Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02548 GAATGCTCTTCTGCCAAGTCAGGTCCCTCTTCGTCTCCCTCCACCTCGCGTTACTACCTCTCCAAGTGTGTTCTCAGAGGAAGCGTCGTTCTTCATGTTCTCCACGCTCACATCCGTTCTCCCTCCTCAAACGACGTCATTTTCGGCAAGGAGACGTCAATTGAATTGGTGGTTATCGATGAAGATGGGAATGTGCAATCCGTGTGTGATCAGCCTGTCTTTGGCATCATCAAAGATCTTGCCATAATTCCCTGGAACGAGAAATTTCGTTCACGTGATCCGCAGCTGTGGGGTAAAGACCTCTTGGTTGCTACATCGGATTCTGGGAAGCTGTCCTTGCTCACATTTTGCAATGAAATGCACAGGTTTGTTTCGTTGATTCCAGGTGATGTATCTTCTGGTCACAAAAATTCCTGGAAAGCATCTATTTTGTCTTTCTTGTTATCTCTGAATTCATTATCTGTGAATGGGACAGAGGACCTGAAGCGCGGATGCTATGCACTCTGCCACAGATATCCTCCTTCAGTCCATAAGCGAAATACCCTAAATATTGGTCGTCAGGCAAGCCCATCACCTGGGCTGTTAACTGTTCAAAATACTAGAATTGAATATCCTTCTGAAAGTGAAAGTGGAGGGACTGCAAGTACTTCTAGAAGCATTCAGAGAACCAGCAATATACGTGGTACTATTTGGAGCATCTGCTTCATCTCACAAGATTCCAGACAACCATGCAAGGAGCATAATCCTGTACTAGCTGTTATTATAAATAGGAGGGGAGCACTTCTCAATGAATTGCTATTGTTGCAATGGAATGTTAAAGCTCGTAAAATATTTGTTATTTCTCAGTATGTTGAAGCTGGGCCTCTAGCACATGACATTGTTGAAGTTCCTAACTCTGGGGGACTTGCATTTCTATTTAGGGCTGGTGATATTCTCTTAATGGATCTCAGAGATCATCGCAATCCATCATGTGTCTATAAGACTAACTTAAATTTTTTACCCAATGCCATGGAAGAGCAAACTTATGTGGAAGACTCTTGTAAATTGCATGATGTTGACGATGAACGCTTTAGCGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATTGACAGTGAAAATAGTGGCACTAATTCAGGTTACAAATACGTATGCTCATGGAGTTGGGAACCTGAAAACAATAGAGATCCTAAGATGATCTTCTGTGTGGATACTGGGGAGTATTTTATGATTGAAGTTCTTTTTGATTGTGAAGGCCCTAAAGTTAATTTGTCTGAGTGTCTCTATAAAGGTCTACCTTGTAAAGCACTTTTGTGGGTTGAAGGTGGATATCTAGCTGCCCTTGTGGAAATGGGGGATGGTGTGGTCCTGAAATTGGAAGATGGAAGGCTAAGCTATGCAAACCCTATTCAAAATATTGCACCAATCTTGGATATGACAGTTGTAGATTATCATGATGAGAAGCATGATCAAATGTTTGCTTGCTGTGGCGTTGCACCAGAGGGGTCATTAAGGATTATTCGAAATGGTATTAATGTGGAAAATCTACATAGGACTGCTTCTATATATCAAGGGGTAACTAGTACTTGGACTGTCCGAATGAAAGTTACGGATTTATATCATTCTTTTCTAGTTCTATCATTTGTTGAGGAAACCAGAATATTGTCAGTTGGCTTAAGTTTTACTGATGTGACTGATTCAGTTGGTTTCCAACCGAATGTCTGTACTTTGGCATGTGGCCTTGTGACTGATGGTTTGCTTGTTCAGATCCACCAATCTACGGTTAAGCTTTGTTTGCCCACTAAGGCTGCTCATTCTGAAGGTATCCCTTTGTCCTCTCCTATTTCCACATCTTGGTCTCCAGACAGTGTGAGTATCAGTTTGGGGGCAGTTGGGCATAATTTCATAGTTGTGTCAACCTCTAACCCATGCTTTCTGTTTATCCTTGGGGTTAGATTTCTATCAACTTATCAGTATGAAATTTATGAAATGCAACATTTGGTATTGCAGAATGAATTATCATGCATTTCCATCCCTGGGCAAGAAATTGAGCAAAAACAAGCAAATTCATCTAATAATAGTAGCATCTCTTCTTTTCAAAGTGGAGTGGTCATTAATAAAACTTTTGTTATTGGTACACATAGGCCTTCCGTGGAAATTTGGTTTTTTGCACCAGGTGGAGGAATTACAGTAGTTGCTTATGGGACAATTTCTTTAATGAATACGATAGGGACTGCCATAAGTGGTTGTGTACCTCAAGATGTACGACTTGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCGGAACCATGTCCTTCATCAACAATAAATATGGTGGATACTGCTTTATCTTCTATAAATTTGGTAAATTCTGTGACTAATGCTTTTGACAAGAGAAATGACCTTCCTTCCATGCTTCAATTGATTGCCATTCGACGTATTGGCATTACTCCAGTTTTCTTGGTGCCCCTGGGTGACACACTGGATGCTGATATAATTGCTCTTAGTGATAGGCCCTGGTTGTTGCATAGTGCTAGACACAGCCTTTCCTATACTTCTATCTCATTTCAACCATCCACACATGTAACTCCTGTTTGCTCTGTTGATTGTCCAAAAGGAATATTATTTGTTGCAGAAAACAGTTTACATCTGGTCGAGATGGTCCACAGCAAGAGACTTAATATGCAGAAGTTTCATTTAGAGGGCACTCCAAGGAAGGTCCTCTATCACAATGAAAGTAAGACACTACTTGTGATGAGGACTGAACTGAATTGTGGTACCTGTTTGTCTGACATATCTTGTGTGGATCCCCTGAGTGGGTCAGTACTGTCGTCTTTTAGACTTGAACATGGAGAAACAGGAAAATCAATGGAATTAGTAAGAGTTGGAACTGAGCAAGTTCTTGTTGTAGGAACTAGTCTGTCTTCTGGTCTGCCCACAATGACTAGTGGTGAAGCTGTAAGTTGCAAGGGCCGTCTTCTTGTTCTCTGTCTTGATCATGTGCAAAATTCTGATAGTGGTTCAATGACGTTCTGTTCAAAGGCAGGGTCATCATCTCAAAAAACTTCACCATTCCATGAAATTGTTACATATGCTCCTGAACAGCTATCGAGCAGTAGCCTTGGCAGCAGTCCTGATGATAATAGTTCCGATGGCATTAAACTTGATGAAAATGAAGTATGGCAGTTCCGATTGGCTTATGCAACTAAATGGCAGGGAATGGTACTTCAAATCTGTCCTTATCTTGATCGTTACTTCTTGGCATCTGCTGGCAATGCTTTCTATGTTTGTGGTTTTCCTAATGACAATCCTCAAAGAGTGAGAAGGTATGCCATGGGAAGGACACGTTACATGATAACATCTTTGACTTCACATTTTACTAGAATTGCAGTTGGTGATTGTCGTGATGGTATCCTTATATATTCTTATCATGAGGAAGCAAAGAAATTGGAGCTAGTTTACAATGACCCATCACAAAGGGTAGTTGCTGATTGCATTCTCATGGATGTTGATACGGCTGTTGTTTCAGATCGTAAAGGAAGCATTGCTGTTTTATGTTCAGACCATTTGGAAGAACGAGTTTGGTCCCACTTTGTTTCTGCACTCAAGCTCGTCCTTGTCCTTCGTCATCAACCTCTGTCAATAGCATTGCTTTCACGAAATGGTGGTGCGGAGCAGCCGACAGCAGCTCCTAGACGGCGTGTTGTGTCGCACCTTATTGTTGCAGCCGTCACAACCCTTCATGGAGATTGCAGATCGCGTGTTGCATGGCAGGGCTCATATTCATACAAACTTCCAGCTGATGATGTTTTGCAAGATGGAAATGGCCCCAAGACAAATTTTGATTCATTACAAAATACTATTATTGCCAGTACCCTCTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGGTTGGGCCAATTGAATACT 3987 0.4146 ECSSAKSGPSSSPSTSRYYLSKCVLRGSVVLHVLHAHIRSPSSNDVIFGKETSIELVVIDEDGNVQSVCDQPVFGIIKDLAIIPWNEKFRSRDPQLWGKDLLVATSDSGKLSLLTFCNEMHRFVSLIPGDVSSGHKNSWKASILSFLLSLNSLSVNGTEDLKRGCYALCHRYPPSVHKRNTLNIGRQASPSPGLLTVQNTRIEYPSESESGGTASTSRSIQRTSNIRGTIWSICFISQDSRQPCKEHNPVLAVIINRRGALLNELLLLQWNVKARKIFVISQYVEAGPLAHDIVEVPNSGGLAFLFRAGDILLMDLRDHRNPSCVYKTNLNFLPNAMEEQTYVEDSCKLHDVDDERFSVAACALLELSDYDPMCIDSENSGTNSGYKYVCSWSWEPENNRDPKMIFCVDTGEYFMIEVLFDCEGPKVNLSECLYKGLPCKALLWVEGGYLAALVEMGDGVVLKLEDGRLSYANPIQNIAPILDMTVVDYHDEKHDQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTSTWTVRMKVTDLYHSFLVLSFVEETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHQSTVKLCLPTKAAHSEGIPLSSPISTSWSPDSVSISLGAVGHNFIVVSTSNPCFLFILGVRFLSTYQYEIYEMQHLVLQNELSCISIPGQEIEQKQANSSNNSSISSFQSGVVINKTFVIGTHRPSVEIWFFAPGGGITVVAYGTISLMNTIGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPAEPCPSSTINMVDTALSSINLVNSVTNAFDKRNDLPSMLQLIAIRRIGITPVFLVPLGDTLDADIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSVDCPKGILFVAENSLHLVEMVHSKRLNMQKFHLEGTPRKVLYHNESKTLLVMRTELNCGTCLSDISCVDPLSGSVLSSFRLEHGETGKSMELVRVGTEQVLVVGTSLSSGLPTMTSGEAVSCKGRLLVLCLDHVQNSDSGSMTFCSKAGSSSQKTSPFHEIVTYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGMVLQICPYLDRYFLASAGNAFYVCGFPNDNPQRVRRYAMGRTRYMITSLTSHFTRIAVGDCRDGILIYSYHEEAKKLELVYNDPSQRVVADCILMDVDTAVVSDRKGSIAVLCSDHLEERVWSHFVSALKLVLVLRHQPLSIALLSRNGGAEQPTAAPRRRVVSHLIVAAVTTLHGDCRSRVAWQGSYSYKLPADDVLQDGNGPKTNFDSLQNTIIASTLLGSIMIFIPLSRLGQLNT 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02548 1329 Gene3D - 29 478 IPR015943 GO:0005515
Pste5g02548 1329 FunFam Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 516 910 - -
Pste5g02548 1329 Gene3D - 520 910 IPR015943 GO:0005515
Pste5g02548 1329 Pfam CPSF A subunit region 948 1322 IPR004871 GO:0003676|GO:0005634
Pste5g02548 1329 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 21 1323 - -
Pste5g02548 1329 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 212 683 IPR018846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02548 Pste-Chr5 17916348 17948396 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02548 5 17916348 17948396 Pste5g02548 5 17916348 17948396 ECH