Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03386 CACACGAACACCATCATGTTCTTATCTCATATTATGCTATGTCGCCTCTTCTTTCTAATCGTATTTGTTTTGGTTGTACTTGTACCTGCACTTGGCCTCGTATAGGCCGCAAGTATCAGGATACTTTTGAAGGTGAGATATTAAATGTATGAATGGCAACGTGGGGTGCACACTCACACTCACACTCAATGTTGTTATCCCATGGGAAAGGCGCAGGCCTTACTGTTAGAGGTGATTTAAGGTTTCACAGAACAAGAGGGTTTAAATATGCTTCTCATATGGTAGTGCTCAAAGTGTTTTCCTCCGCCACAAGGCCAAAGCTAACACGTTTGAACTCGTTACGACCTTGTTGCAGTTTCGAGTTGCAACGCAACCTAGGGAAAGGATATCCCACTACTACACAAATACCACGGCAACGGATATTCAAATTCGCGGCAGATCCCATGCTTGTTGTTCTAAAAAATTGGAGTAATTTACGCATTATGGCAGTAGCTGGCATATTGGTTTCCATTTTAATGATTATTCCATCAGCTGATGCTGTTGATGCACTCAAAACTTGTGCTTGCTTGTTGAAAGATTGCAGGATAGAACTGGCTAAGTGTCTTTCAAATCCATCTTGTGCTGCCAATATTGCTTGTCTCCAAACTTGCAACAATCGACCTGATGAGACCGAATGCCAGATTAAATGCGGGGACCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAATGTGCAGTCTCAAGGAAGAAATGTGTACCTAAGAAATCTGATGTGGGAGAATTTCCTGCTCCAAATCCTGATGTTCTTGTTAATAGCTTTAATATTGCTGATTTTAGTGGCAAGTGGTTCATCACTAGTGGCTTAAATCCGACATTTGATACTTTTGACTGCCAATTACATGAATTTCACACAGAATCCAACAAACTTGTGGGTAATTTGTCGTGGAGAGTACGGACTCCAGATGCTGGATTTCTTACTAGGTCCGCTGTGCAGACATTTGTGCAAGATCCTTCCTATCCTGGGATCCTCTACAATCATGACAATGAGTACCTTCACTATCAAGATGACTGGTACATTTTGTCATCCAAGATTGAGAATAAACCAGAAGACTACGTGTTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTATACACAAGAAGTGCAGTTTTGCCCGAATCTATAGTTCCTGAACTTGAAAGAGCAGCTAAGAGGGTGGGAAGAGACTTTAGCAAGTTCATCCAGACAGATAATACATGTGGGCCAGAGCCTTCCCTGGTTGAGAGGCTAGAGAAAAAGGTAGAGGAAGGAGAGGAGACCATTGTAAGGGAAGTTGAACAGTTGGAAGAAGAGGTAGAAAAGGTGGGGAAAACGGAGGTCACCTTGTTTCAGAGGTTGGTGGAAGGGTTCAAACTATTTCAAGAAGATGAGGAAAATTTCTTAAGAGGGCTATCAAAAGAAGAAATGGAGATACTCAACGGGCTCAAAATGGAAGCCGGTGAAGTAGAAAAGCTATTTGGACGTGCCTTGCCCATAAGGAAACTAAGATAAGTCTGCAAACCATGTCCAAGATAACTTGGAATCATAATTTTTTTTGTCTTTTTAAATTTCTCTTTGCTTTTATTCATTGACTACATTGCATGGATTTTAGATATCTTTCCTCCTCAATCATTGCTTTTATGCTGACATACTAATAGTTTTTCAAATATTCGTAACCGCGTTTACTATCATTTTGTTGTATATATTCAGAGTTATGAAACATATTTGACGTTAAAAATCACGTCCATTTAGAAGTCAATGGTTGTAGCTTGAATCTTTTATGTATTTAACGGGATTGCTTGCC 1866 0.4041 MATWGAHSHSHSMLLSHGKGAGLTVRGDLRFHRTRGFKYASHMVVLKVFSSATRPKLTRLNSLRPCCSFELQRNLGKGYPTTTQIPRQRIFKFAADPMLVVLKNWSNLRIMAVAGILVSILMIIPSADAVDALKTCACLLKDCRIELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPDVLVNSFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRVRTPDAGFLTRSAVQTFVQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPEDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKRVGRDFSKFIQTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVEKVGKTEVTLFQRLVEGFKLFQEDEENFLRGLSKEEMEILNGLKMEAGEVEKLFGRALPIRKLR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03386 473 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 90 462 IPR044682 GO:0010028|GO:0046422
Pste5g03386 473 ProSitePatterns Lipocalin signature. 224 235 IPR022272 -
Pste5g03386 473 SUPERFAMILY Lipocalins 212 381 IPR012674 -
Pste5g03386 473 Gene3D - 206 387 IPR012674 -
Pste5g03386 473 Coils Coil 384 415 - -
Pste5g03386 473 CDD lipocalin_VDE 207 381 - -
Pste5g03386 473 Pfam VDE lipocalin domain 135 375 IPR010788 GO:0046422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03386 5 27258576 27262059 Pste5g03386 5 27258576 27262059 ECH