Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02668 ATGGGTGGTGTAGGGCCAAAACTGAAGAAGTTTGATATAAAGATTGAGAAGAGTTTACCTGCTGTGCGAGATCAGCTCATTGCCATCAACATTGCATCGTCGAGCTTCCTTCCAAATGCTTACCAACCAACCTACAGTTCTTCTCTTTCAAATCCGCCAAACGCCCACCTTTTACTGTCAATTGGTTGCGTCGAAGTGGACGTCCCTATTTTATCACCATGTTCGTTTCCTCCCATGCTTCTTGTGGCCATAGACACACATCTAGCTCCCAATGTCCTTTGCATGGGTCTAGTAGACATTGTTGATGGTTCTGGTGTGTTTACTTTAGAAATGGAGTTACCTGAAGGTAGTGCTTTAGAAGATTTTGATAATAATTCACAGCTTATAGATATGTCTGGTCACTGGGGCATTCTTGTTTCAGATCCATGGCTTCAAAACCAGTTCACTCAGGCCGAGCTTCGCAGCTTGAAATCCCAATTTGTGAGCATGAGGAGGGAGAGTGGAAGGCTTACGGTTGGAGACTTGGCTTCCAAGATGTCAAGGTTGAAGGTTGTGGGGGAGAATCTGAGTGAAGAAGAGAGAGGTTCTTATATTCAGGATTTGTATCAGAACACAAGTGAAGATGTCGATTTTGAATTGTTTCTCAAGGTTTACTTGAAACTTCAAACTTTTGCAAGTTCAAGGACAGGGGATAATGCAAAAAACTCCTCAGCATTCCTCAAGGCTGCCACTACCACATTGCTTCACACAATCAGCGAATCGGAGAAGGCATCATATGTTGCACATATAAATAACTATCTTGCAGGAGATGAATTCCTCAAGAAATGCCTTCCTATTGATCCTTCAACCAATGACCTATTCGAAATTGCCAAAGATGGTGTTCTTCTTTGTAAGCTTATCAATGTGGCAGTTCCGGGGACCATTGACGAACGGGCAATCAATACAAAAAGATTACTAAATCCATGGGAAAGGAATGAAAACCACACACTTTGTCTAAACTCTGCTAAAGCAATTGGATGTACAGTAGTCAATATTGGAACACAAGACTTCATTGAAGGAAGGCGTCATCTGGTGCTTGGATTGATTTCGCAGATTATTAAGATACAATTATTAGCGGACCTGAACCTAAAGAAAACGCCACAGCTTGTGGAGTTGATCAATGACAGTGAGGGTATGGAAGAGTTGATGAGTCTAGCACCAGAAAAAATCTTATTGAGGTGGATGAATTTTCATTTGAAGAAAGCAGGTTACAAGAAGATAGTCACGAACTTCACCACTGATGTTCGGGATGCAGAAGCTTATGCTCACCTTCTGAATGTTCTTGCACCTGAATACACTAATCCATCCACATTGGCTGTTAAAAATCCGTATGAACGAGCAAAACTAGTACTTGAACATGCTGATAAGATGGGTTGCAAGCGATACATCACTGCAAGAGATATAGTGGAAGGCTCCCCTAATCTTAACCTTGCTTTTGTGGCACATATTTTCCAACACAGGAATGGACTTTCAACCCAAACAAAACAGAGTTCTCTCCTTGAAAACTTGCTAGATGACACTCAAGACTCTAGAGAAGAGAGAGCATTTCGCCTTTGGATTAATAGCCTCGGAAATTCAACATATATCAACAATGTCTTTGAGGATGTCAGAAACGGGTGGGTACTTTTAGAGACTCTTGACAAGGTGTCACCAGGGATTGTTAATTGGAAGATTGCTAACAAGCCACCTATTAAGTTGCCTTTTAAGAAAGTAGAGAATTGCAACCAAGTTGTGAAAATAGGGAAACAACTTAAATTTTCCCTGGTAAATGTTGCTGGGAATGACATTGTGCAGGGTTATAAAAAATTAATACTGGCATATTTGTGGCAATTGATGCGATACAACATCCTACAACTTCTAAAGAACTTGAGATTTCACTCTCATGGGAAGGAAATAAATGATGCTGATATTCTGCGATGGGCAAACAGCAAAGTGAGCAGCTCAGGAAGTCAAAGCATAATGAATAGTTTCAAGGATAGAAGTTTATCAGATGGAATTTTTTTCCTTGAGCTTCTTAGTTTTGTGCAACCTAGAGCTGTAAATTGGGGTCTCGTAACAAAAGGAGTAACTGATCAAGAGAAAATGATGAATGCCACCTACATTATCAGTATTGCAAGAAAGCTTGGATGTTCAATATTCTTGCTTCCTGAAGACATCACTGAGGTGAATCAAAAGATGATCCTTACACTAACAGCTAGTATAATGTATTGGTTCTTAAAACACCCTTCTGAGGAAAGAACAATAGGAATTTCAGACAGTGAGAGTGGGAGTCAATTGGACACTACATCAATTTCAACACTGGATGACTCTGCTTCTGATTCATCAATGGAAGAAAATGGGAGTATGTAAATACAGTTGTGAACAAGTTTTTGTTGTGATTGATGATATATAAATAATTGAAACCACTCATCATAGTTTATGAAAAGATCAAT 2471 0.3982 MGGVGPKLKKFDIKIEKSLPAVRDQLIAINIASSSFLPNAYQPTYSSSLSNPPNAHLLLSIGCVEVDVPILSPCSFPPMLLVAIDTHLAPNVLCMGLVDIVDGSGVFTLEMELPEGSALEDFDNNSQLIDMSGHWGILVSDPWLQNQFTQAELRSLKSQFVSMRRESGRLTVGDLASKMSRLKVVGENLSEEERGSYIQDLYQNTSEDVDFELFLKVYLKLQTFASSRTGDNAKNSSAFLKAATTTLLHTISESEKASYVAHINNYLAGDEFLKKCLPIDPSTNDLFEIAKDGVLLCKLINVAVPGTIDERAINTKRLLNPWERNENHTLCLNSAKAIGCTVVNIGTQDFIEGRRHLVLGLISQIIKIQLLADLNLKKTPQLVELINDSEGMEELMSLAPEKILLRWMNFHLKKAGYKKIVTNFTTDVRDAEAYAHLLNVLAPEYTNPSTLAVKNPYERAKLVLEHADKMGCKRYITARDIVEGSPNLNLAFVAHIFQHRNGLSTQTKQSSLLENLLDDTQDSREERAFRLWINSLGNSTYINNVFEDVRNGWVLLETLDKVSPGIVNWKIANKPPIKLPFKKVENCNQVVKIGKQLKFSLVNVAGNDIVQGYKKLILAYLWQLMRYNILQLLKNLRFHSHGKEINDADILRWANSKVSSSGSQSIMNSFKDRSLSDGIFFLELLSFVQPRAVNWGLVTKGVTDQEKMMNATYIISIARKLGCSIFLLPEDITEVNQKMILTLTASIMYWFLKHPSEERTIGISDSESGSQLDTTSISTLDDSASDSSMEENGSM 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02668 795 FunFam Fimbrin-2 like 519 636 - -
Pste5g02668 795 Gene3D - 519 636 IPR036872 -
Pste5g02668 795 ProSiteProfiles Calponin homology (CH) domain profile. 398 501 IPR001715 GO:0005515
Pste5g02668 795 Gene3D - 637 749 IPR036872 -
Pste5g02668 795 Gene3D - 249 375 IPR036872 -
Pste5g02668 795 Pfam Calponin homology (CH) domain 647 751 IPR001715 GO:0005515
Pste5g02668 795 Pfam Calponin homology (CH) domain 275 368 IPR001715 GO:0005515
Pste5g02668 795 Pfam Calponin homology (CH) domain 399 500 IPR001715 GO:0005515
Pste5g02668 795 Pfam Calponin homology (CH) domain 525 628 IPR001715 GO:0005515
Pste5g02668 795 ProSitePatterns Actinin-type actin-binding domain signature 1. 525 534 IPR001589 -
Pste5g02668 795 SUPERFAMILY Calponin-homology domain, CH-domain 251 749 IPR036872 -
Pste5g02668 795 PANTHER FIMBRIN/PLASTIN 134 753 IPR039959 GO:0051015|GO:0051017
Pste5g02668 795 FunFam Fimbrin-2 like 249 375 - -
Pste5g02668 795 MobiDBLite consensus disorder prediction 762 795 - -
Pste5g02668 795 FunFam Plastin-3 isoform 1 639 749 - -
Pste5g02668 795 FunFam Fimbrin-2 isoform A 376 504 - -
Pste5g02668 795 ProSiteProfiles Calponin homology (CH) domain profile. 644 752 IPR001715 GO:0005515
Pste5g02668 795 SMART ch_5 525 627 IPR001715 GO:0005515
Pste5g02668 795 SMART ch_5 400 499 IPR001715 GO:0005515
Pste5g02668 795 SMART ch_5 646 750 IPR001715 GO:0005515
Pste5g02668 795 SMART ch_5 255 368 IPR001715 GO:0005515
Pste5g02668 795 Gene3D - 376 504 IPR036872 -
Pste5g02668 795 ProSiteProfiles Calponin homology (CH) domain profile. 523 629 IPR001715 GO:0005515
Pste5g02668 795 CDD CH_AtFIM_like_rpt3 521 634 - -
Pste5g02668 795 ProSiteProfiles Calponin homology (CH) domain profile. 253 370 IPR001715 GO:0005515
Pste5g02668 795 CDD CH_AtFIM_like_rpt1 254 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02668 Pste-Chr5 18803514 18822327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02668 131 754 EF-hand Containing Proteins AT5G55400 65.495 0.0 859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02668 5 18803514 18822327 Pste7g00464 7 4408915 4418707 PCT