Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02778 ATGGCTCCTTCCCGTCGCAATACCAATGGTCGTTCACCACTCGTCAATCAACAGCGTCAAATCACTTCCTTCTTCAACAAATCCTCTCCCTCTCCCACGCTCCTCAAAACCAACCAAAAAATAAACCCTAGCAACATTTCAGACCCTAACCCTAACCCTAGCCCTAGCCCTAGCCCTAGCCCTAGCCCCACCACTGTCACTCCTTCCCCTCTCAATCCGAAACGGCTCAAGCCCCTTCTTGTCGTCGGCGCTTCCACTTCCCCGCCCTCCGCTTCTCCTTCTCTCTACGGCCAAGAGGTCGTTGGCCGAAGGATCAAGGTTTATTGGCCCTTGGACGATGCCTGGTACGAAGGTTCCGTCAAATCCTTCGATAGCCTCTCCTCCAAACACGTTATTTGTTACGACGATGGCGAAGAGGAATCCCTCGACCTCTCCAAGGAGAACATCCAGTGGTTCCTGGAATCCTCTTCCAAGAACCTTAAACGCCTCCGTCGTGGCGTCCCCGCCGTTAGGAAGATGGTCATTGACGACGAAGAAGTAGAAGAACAGAATAACAAAGGTGAAGAAGAAGATGATGATAATAATGGTGATGATTCCAATGACGAAGATTGGGGGAAGAATGCTGTATTGGAGGATGCTGGGGACGCTGACGAAGATACTGATTTAGAGGAGGAAAACAACGTAGCAGATAGGGCTAAAGGAAAAAAGGTTGAGCCTAAAAAACGGAAACTAAGTGGAACAGAGAAACAAGAGCCTGCAAAAAAGAGTAAGACTGGAGTGGAAGCTGGTAAGAGAGCTTTCAAGTTCTCACTGTTGGAGCCTGCGAGTACTCTGGAGATTACATCTAATGGCGCAGACAACGATGGGATTGCTGAGACTTACGAAAGATTTGCATCTCGTGAAAATCAGAAATTGTTTTTCATGAAAGCAGATCGCAGGGATGCCAAGCGCAGACGACCTGGAGATGAAAATTATGATTCAAGAACTCTCTACTTGCCTCCTGATTTCTTAAGGAGTTTGTCAGATGGCCAGAAACAATGGTGGGAGTTCAAGTCAAAGCATATGGACAAAGTTTTGTTTTTCAAGATGGGTAAATTTTATGAGCTTTTTGAGATGGATGCACATGTAGGAGTGAAGGAGCTTGATTTGCAGTATATGAAGGGAGACCAACCTCATTGTGGTTTTCCAGAAAGGAATTTCTCAATGAATGTGGAGAAACTGGCTAGGAAGGGTTATAGAGTTCTTGTTGTAGAGCAGACTGAAACACCTGAGCAGCTGGAGCTTCGCCGCAAGGAGAAGGGCTCTAAAGATAAGGTTGTAAGACGTGAGATATGTGCAGTGGTTACAAAAGGTACATTAATGGATGGGGAGTTGCTGTCAGCAAATCCTGAAGCTGCATATTTAATGGCCCTGACTGAACATCATGAAAATCATCCAAATGAAATTTCAGAGCATGTCTATGGTGTTTGTATAGTTGATGTTACCACAAGTAGAGTCATTCTTGGACAGTTTAAGGATGACTTGGAGTGCAGTGCCTTGTGCTGTATCTTATCCGAGATCAGGCCTGTTGAAATTGTGAAACCTGCTAAATTTCTTAGTGCTGAAACAGAAAGAGTACTGCTAAAGCATACCAGAAATCCCTTGGTAAATGAATTAGTTCCAACTGTGGAATTCTGGGATGCTGACAAAACTGTGGATCAATTGAAGAGAATTTATGGGAACTATAATGATATTGGTGTTGAAGATGATGGGTTAGATTGCCTGCCAGATGTTTTACTGGATCTGGTGAGAAAAGGTGATGACAGTAGAAGTGCACTTTCTGCTCTAGGTGGCACTCTCTATTATTTGAAACAGGCTTTTCTAGATGAGAGATTGCTCAAATTTGCACGGTTTGAGTTACTTCCATGTTCTGGTTTTGGTGATCTTGCTTCAAAATCCTACATGGTTCTTGATGCATCTACTCTGGAGAATCTTGAGATTTTTGAGAATAGCAGGAATGGAGGTTCTTCAGGCACACTCTATGCCCAACTAAACCAATGTGTTACAGCATTTGGAAAGAGATTGCTAAAGACATGGCTTGCAAGACCATTATGTCATGTGGAGTCAGTTAAGGAACGCCAGGAAGCAGTTACTGGTTTGAAGGGGGTTAATCTACCTTCTGCACTAGAGTTTCGGAAAGCATTATCTAAGCTACCTGACATGGAGCGGTTGCTTGCACACATCTTTTCCTCTAGTGAATCTAGTGGAAGAAATGCTAATAAAGTGGTTCTGTATGAAGATGCAGCTAAAAAGCAATTGCAAGAGTTTATTTCAGCTCTGCGTGGTTGCGAACAGATAGCACAAGCTTGCTCTTCACTTGGTGTCATTTTGAATCATGTCAAATCTAGACAACTTCATCATCTGTTAACACCTGGTAAAGGTCTTCCTGATGTTTGTATGGATCTTAATCATTTCAAGGAGGCCTTTGATTGGGTGGAAGCCAATAACTCTGGCCGTATAATACCTCATGAAGGAGTTGACACCGAGTATGACTCAGCCTGTAAGGCAGTTAAAGAGATTGAGTCCAGTTTATTGAAGCACCTTAAGGAACAGAGAAAACTACTTGGAGACACATCAATTACTTATGTCAACATTGGAAAGGATACATACCTATTGGAAGTGCCAGAAAATTTGTCTAGGAATATTCCTCGGGATTATGAACTGCGTTCTTCCAGAAAAGGCTTCTTTAGATACTGGACTCCAGATATTAAAACATTTTTAAGAGAGCTCTCCCTAGCTCAATCTGAGAAAGAGTCCTTGTTGAAAAGTACTTTGCAGAGATTAGTTGGGCGTTTTTGTGAACATCACACTAAGTGGAAACAGTTGGTTTCTGCAACTGCAGAACTGGATGTCTTGATCAGTTTAGCAATTGCTGGTGACTATTATGAAGGACCAACATGCACCCCTAGTTTTGTAGGCACGTTATGTACAAAAGAAGCTCCTTACCTCCATGCTAAAAGTTTGGGACATCCAGTCCTTAGGAGTGATACCTTAGGCAAGGGTGCCTTTGTACCCAATGACATAACCATTGGTGGTTCAGATCATGCTAGCTTTATTCTTCTAACAGGTCCTAACATGGGTGGGAAGTCAACACTTCTTCGACAAGTTTGCTTGACTGTGATTCTGGCCCAGGTAGGAGCGGATGTCCCTGCAGAAAGTTTTGATTTGTCACCTGTTGACCGTATTTTTGTTCGAATGGGAGCCAAAGATAATATAATGGCCGGCCAAAGTACTTTTTTAACTGAGCTTTCAGAAACTGCAACAATGCTGTTGTCAGCCACTCGTAATTCATTGGTGGCTCTAGATGAGCTTGGGCGAGGGACTGCAACTTCTGATGGGCAAGCCATTGCGGAATCTGTATTAGAACATCTTGTGCGGAAGGTGCAGTGTCGTGGATTGTTTTCTACCCACTATCATCGATTAGCTATAAATTATCTCAAAGATCCAAAGGTTTGTCTCTGCCACATGGCATGCCAAGTTGGGGGTGGAATTGCAGGTTTAGACGAAGTCACCTTTCTTTACAGGCTTACCCCTGGTGCCTGCCCCAAGAGCTATGGTGTTAATGTTGCTCGGATAGCTGGACTTCCAACTTCTGTGCTTCAGAAGGCTGCTACCAAGTCCAGAGAATTTGAGGCCACTTATGGTAAATGCAGAAAAGCGTCTTCTGTAACAGACACTCGCAATAAAAATTGGGTTGATGAGATAGCTGTTATCATACAAAACTTGAACAACGCTGCTACAAATTTGAGTTGCCAGGAAACCATTTGCGTTGGTTCCCTAAGTGAACTTCAAGATAAAGCAAGAGAACTTATGCAGCGATGTTAAACTTATTTCGGTTATTCATTCTTTTGAGAACAGGCAGCATACTTTTATTATGGCCACACTCCACGTTGATATATCAATCTTGATAAGATATGGCCAAGTCTTGCTTGAATGTTGGTTGTCCAACTTATCTGTTTTGTTGAGCGTATGCTTGTAAATAGTTGCACGTAAAATGATTATATACTAAATCAATTGAAGGCTGGCCCATTGTACATGTTTATCAGAGGTTATTATCAAATAGATTTTTTTACAAGATAATACAAATGTGAACTCGCTTGTTCCCTCTATTGGCAAAGAGTTAATCCATTTCGTTTTATTTAACGATA 4187 0.4275 MAPSRRNTNGRSPLVNQQRQITSFFNKSSPSPTLLKTNQKINPSNISDPNPNPSPSPSPSPSPTTVTPSPLNPKRLKPLLVVGASTSPPSASPSLYGQEVVGRRIKVYWPLDDAWYEGSVKSFDSLSSKHVICYDDGEEESLDLSKENIQWFLESSSKNLKRLRRGVPAVRKMVIDDEEVEEQNNKGEEEDDDNNGDDSNDEDWGKNAVLEDAGDADEDTDLEEENNVADRAKGKKVEPKKRKLSGTEKQEPAKKSKTGVEAGKRAFKFSLLEPASTLEITSNGADNDGIAETYERFASRENQKLFFMKADRRDAKRRRPGDENYDSRTLYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGVKELDLQYMKGDQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVRREICAVVTKGTLMDGELLSANPEAAYLMALTEHHENHPNEISEHVYGVCIVDVTTSRVILGQFKDDLECSALCCILSEIRPVEIVKPAKFLSAETERVLLKHTRNPLVNELVPTVEFWDADKTVDQLKRIYGNYNDIGVEDDGLDCLPDVLLDLVRKGDDSRSALSALGGTLYYLKQAFLDERLLKFARFELLPCSGFGDLASKSYMVLDASTLENLEIFENSRNGGSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHVESVKERQEAVTGLKGVNLPSALEFRKALSKLPDMERLLAHIFSSSESSGRNANKVVLYEDAAKKQLQEFISALRGCEQIAQACSSLGVILNHVKSRQLHHLLTPGKGLPDVCMDLNHFKEAFDWVEANNSGRIIPHEGVDTEYDSACKAVKEIESSLLKHLKEQRKLLGDTSITYVNIGKDTYLLEVPENLSRNIPRDYELRSSRKGFFRYWTPDIKTFLRELSLAQSEKESLLKSTLQRLVGRFCEHHTKWKQLVSATAELDVLISLAIAGDYYEGPTCTPSFVGTLCTKEAPYLHAKSLGHPVLRSDTLGKGAFVPNDITIGGSDHASFILLTGPNMGGKSTLLRQVCLTVILAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETATMLLSATRNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLAINYLKDPKVCLCHMACQVGGGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVLQKAATKSREFEATYGKCRKASSVTDTRNKNWVDEIAVIIQNLNNAATNLSCQETICVGSLSELQDKARELMQRC 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02778 1287 Gene3D - 98 151 - -
Pste5g02778 1287 Gene3D - 814 945 - -
Pste5g02778 1287 MobiDBLite consensus disorder prediction 171 260 - -
Pste5g02778 1287 SUPERFAMILY Tudor/PWWP/MBT 100 141 - -
Pste5g02778 1287 MobiDBLite consensus disorder prediction 48 68 - -
Pste5g02778 1287 Pfam MutS domain III 653 969 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 Pfam MutS domain V 1033 1223 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 Gene3D - 648 969 - -
Pste5g02778 1287 Gene3D - 980 1257 IPR027417 -
Pste5g02778 1287 SMART DNAend 668 1009 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 SUPERFAMILY DNA repair protein MutS, domain I 329 452 IPR016151 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 CDD Tudor_Agenet_AtEML-like 101 151 - -
Pste5g02778 1287 Pfam MutS domain II 467 622 IPR007860 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 MobiDBLite consensus disorder prediction 1 47 - -
Pste5g02778 1287 SUPERFAMILY DNA repair protein MutS, domain III 651 972 IPR036187 -
Pste5g02778 1287 MobiDBLite consensus disorder prediction 181 199 - -
Pste5g02778 1287 FunFam DNA mismatch repair protein 93 147 - -
Pste5g02778 1287 FunFam DNA mismatch repair protein 980 1254 - -
Pste5g02778 1287 MobiDBLite consensus disorder prediction 226 260 - -
Pste5g02778 1287 Pfam MutS family domain IV 838 927 IPR007861 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 MobiDBLite consensus disorder prediction 1 76 - -
Pste5g02778 1287 FunFam DNA mismatch repair protein 298 461 - -
Pste5g02778 1287 PIRSF Msh6 2 1272 IPR017261 GO:0006298|GO:0030983
Pste5g02778 1287 FunFam DNA mismatch repair protein 814 945 - -
Pste5g02778 1287 SMART mutATP5 1029 1221 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 Gene3D DNA repair protein MutS, domain I 298 460 IPR016151 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 Gene3D MutS, connector domain 465 646 IPR036678 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 992 1224 IPR027417 -
Pste5g02778 1287 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 344 1240 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Pste5g02778 1287 SUPERFAMILY DNA repair protein MutS, domain II 462 663 IPR036678 GO:0005524|GO:0006298|GO:0030983
Pste5g02778 1287 Pfam MutS domain I 344 456 IPR007695 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02778 Pste-Chr5 20063798 20073388 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02778 5 20063798 20073388 Pste5g02778 5 20063798 20073388 ECH