Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02988 GGAGGTTCTTGGACGAATGTAGCTGAGGCAGAGCAGAGTGTAAAAAGGAGGGAAGAAGAGCTCTTTAAGAAACGAAGAGAAATTCATACTGCACATTCCCGCGACAAGGTGTTGGAAGTTGTTCCTGCCATGGTGGAGCGCCTATGTTCTGAGTTCCCTGAAGCACTACGGGAGGCAAAAATTCAGACCAAAAATCTCTTCCAACTTTGTGAACTCTGCCCTCCCATGCATCCCTGCGTGGAGGATATTGTTGTCCCTCGATCTCTCGAGTACTTGTCAAGGGACGATGCACCTGAATTGCAGTTAGGATCTCTATTGGTTCTAACCAGCCTTTCTTCCGGAACACACGACCACAGAAGAATCCTCCTTCAACAGGGTGCTCTTCCCTTATTACTCAAACTTCTCACATCTGATACTCGAGATGATATCATGCAAGAGACATTATGCGTTCTAGGGAACATGGCTGATTCACCTTACTATAGGCTTCGTCTTCTTGACCTTGGTGCTCTCATGCCCATATTAAATCTCTTGAAATCACCACATTCAAGATTCTCACTCTTCAAGATTGCTACCTTCTGTTTGTCTAACTTGGTCCGTGGAAAGCCTCGGGTAAAACCTGCCTTGCCTGTCCTTCAACAACTCCTCCATTCCACCAACGAAGAAGTTGTAATAGATGCATGCTGGGCTCTCTCTTACCTTTTGGATGGCCAAATTGACATTGCTGAAGATCTTACTGAAGAAGGAGTTTGCCCAAAGCTTATGGAGCTTCTCAACCGTCCATCAGAGACAGTTATTTTACCAGCGCTTGTGGCACTCGGAAATATTGCTGCTGGTTTTATTGCCCAGACACAGCTTGTACTTGATAGCCAATTTCTCCCGCGTGTTTACCATCTTCTTACGAATGAATACAATAAAGATATCCATAGAGAAGCTTGTTGGGCAATCTCAAATATCACAGCTGGGAATAGAGATGAAATACAGGCTGTCATTGAGGCCAACATTATTCAGATTCTTGTTCACGCTTTGCATCATGATGATTTTGACGTCCAGAAGGCGGCTACAAGGGCGATCTTCAATTTCACCTGCAGAGGATCCACTTTTCATATCAGGTACCTAGCCGCTCAAGGTTGTATTAGGCCACTATGTAAATTGTTGACCTGTTCAGACCCAGTGCTTCTGTCAAATTGTCTCCAGGTGCTGGATAGCTTCATGAGCGTGGGAGAAGCTGACAAGAATATGGGACTGCATGATGGAATCAATGTTTTTGCTCAAATGGTTGAGAAACACCAAGGATGCAATAATATGGAAAGGTTGGTAAAACTGGTACATGGCCACGTTCAAAATTTTTACCTTGCATTGAAGATTTTGAAGAGATACTGGCCACGG 1386 0.4452 GGSWTNVAEAEQSVKRREEELFKKRREIHTAHSRDKVLEVVPAMVERLCSEFPEALREAKIQTKNLFQLCELCPPMHPCVEDIVVPRSLEYLSRDDAPELQLGSLLVLTSLSSGTHDHRRILLQQGALPLLLKLLTSDTRDDIMQETLCVLGNMADSPYYRLRLLDLGALMPILNLLKSPHSRFSLFKIATFCLSNLVRGKPRVKPALPVLQQLLHSTNEEVVIDACWALSYLLDGQIDIAEDLTEEGVCPKLMELLNRPSETVILPALVALGNIAAGFIAQTQLVLDSQFLPRVYHLLTNEYNKDIHREACWAISNITAGNRDEIQAVIEANIIQILVHALHHDDFDVQKAATRAIFNFTCRGSTFHIRYLAAQGCIRPLCKLLTCSDPVLLSNCLQVLDSFMSVGEADKNMGLHDGINVFAQMVEKHQGCNNMERLVKLVHGHVQNFYLALKILKRYWPR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02988 462 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 126 155 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 236 277 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 322 362 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 365 405 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 157 199 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 115 156 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 201 235 IPR000225 GO:0005515
Pste5g02988 462 SMART arm_5 279 320 IPR000225 GO:0005515
Pste5g02988 462 Coils Coil 7 27 - -
Pste5g02988 462 PANTHER IMPORTIN ALPHA 13 459 - -
Pste5g02988 462 PIRSF Importin_alpha 6 462 IPR024931 GO:0005737|GO:0006606|GO:0061608
Pste5g02988 462 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 197 IPR000225 GO:0005515
Pste5g02988 462 SUPERFAMILY ARM repeat 15 460 IPR016024 -
Pste5g02988 462 Gene3D - 39 460 IPR011989 -
Pste5g02988 462 Pfam Armadillo/beta-catenin-like repeat 245 277 IPR000225 GO:0005515
Pste5g02988 462 Pfam Armadillo/beta-catenin-like repeat 207 234 IPR000225 GO:0005515
Pste5g02988 462 Pfam Armadillo/beta-catenin-like repeat 324 359 IPR000225 GO:0005515
Pste5g02988 462 Pfam Armadillo/beta-catenin-like repeat 282 320 IPR000225 GO:0005515
Pste5g02988 462 Pfam Armadillo/beta-catenin-like repeat 117 155 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02988 Pste-Chr5 22732622 22735653 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02988 5 22732622 22735653 Pste5g02988 5 22732622 22735653 ECH