGGTTTTCTTAGTGCATTTGCTCCTAACTACTTACTATTAATCGCCCTCCGTTCTCTGGTTGGCATTGGTTTGGGAGGTGGCCCTGTATTATCGTCTTGGTTTCTAGAATTTGTTCCTGCTCCTAATAGGGGTACCTGGATGGTTGTCTTTTCAGCATTTTGGACTCTTGGTACAATTTTTGAAGCCTCACTTGCTTGGATTGTGATGCCAAAACTGGGTTGGAGATGGCTTCTTGCACTGTCTTCCCTTCCCACATCTTTCCTTCTTCTGTTCTACAAAGTGACTCCTGAGTCACCAAGATACCTATGCATGAAAGGTAGAACAGCTGATGCAATTAAAGTTTTGGAGAAAATAGCAAGAGTAAATGGAAGAGAACTTCCTTCTGGTATCCTTGTTTCTGACCATGAAATTGAGCTACACAAAATTGATAACCCTTCAGAGGACGCACACTTGCTCTCACCAAGAACAAATGATGTTGAACATCCTAAAGGAATAGTTTCCAATTTAGGAGGTATCTCATCGTTGTTGATGCTTCTCTCACCAAAATTGGCAAGGTCAACCCTTCTATTATGGGCTGTGTTCTTTGGTAATGCTTTTTCATATTATGGCCTTGTTTTGTTGACCACTGAGTTGAACGGACATAGTAAATGCATGTCACATAAATTGCAGACAGAGAAGTCCCAGGATGTTAGATACAAGAATGTTTTTATTGCTAGTTTTGCAGAGCTACCTGGGCTCCTCTTGTCAGCTGCAGCAGTAGATAAACTCGGTCGTAAACTCTCAATGTCAACCATGTTCTTCATGTGCTGTATTTTCCTTCTGCCATTAATATTCTATCTGCCTGAAGGCCTAACAACGAGCCTTTTGTTTCTAGCTCGCATATGCATCACGGCAACTTTCACAATTGTGTATATATATGCACCAGAGATGTACCCAACATCAGTCAGAACGACGGGTGTGGGAATTGCTAGTTCGGTTGGCAGGATTGGTGGAATGATATGTCCTCTGGTAGCCGTGGGTTTAGTACATGGATGCCATCAAACTGCAGCAGTCCTTCTGTTTGAAATCGTAGCTCTTCTTTCAGGAATATGTGTCATGTTCTTTCCGGTTGAGACCATGGGCCAAGAACTGCGAGATACTGTGCAAGTCTAAAAAAGACCAAACGACACGTAAACATAATGAGGTGTATCTCCCAAACTTTTAAATCATGAAAACATACTGACAAATTGATGCTCTGTCCTTGGAAATGAGCAGAACAGCAGAATTGAGTTGGTGAAGAAGTAATATAGGGAAAAGTTTCTGCCTACAAAAATATCCCGGTCATTATACGTATCCTTATTTCATTATATTTGAACTATTTTATTTATTCGCTCCCACAAATTTTTATCTTCTTTCAGTATCAGGATGCTTTTTTTTTAAGACTATGCATATTGCTTTGTAAATTAGAAAGTGGATGATCTTTATAAAGAGAACAATCCAGGTGAGAAG 2155 0.3981 MEMMILSFVGPAVQTAWSLSPHEESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFLITATVTALAGFLSAFAPNYLLLIALRSLVGIGLGGGPVLSSWFLEFVPAPNRGTWMVVFSAFWTLGTIFEASLAWIVMPKLGWRWLLALSSLPTSFLLLFYKVTPESPRYLCMKGRTADAIKVLEKIARVNGRELPSGILVSDHEIELHKIDNPSEDAHLLSPRTNDVEHPKGIVSNLGGISSLLMLLSPKLARSTLLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVRYKNVFIASFAELPGLLLSAAAVDKLGRKLSMSTMFFMCCIFLLPLIFYLPEGLTTSLLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASSVGRIGGMICPLVAVGLVHGCHQTAAVLLFEIVALLSGICVMFFPVETMGQELRDTVQV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00038 448 Pfam Sugar (and other) transporter 312 443 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste6g00038 448 Pfam Sugar (and other) transporter 25 186 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste6g00038 448 ProSitePatterns Sugar transport proteins signature 1. 314 329 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste6g00038 448 FunFam Organic cation/carnitine transporter 7 1 439 - -
Pste6g00038 448 SUPERFAMILY MFS general substrate transporter 3 443 IPR036259 -
Pste6g00038 448 Gene3D MFS general substrate transporter like domains 1 448 IPR036259 -
Pste6g00038 448 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 438 IPR020846 GO:0022857
Pste6g00038 448 PANTHER SYNAPTIC VESICLE GLYCOPROTEIN 2 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00038 Pste-Chr6 117222 130830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00038 10 446 Organic Solute Cotransporters AT3G20660 26.667 1.67e-32 127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00038 6 117222 130830 Pste6g00038 6 117222 130830 ECH