Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03459 TGAAAATGTCATCCGCCGGTGTCTCTACTCTTCGTGTGGTTCCCACTGAGCCATTGTTGTCACCAAAGGCCTTCCCTTCCCCGTCACACTTGTTTTTGGAAGACAAGTCCATTTTCATATATCTTTCCTTTTCGGGTTCATTGACTCCTATCCGTGTTATGGAATGGGATACCATTGAGTCTGTTAAATTCAAAATCCAAAGGTGTGAAAGCCTTCCATTTTTAACAACCAAGCAGAAGTTGGTTTATGCTGGCCGAGAACTTGCCCGTAGCGATTCTCTGCTCAAGGACTATGGAGTGACCCATGGAAATGTTTTGCATTTGATAATCAAACTGTCAGATCTTCAGGTCATCAATGTGAAAACCTCTAGCGGGAAGGAGTTCACTTTTCAGGTCGAACGAGGCAGGGATGTTGGCTACGTAAAGCAGCGAATTGCCAAAAGGGAGAAACAGTTTGATGATCCTGAGGAGCAGGAGCTTGTATGCAATGGAGAAAGACTTGAGGACCAGAGGCTTATTGATGATATCTGCTGCAAACATAATGATGCAGTGGTACATCTGTTTGTGAGAAAAAAACATGTTAAAGTTCAGAGGAGACCCCTTGAGTTGTCCATTGTAGCCACAGATTTGATTGACAAGGAAAAAAATTATGTCAATGGAAGAACTTATAGGAGAAATTATGATGTTGGTAAAGAAGATGCTATTAGGAAGTCTGATGTCATTCAAAGAGCTGTGCCAAGAAAGCCTCCTGATAGAGATTTTATTTTAGAGCCAGTTCTTATCAACCCTAAAATTGAATTAGCTCCAGCTATTTGGAATATGATCAACTCTACATATGATGGGCTTGACAGTGGAACATATCCAATCAGATCTGCAGAAGGTACAGGAGGAGCTTACTTTATGCTTGACTCAGCGGGGCAAAAATATTTGTCTGTTTTCAAGCCAATTGATGAAGAGCCAATGGCTGTGAATAACCCTCGAGGTCTTCCTTTGTCATTAGATGGTGAAGGCTTGAAAAAGGGTACACGAGTTGGTCAAGGAGCATTCAGGGAAATTGCAACCTATGTTCTAGATCATCCATTGAGTGGGCGCCGCTCATTATTTGGTGATGAGAAAGGCTTTGCTGGCGTTCCCCCAACATTGATGGTTAAGTGCTTGCATAAAGCATTTAACCATTCTAGAGAATTGACTCCTAAGATTGGCTCCCTTCAGATGTTCACAGAAAATAGTGGAAGTTGTGAAGATGTGGGCCCTGGGGCATTCCCAGTAAAGGAAGTACATAAAATTACTGTTTTGGACATAAGACTGGCAAATGCAGATAGGCATGCTGGAAATATTTTGATCAGCAAAGAGGGGGACAACAACCAGTCTGTGCTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAGTGGCTTTACTGGCCCCAAGCTCGCCAGCCATACTCCCCAGAAACTATTGACTACATTAAGTTACTGGATGCTGAAGAAGATATTGCCCTTTTAAAGTTTCATGGATGGGATCTACCAGTGGAATGTGCCCGTACTTTGAGGATCTCAACCATGCTTTTGAAGAAAGGGGTAGATAGAGGATTGACCCCCTTTGCCATTGGAAGCCTCATGTGCAGGGAATCCTTGAACAAGGAATCTGTGATTGAAGAAATAGTACAAGCTGCACTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTGCTGGATGCTGTTTCGCAGATCATGGATCTGCACCTCGATGAGATTGTAGATACTTGCCAGTGTGTACATATGTTCACGTACATATGTATAGCTCGAATAATTGGATTTTTAGTTCTTGACAAACGAAGTCTATTTTCTTTGGTTGGAATGTCAAACCATTCT 1898 0.4236 MSSAGVSTLRVVPTEPLLSPKAFPSPSHLFLEDKSIFIYLSFSGSLTPIRVMEWDTIESVKFKIQRCESLPFLTTKQKLVYAGRELARSDSLLKDYGVTHGNVLHLIIKLSDLQVINVKTSSGKEFTFQVERGRDVGYVKQRIAKREKQFDDPEEQELVCNGERLEDQRLIDDICCKHNDAVVHLFVRKKHVKVQRRPLELSIVATDLIDKEKNYVNGRTYRRNYDVGKEDAIRKSDVIQRAVPRKPPDRDFILEPVLINPKIELAPAIWNMINSTYDGLDSGTYPIRSAEGTGGAYFMLDSAGQKYLSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREIATYVLDHPLSGRRSLFGDEKGFAGVPPTLMVKCLHKAFNHSRELTPKIGSLQMFTENSGSCEDVGPGAFPVKEVHKITVLDIRLANADRHAGNILISKEGDNNQSVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPETIDYIKLLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGVDRGLTPFAIGSLMCRESLNKESVIEEIVQAALDSVLPGTSEATLLDAVSQIMDLHLDEIVDTCQCVHMFTYICIARIIGFLVLDKRSLFSLVGMSNHS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03459 631 SMART ubq_7 36 109 IPR000626 GO:0005515
Pste5g03459 631 SMART ubq_7 114 188 IPR000626 GO:0005515
Pste5g03459 631 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Pste5g03459 631 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Pste5g03459 631 Pfam Phosphatidylinositol 3- and 4-kinase 292 541 IPR000403 -
Pste5g03459 631 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 46 566 IPR044571 -
Pste5g03459 631 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 283 576 IPR000403 -
Pste5g03459 631 Gene3D - 112 196 - -
Pste5g03459 631 SUPERFAMILY Protein kinase-like (PK-like) 431 592 IPR011009 -
Pste5g03459 631 CDD Ubl_ubiquitin_like 116 186 - -
Pste5g03459 631 Gene3D - 35 109 - -
Pste5g03459 631 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Pste5g03459 631 SUPERFAMILY Ubiquitin-like 110 189 IPR029071 -
Pste5g03459 631 ProSiteProfiles Ubiquitin domain profile. 116 173 IPR000626 GO:0005515
Pste5g03459 631 SUPERFAMILY Ubiquitin-like 41 111 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03459 Pste-Chr5 28014313 28016386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03459 30 591 Acyl Lipid Metabolism Gene Families AT5G24240 54.657 0.0 624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03459 5 28014313 28016386 Pste6g01773 6 8062901 8066231 PCT