Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02617 TAATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAAGGAAATGGAGTGGGCTTTAAGGGGTATGGGCTGTAACCCTTCAGTCCCAGCAGTTTTCATAGGTGGAAAATTTGTGGGCTCATCCAAAGATATCATATCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAAGGCCATCTGCGAGGAACGTGCATGGCGCGCCTTCCTAACCTTAGACAAAAAGGTACTTGCTCAGTGTATCAGGATGGACAAAGTGATGCAGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCTCTAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCATGAGCTTGGGGTGCGTCCTGTGGTTCATGAGATTGATCATTACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGCTAGGCTGCACTGCTCCAGTCCCCGCTGTGTTCATTGGAGGGAAACTAATGGGATCAACCAATGAAATCATGTCCCTCCACCTAAGTGGTTCACTCACTCCGCTGCTGAAACCTTACCAGCCTTTGTCC 671 0.468 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGKEMEWALRGMGCNPSVPAVFIGGKFVGSSKDIISLHVDGSLKQLLMDAKAICEERAWRAFLTLDKKVLAQCIRMDKVMQLASEKGVVIFSKSSCCLCYAVNILFHELGVRPVVHEIDHYPEGREMEKALLRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTPLLKPYQPLS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02617 223 NCBIfam glutaredoxin-like family 4 100 IPR011905 -
Pste5g02617 223 NCBIfam glutaredoxin-like family 127 220 IPR011905 -
Pste5g02617 223 Gene3D Glutaredoxin 1 106 - -
Pste5g02617 223 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Pste5g02617 223 SUPERFAMILY Thioredoxin-like 123 219 IPR036249 -
Pste5g02617 223 CDD GRX_GRXh_1_2_like 12 93 - -
Pste5g02617 223 ProSiteProfiles Glutaredoxin domain profile. 123 223 - -
Pste5g02617 223 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Pste5g02617 223 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Pste5g02617 223 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Pste5g02617 223 FunFam Glutaredoxin family protein 123 223 - -
Pste5g02617 223 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Pste5g02617 223 CDD GRX_GRXh_1_2_like 135 215 - -
Pste5g02617 223 Pfam Glutaredoxin 14 75 IPR002109 -
Pste5g02617 223 Pfam Glutaredoxin 135 196 IPR002109 -
Pste5g02617 223 Gene3D Glutaredoxin 121 222 - -
Pste5g02617 223 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02617 Pste-Chr5 18500475 18505322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02617 123 217 Miscellaneous Gene Families AT4G15670 51.579 3.68e-33 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02617 5 18500475 18505322 Pste5g02617 5 18500475 18505322 ECH