Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02734 CGGCAATTGGAGCGGAGAAAAAGACCGTCCAATGAATGAGAAATAAAAAAGATAGGCAATGCGAAAATGATGTGATGTGGCACGTGTGTAAAGCGAAAAGAAAAGTAAAATGAGAGAAGCATAGGAAAAAGGGCACGCCCGAGTCGGAGTTGGAGTTGGAGTTGGAGTTGGAGTTTGCCATGCTTGTCCCATGTCCGTGACCGTCAGAGAAGGACTTAAGCTTTTTCAATCAACCTCTTCTTTTTTGTTTTTAACTCACTCACTCACTCTCCTTCCTTATGGCCTCCTGATCCACCTCTCTTTGGTAACTCCTAACTCCATCCATTCTACTTCCCAATTACTCCCTTTACTTCCCCTCTTTTCTTTTTACCTACCATTCCCTTCTTTTCTTTCTGCTTCATTCAGTAAACCTCACCCACTCCTTTTCCTTTTTCCTCTCTCAACTCCTTTTTTAGGGTTTATTTTCCCAGTTAATGCTTCTTTCTTCACTTGTTGACTTTATTACTTTCAATTTGCAAGGTTTCTGAAATAATACAATTCAGATACATGGATTATAATTTATTTTTATGCCTGTTATCACAGATCGTTCGCACGGGATGGAGTCATGTGATTGTATAGATACGCAATATCCGCCAGATGAACTTCTGGTTAAGTATCAGTATATCTCGGATGTGCTAATTGCTCTTGCGTATTTTTCAATTCCGGTGGAGCTGATCTATTTTGTTCAGAAATCTGCTTTCTTTCCATATAGATGGGTGCTTATGCAGTTTGGTGCTTTTATTGTTCTCTGTGGGGCAACTCATTTCATAAACTTGTGGACATTCTCCCCTCACTCTAAAGCCGTTGCTGTTGTCATGACTATTGCCAAAGTGTCCTGTGCTATTGTGTCGTGTGCCACAGCTCTGATGCTTGTCCATATTATTCCTGATCTGTTGAGTGTCAAGACGCGTGAATTGTTCCTCAAGAACAAGGCTGAAGAGCTTGATAGGGAGATGGGACTTATTCTTACTCAAGAGGAGACAGGAAGGCATGTTAGAATGTTGACTCATGAAATTAGGAGCACCCTTGACAGACATACTATTTTGAAGACTACCCTTGTGGAGCTGGGGAGGACTTTAGGCTTGGAGGAGTGTGCGTTGTGGATGCCTTCAAGAAGTGGTCTTAATTTGCAACTTTCCCATACTTTAAGCTACCATGTACAAGTTGGATCTACTGTGCAGACAAACAATCCTATTGTCAATGAAGTTTTCAACAGCCCTCGCGCTATGCGGATACCACCCACCTGTCCACTGGCCAGGATTAGACCTCTTGTAGGAAGATATGTGCCACCTGAAGTTGTTGCTGTTCGGGTGCCACTTTTAAATCTCTCAAATTTTCAAATTAATGATTGGCCTGATCTTTCAGCAAAAAGCTATGCAATCATGGTTCTCATCCTCCCCACCGATAGTGCTAGAAAATGGAGAGACCATGAGTTGGAACTTGTTGACGTGGTTGCGGATCAGGTAGCAGTTGCCCTTTCACATGCTGCTATTTTGGAGGAGTCAATGCGAGCCCGCGATCAACTCATGGAGCAGAATGTTGCTTTAGATTTGGCTCGGAGAGAGGCAGAGATGGCAATTCATGCTCGCAATGATTTTCTTGCCGTCATGAATCATGAAATGAGGACCCCAATGCATGCAATTATAGCATTGTCGTCACTTCTCTTGGAGACTGAACTGACTCCGGAGCAGAGGGTTATGATAGAGACAGTGTTGAAGAGTAGTAATATTTTGGCGACACTCATTAATGATGTTCTAGATCTTTCTCGACTTGAAGATGGTAGCCTTGAATTAGAAATGGGAAAATTCAACCTTCACAGTGTTTTGGGAGAGATCGTTGAACTGATAAAGCCAATAGCATCTGTGAAAAAATTACCTATTACTTTAATTCTGGCTCCGGATCTTCCTACTCATGCCGTTGGTGATGAAAAGAGGCTTACGCAAACTCTTTTGAATGTTGTGGGTAACGCTGTCAAATTCACGAAGGATGGATATGTTTCTATAAGAGCATCTGTTGCAAAACCAGAATCTTTACAGGATTGGCGACCTCCTGAGTTTTATCCAGCATCAAGTGATGGCCATTTCTACATACGAGTCCAGGTTAAGGACTCTGGATGTGGGATTCCCCCACAAGATATTCCACATCTCTTCACCAAGTTTGCTCAGTCTCGGAGTGGGCCAGCTCGACCTAGCAGTGGTGCAGGTCTCGGGCTTGCAATTTGTAAAAGATTTGTAAACCTCATGGGAGGTCACATATGGATTGAGAGCGAGGGCCTTGATAAAGGAAGCACAACTACATTTATAGTCAAACTTGGGATTTGTGGCAACCCAGATCCATCAGATCATCAAGCTGTAAACAGAAGCCAAGCATATAGTGGAAGTGGTGGCCTAGCTAGATTCAAACCCTTTATTAAAGATGAAGACGACACTGGCTTTTCTACTCGCCGAAATCAAAGAAGTTTCTAATGTCCGAGACATCAAAATTGCATACCTTTCTATCACAGTCGACAAGATGTAGTATAAACATACTTTCATTTTGCATGTGCTAAATTGTATAATTTGCAGTTTGCTACTGTAGATTAGGATTACTATGTTTTCTAACGAACAGTTCTTATCCGAGCTACTGCCCTATTAACTAGAATACAATACAATGAAACAAAGTTTAGATAATTTCACTTGAGTTGGTC 2725 0.4198 MPVITDRSHGMESCDCIDTQYPPDELLVKYQYISDVLIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSPHSKAVAVVMTIAKVSCAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRSGLNLQLSHTLSYHVQVGSTVQTNNPIVNEVFNSPRAMRIPPTCPLARIRPLVGRYVPPEVVAVRVPLLNLSNFQINDWPDLSAKSYAIMVLILPTDSARKWRDHELELVDVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETELTPEQRVMIETVLKSSNILATLINDVLDLSRLEDGSLELEMGKFNLHSVLGEIVELIKPIASVKKLPITLILAPDLPTHAVGDEKRLTQTLLNVVGNAVKFTKDGYVSIRASVAKPESLQDWRPPEFYPASSDGHFYIRVQVKDSGCGIPPQDIPHLFTKFAQSRSGPARPSSGAGLGLAICKRFVNLMGGHIWIESEGLDKGSTTTFIVKLGICGNPDPSDHQAVNRSQAYSGSGGLARFKPFIKDEDDTGFSTRRNQRSF 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02734 645 SMART gaf_1 168 327 IPR003018 GO:0005515
Pste5g02734 645 FunFam Ethylene response sensor 146 318 - -
Pste5g02734 645 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 407 595 IPR036890 -
Pste5g02734 645 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 11 633 - -
Pste5g02734 645 CDD HATPase_EvgS-ArcB-TorS-like 470 595 - -
Pste5g02734 645 Pfam GAF domain 168 317 IPR003018 GO:0005515
Pste5g02734 645 CDD HisKA 351 414 IPR003661 GO:0000155|GO:0007165
Pste5g02734 645 Gene3D - 319 417 - -
Pste5g02734 645 Pfam His Kinase A (phospho-acceptor) domain 354 418 IPR003661 GO:0000155|GO:0007165
Pste5g02734 645 FunFam Ethylene receptor 1 418 600 - -
Pste5g02734 645 Gene3D - 418 598 IPR036890 -
Pste5g02734 645 FunFam Ethylene receptor 1 320 416 - -
Pste5g02734 645 Gene3D - 148 318 IPR029016 -
Pste5g02734 645 SMART HKATPase_4 465 599 IPR003594 -
Pste5g02734 645 PRINTS Bacterial sensor protein C-terminal signature 556 574 IPR004358 GO:0016310|GO:0016772
Pste5g02734 645 PRINTS Bacterial sensor protein C-terminal signature 539 549 IPR004358 GO:0016310|GO:0016772
Pste5g02734 645 PRINTS Bacterial sensor protein C-terminal signature 521 535 IPR004358 GO:0016310|GO:0016772
Pste5g02734 645 ProSiteProfiles Histidine kinase domain profile. 360 597 IPR005467 -
Pste5g02734 645 SMART HisKA_10 353 418 IPR003661 GO:0000155|GO:0007165
Pste5g02734 645 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 595 IPR003594 -
Pste5g02734 645 SUPERFAMILY GAF domain-like 168 329 - -
Pste5g02734 645 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 339 419 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02734 Pste-Chr5 19493310 19497764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02734 11 604 Miscellaneous Gene Families AT2G40940 78.114 0.0 941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02734 5 19493310 19497764 Pste5g02734 5 19493310 19497764 ECH