Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02813 GTTCACACTTGAGACTTCAGAGGAGAAGCAAGTAATGGCTGCGATCGCGGGAACGCATGTGTTTGGTGTTGTTAGTTTTCAACTCAAAGAAACCGAATTGCCGTTTGCGCGTTCCAGCTTAATCCGCAAGCGTATTGGAGATTTTCCTCAGCACAATGTGGCTCTAAGGCCCGTAGGAAATGCCACGATTCTTCCCAAAATCAGAGCCCAGAATGTTCCAGACTATGTTCCAGAATCCGAGTTTTATAAAGTAGAAGCCATTCTCAGGTTACAAGCTACGACCCTTGTCTTTTTTGTGGCTCCGGGAGCTTTTTTTACAGTGCCCTGGCGAGTCCCTCAGGTTTCCTCGGGTTTGTTGAAAATGGGAATTCGCGGTGTCACTGTATCTGATGTAAGGGGCTTTGGTGCTCAGGGTGGTTCAACAGAGAGGCAGGGAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTAGTGAGGAAGGACCAGGTTGAGGCAGTAATTGACAAAATTATTGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCTGTCTCAGATGTTATAAGAATTCGGACAGGTGAGCGTGGGGAGCTGGCAGAGAGAATGACTGGGGGTCGAAGTGACATGTTATCTACTTTTACTGTCAAAATGACAGACATTATTGAAAGGGCAGGGCAGTTAACAATGGGCCTCTCTTTCACCAAGCTCTTCAGTCGCCTTTTTGCGAAGAAGGAGATGCGCATACTCATGGTCGGTCTCGACGCTGCCGGTAAGACCACCATTCTCTACAAACTCAAGCTCGGTGAGATCGTCACCACCATTCCCACCATTGGCTTCAATGTCGAAACTGTCGAATATAAGAACATCAGCTTCACTGTCTGGGATGTCGGTGGCCAGGACAAGATCCGTCCTTTGTGGAGACACTACTTTCAAAACACCCAAGGACTTATCTTTGTGGTTGATAGCAATGACCGAGATCGTGTGGTAGAAGCTAGAGACGAGCTGCACAGGATGTTGAATGAGGATGAGTTGAGAGATGCTGTGCTTCTAGTTTTTGCTAACAAGCAAGATCTCCCAAATGCTATGAATGCTGCTGAAATAACTGATAAGCTTGGTCTTCATTCTCTTCGTCAGCGTCACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGACTTTATGAAGGCCTTGACTGGCTCTCAAACAACATTGCAAACAAGGCATAGTCTCATAGTGATTATTGGTCTCGGATTGCTTCAAGTTTCGTTGAGCTTAGCGATTGTTTGATGTGGTTACCCCGTTTAGAATCTTGTCTTCTCTAGCATGTATTATTGTCTTCGGTAAAGAACACATTTTTCTACTGCCTAATATCAAAATAATTTGCATTTTTTCCGTGTATAACCATTGATCTGTGAAGAGTCAATTTTATCATTGAAAGCTTTTACACAATATATTAAACATAAAATTTGCCAGTATATTCCAACGAAGGGTG 1512 0.4425 MAAIAGTHVFGVVSFQLKETELPFARSSLIRKRIGDFPQHNVALRPVGNATILPKIRAQNVPDYVPESEFYKVEAILRLQATTLVFFVAPGAFFTVPWRVPQVSSGLLKMGIRGVTVSDVRGFGAQGGSTERQGDNFVAKVKMEIVVRKDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRIRTGERGELAERMTGGRSDMLSTFTVKMTDIIERAGQLTMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02813 403 SMART P_II_3 97 187 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 PANTHER ADP RIBOSYLATION FACTOR-RELATED 223 398 IPR024156 GO:0005525
Pste5g02813 403 Pfam Nitrogen regulatory protein P-II 97 190 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 CDD Arf1_5_like 240 398 IPR045872 GO:0003924
Pste5g02813 403 SMART arf_sub_2 223 403 - -
Pste5g02813 403 SMART sar_sub_1 223 399 IPR006689 GO:0003924|GO:0005525
Pste5g02813 403 SMART rab_sub_5 240 402 - -
Pste5g02813 403 ProSiteProfiles small GTPase Arf family profile. 233 399 - -
Pste5g02813 403 ProSitePatterns P-II protein C-terminal region signature. 165 178 IPR017918 GO:0006808|GO:0030234
Pste5g02813 403 Pfam ADP-ribosylation factor family 227 399 IPR006689 GO:0003924|GO:0005525
Pste5g02813 403 ProSiteProfiles P-II protein family profile. 88 194 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 236 401 IPR027417 -
Pste5g02813 403 Gene3D - 93 203 IPR015867 -
Pste5g02813 403 SUPERFAMILY GlnB-like 97 193 IPR011322 -
Pste5g02813 403 PRINTS P-II protein signature 134 157 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 PRINTS P-II protein signature 110 128 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 PRINTS P-II protein signature 165 185 IPR002187 GO:0006808|GO:0030234
Pste5g02813 403 Gene3D - 226 403 IPR027417 -
Pste5g02813 403 FunFam ADP-ribosylation factor 1 223 403 - -
Pste5g02813 403 NCBIfam small GTP-binding protein domain 238 373 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02813 Pste-Chr5 20787168 20795327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02813 5 20787168 20795327 Pste5g02813 5 20787168 20795327 ECH