Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02635 CTTCCACAAACAAGTAACAACTCTGCACTAATGTACGCGCCTACCGCTTCTTTATCCGGTTACTCTGTGGCCATGAATAGCTTAACGGCGAGTTTCGCAGCCCGAATATGCACCACTCGCCGCGACCTACTTCCTATACAACACCGTTCCTTTCATCCTTTCATTACCAGACGCTTCGCCACCAAGCTCGCACCTCCAAGAATAGTTTGCATGGCGGAACCTTATCTGATAACGAAACTGGAGTCTGCTGAGAAAACGTGGAAAGAATTATCGGTCAAGCTCGCGGATCCAGATGTTGTGTCTGATCCAAAGGAGTATCAGAAGTTAGCACAATCAGTGGCAGAGCTTGATCAGGTTGTGTCCACGTACAGGAGATTTAAAGACTGTGAAAAGCTTCTAGAAGAAACAAAAGCTTTAGCGAAGGATGATGGCAACGATGAGGATATGGTGGAAATGATATCTTATGAAATCAACTCTTTGTCAAAGCAACTTGCAGAGCTAGAGGACCAGCTTAAGGTATTACTACTTCCAAGTGATCCTCTGGATGCTAGAAACATAATGCTTGAAGTACGAGCTGGCACTGGTGGTGACGAGGCTGGAATATGGGCCGGTGATCTTGTTCGAATGTATGAAAGATATAGTGAAAGGAATTCTTGGAAGTATTCTCTTGTCTCAAGCTCTGCGGCAGAAAAAGGAGGATACAAAACTTATGTGATGGAGATAAAAGGAAATCGTGTTTACAGTAAATTGAAATATGAATCCGGTGTCCACCGAGTTCAACGTGTTCCTCTAACAGAAACACAGGGCCGGGTACATACTTCTACTGCAACAGTGGCCATCATGCCAGAGGCTGATGAAGTTGAAATTGTAATTGACCCAAAAGATATTGAACTGACAACTGCACGATCTGGGGGTGCTGGAGGCCAGAATGTTAACAAGGTTGAAACTGCCATTGATCTCTTCCATAAACCAACGGGAATCCGCATCTTTTGTACTGAAGAAAGGACACAACTTAAGAATAAGAACCGTGCTTTTCAGTTGCTCCGAGCAAAACTATATGAGATGAAAGTAAGGGAGCAGCAAGAGTCATTACGAAATCAAAGGAAATCACAGGTTGGTACAGGTGCACGTGCAGAAAAAATTCGAACATACAACTATAAGGACAACAGGGTTACTGACCACCGATTGAAGATAAACTATGAGCTCACCTCTTTTCTTGATGGTGATATAGAAAATGCGGTTGAGTCTTGTGCTGCAATGGAGCAAAAGGAACTTCTGGAAGAACTTGCTGAATCTGTTGGTGCTCCGGCTGGCTGATATGCAGCATATTTTGCCCAAGTGATTTGAAAATTTTTGCTGGAATGCTTTTCGTAATGGCAGATCCGCCATAGTTTTGGTCTCCTGAATGTGGCCTATCATCTCAAGTGTGAGACAGTGGATCGAGTTGATTGATTGTCTGTGTGTAGTAGATAGAGGGCACTTTTACATGTAGTATATAATATACTCTACAAAAGTGTTTCATTATGTAAAGTGATGCAATTGACTTTTGCATTTTTGTGCTTGTTCATTATGCATGGTTTTGAACCGAGAATTCAATTCCCATTTCTC 1608 0.4272 MYAPTASLSGYSVAMNSLTASFAARICTTRRDLLPIQHRSFHPFITRRFATKLAPPRIVCMAEPYLITKLESAEKTWKELSVKLADPDVVSDPKEYQKLAQSVAELDQVVSTYRRFKDCEKLLEETKALAKDDGNDEDMVEMISYEINSLSKQLAELEDQLKVLLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVRMYERYSERNSWKYSLVSSSAAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEADEVEIVIDPKDIELTTARSGGAGGQNVNKVETAIDLFHKPTGIRIFCTEERTQLKNKNRAFQLLRAKLYEMKVREQQESLRNQRKSQVGTGARAEKIRTYNYKDNRVTDHRLKINYELTSFLDGDIENAVESCAAMEQKELLEELAESVGAPAG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02635 428 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 292 308 IPR000352 GO:0003747|GO:0006415
Pste5g02635 428 SUPERFAMILY Release factor 75 416 IPR045853 -
Pste5g02635 428 SMART PCRF_a_2 128 243 IPR005139 GO:0006415
Pste5g02635 428 Coils Coil 140 160 - -
Pste5g02635 428 Hamap Peptide chain release factor 1 [prfA]. 66 420 IPR004373 GO:0006415|GO:0016149
Pste5g02635 428 PANTHER LD18447P 61 422 - -
Pste5g02635 428 FunFam Peptide chain release factor 1 344 423 - -
Pste5g02635 428 Gene3D - 342 426 - -
Pste5g02635 428 Pfam RF-1 domain 275 385 IPR000352 GO:0003747|GO:0006415
Pste5g02635 428 Pfam PCRF domain 74 268 IPR005139 GO:0006415
Pste5g02635 428 Gene3D - 60 170 - -
Pste5g02635 428 Gene3D - 282 341 - -
Pste5g02635 428 Gene3D - 172 281 - -
Pste5g02635 428 FunFam Peptide chain release factor 1 172 282 - -
Pste5g02635 428 NCBIfam peptide chain release factor 1 62 421 IPR004373 GO:0006415|GO:0016149
Pste5g02635 428 FunFam Peptide chain release factor 1 282 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02635 Pste-Chr5 18610419 18616411 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02635 5 18610419 18616411 Pste5g02635 5 18610419 18616411 ECH