Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02828 CCCGGTGCACCGTGGAAGGAGCTAAATGGATTCAGCGAAGGCAACGACGGTGGTGGAGGAACAGCGGTTAACTGAATGGCGCATGCGACGTGGCCCCTACCTCGGTGACATCTCGGCTCTCTGTTTTATTCACCTTCCCAATCTATCTCTTCCTTTTCTTCTCGCTGGTTTGGGTTCTGAAATTACTGTGTACGATTTGGAACTGAGTAAGAGAATAAGGTCCTTCTCTGTATTCGAAGGAGTTCGCGTCCACGGAATCGCTTCTAGTTTCCCTCAAGATACTTTAATTGCAGTGTTTGGGGAAACGAGAGTGAAGCTATTTAGCTTCAAATTTGATAGTGTTTCCGGGAGCGTAGAGTTGACGCTCGTTCACTTGTTGCCAAAGTTTGGTCACTGGGTTTTAGATGTTTGTTTCCTCAAGGAATGCTTGCCTCATTCCAATGCGGAGAGTCATTTCCTTGTTGTAGGATGTAGCGACAATTCAGTTCACATTTGGGATATTTTTAGCTGTAATACGGTTCTTCAAGTTCAATCTCCGGTGCGGTGCCTTCTGTACTCAATGCGATTATGGGGTCACAATCTTGAAGTTCTCCAAATTGCGTCTGGTACGATATTTAATGAGATTATTGTTTGGAAAGTTGCCCCTCAACACAGCAAGTCTTCAAGTCATCAAAACAACCATGATCATCAAAGCATTTCATCCTTCAATTACTGCCTGCTAAGGGATCAACTGTATGAGTCTATTCCTGTATGTAAACTTATTGGACATGAAGGTTCAATCGTCCGAATAGCATGGTCATCTTGTGGATCTAAACTGGTATCTGTCTCTGATGACAGGAGTGCGCGTGTTTGGGCTGTTGCTATCGAGAGGGAGCATTCAATGTGCCATGATTCCATTGCCCTTGTCTTATTTGGACATAATGCTCGGTTGATTGTCACTGTCAGTGAGGATTGTACATGTCGCATATGGGGACTTGATGGTAAACAATTGCAAGTCATTAAAGAGCACATTGGAAGAGGTATATGGAGATGTTTGTACGACCCACATTCATCACTTCTTATAACTGCCGGGTTTGACTCTGCTATTAAGGTACATCAACCTCATGCTTCTTTGCCCAGGTGCTTGGAAGCAGCACAACGGTCCCCTAGCAGGACAGAGGTGTTTTCCATTCGCATCCCGAATGTGTTGGATCATATTGGATTGATGGAC 1210 0.4463 MDSAKATTVVEEQRLTEWRMRRGPYLGDISALCFIHLPNLSLPFLLAGLGSEITVYDLELSKRIRSFSVFEGVRVHGIASSFPQDTLIAVFGETRVKLFSFKFDSVSGSVELTLVHLLPKFGHWVLDVCFLKECLPHSNAESHFLVVGCSDNSVHIWDIFSCNTVLQVQSPVRCLLYSMRLWGHNLEVLQIASGTIFNEIIVWKVAPQHSKSSSHQNNHDHQSISSFNYCLLRDQLYESIPVCKLIGHEGSIVRIAWSSCGSKLVSVSDDRSARVWAVAIEREHSMCHDSIALVLFGHNARLIVTVSEDCTCRIWGLDGKQLQVIKEHIGRGIWRCLYDPHSSLLITAGFDSAIKVHQPHASLPRCLEAAQRSPSRTEVFSIRIPNVLDHIGLMD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02828 395 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 276 - -
Pste5g02828 395 PANTHER WD REPEAT PROTEIN 21 387 - -
Pste5g02828 395 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 276 IPR001680 GO:0005515
Pste5g02828 395 Gene3D - 11 231 IPR015943 GO:0005515
Pste5g02828 395 SMART WD40_4 279 316 IPR001680 GO:0005515
Pste5g02828 395 SMART WD40_4 111 158 IPR001680 GO:0005515
Pste5g02828 395 SMART WD40_4 238 277 IPR001680 GO:0005515
Pste5g02828 395 SMART WD40_4 318 358 IPR001680 GO:0005515
Pste5g02828 395 Gene3D - 235 382 IPR015943 GO:0005515
Pste5g02828 395 SUPERFAMILY WD40 repeat-like 27 357 IPR036322 GO:0005515
Pste5g02828 395 Pfam WD domain, G-beta repeat 122 158 IPR001680 GO:0005515
Pste5g02828 395 Pfam WD domain, G-beta repeat 242 276 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02828 134 355 Miscellaneous Gene Families AT5G08390 23.109 2.39e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02828 5 20988670 20999550 Pste5g02828 5 20988670 20999550 ECH