Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02687 CGGGCCTTAAACCCTGGGGCAAGGGAGAGTAGAGAGTAGAGAGTAGAGAGAGGCGAATGTTATAAGGAAGCTGTCCTTGGTCTCTGAATTGTGAAGTACATCAAGGGCATGCTTCCTCTCTCCCTTCTCAAGACTGCCCAAGGGCACCCTATGTTGGTGGAACTGAAAAATGGGGAGACTTACAACGGCCATTTGGTTAATTGCGATACATGGATGAACATCCATCTCCGAGAAGTCATTTGTACATCTAAAGACGGAGATAGATTTTGGAGAATGCCTGAATGCTACATACGAGGCAATACAATCAAATACCTTCGTGTTCCTGATGAGGTTATCGACAAAGTTCAAGAAGAAACCAAGAGCCGTGCAGCTAGACATTCTCTGATTAATATCTCACCTTTTTCAGATCGCAAACCACCTGGCGTGGGGCGTGGTAGGGGAAGAGGAAGAGAGGAAGGGACTAGTGGACGCCCAGCAAAGGGAATTGGACGTGGTCTTGATGATGGTGGTTCTAAGGGAGCCGGAGGAGGCCGAGGCAGGGGTGGCCCTGGTGGAAAACCTGGCGGAAACAGAGGGAGAGGTAGAGCTTGATTATAACAAGTGGCATGAATTCCATCAGATGGGCAAGGTAGCACTTTCACTGGCATTTGTGCTTGTTTTAAATGTGTATCGGTAGTAACTTCACTGCCTGTGTTTCCTGTGCATCCTTTGATTTTACTTCCAATGTTTTTCGTGTGTTTATGATCACAAAATGTTGGTGCTATTATATTACCCGAGGAAAGTTTCTCTGCCCCCGTGTCCTTTTTAATACCCTTCTCAACGGCAAACGTGTCTTTCTCCTTCTTCCATTGAAAGAGTAATGATGGCGCAATGTTAGGATGCTGCTTTCACAAAATACTCGACCTTGGTATATTCAGAGATGCTGCTTTTGCAATTGTACATGAAACAGTTTTAGGATCTTAACTTGAACTCGTGTTCTAATGAAAAAATTATTAGATGGTATTCAACCATCA 1013 0.4482 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRAARHSLINISPFSDRKPPGVGRGRGRGREEGTSGRPAKGIGRGLDDGGSKGAGGGRGRGGPGGKPGGNRGRGRA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02687 160 MobiDBLite consensus disorder prediction 105 121 - -
Pste5g02687 160 SMART Sm3 5 71 IPR001163 -
Pste5g02687 160 ProSiteProfiles Sm domain profile. 2 75 IPR047575 GO:0003723
Pste5g02687 160 SUPERFAMILY Sm-like ribonucleoproteins 3 127 IPR010920 -
Pste5g02687 160 FunFam U6 snRNA-associated Sm-like protein LSm4 1 83 - -
Pste5g02687 160 Gene3D - 1 83 - -
Pste5g02687 160 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 2 140 IPR027141 GO:0006396
Pste5g02687 160 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Pste5g02687 160 MobiDBLite consensus disorder prediction 82 160 - -
Pste5g02687 160 Pfam LSM domain 6 70 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02687 Pste-Chr5 18905230 18908151 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02687 5 18905230 18908151 Pste5g02687 5 18905230 18908151 ECH
Pste4g01790 4 13354653 13355303 Pste5g02687 5 18905230 18908151 PCT