Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02542 ATGCAAAGAGCCCGAAATATGAGACCAAACATCGTTTCTGAGGTAATCTCCGATCCATTACCGTATTTTGTTCGATCCTTGTTTCACAATTTCGAGGCAGGGTTGCCTACTAGGATGAGTCAATGGTGGGAAAGCATTCCATTTCTCACTTCTGCAGTGGTGGTTGTCTGTGGAGTCATTTACTTGTGTCTGGTTGCTCTGCTAAGAATTATTCTCTCCCATGCAGTTTACAGGATTTATACCTCCATTCTTTTCCATGGTTCACTGCTTCATGTTCTCTTCAACATGATGGCTTTAGTTCCCTTGGGCTCTGAGCTGGAGAGGATCATGGGCTCAGTTCGCTTGCTATATGTCATTATTTTGTTGGCTACAAGCAATGCCATATTCCATGTTCTCATAGCACTGCTGGTGGCACACAATCCTTTTCTTACATATGATTTCCTCATGAATCAGTGTGCAATTGGTTTCTCAGGGGTTCTATTTTCAATGATTGTTATCGAGACAAGCTTGAGTGGGGTTCAATCCAGGAGTGTGTTTGGGTTGTTTAATGTGCCTGCCAAGTGGTATGCATTCTTTTTGTTGGTAGTGTTTCAGCTCCTCATGCAAAATGTCTCTCTACTTGGACACCTTTGTGGCATTGTATCTGGGTTTGCATATACATATGGCTTGTTTAATTTCCTCATACCTGGGACGTCTTTTTATTCTTCCATTGAATCCTCCTCCTGGCTGTCATCATGTGTTAGACGTCCAAAATTTATTGTTTGCACTGGTGGAAATCCATCGGGTTATATTCCCACACATACAACCCAAAATTCAACAAGTGGATTACTTTCTGGAAATGTTTGGAGGAACCTATCATCATTGATGCCTCAAAGAGAAGTGTCTATTGAGTCAAATGAGGACAGTAGATTCCCTGGGAGGGGAAGGACCCTTGGTTCTAGTCAAGGTCAAACTGCTTCTCATCTGCATTCAGATTCAAACCTTCAAGCTAGACTTTTGGAGGATAGCAGTCCCACCCCTGGTAATACTCAGCAGTTGTCAGAAGGAAGGCATTCAGTTGATAATGCAGCTACAGCGACTGCTGGGGTTCCGCAGCATCAGGGTGCAGTTATTTCGGAAGAAGGGATTAGAAAACTTGTATCAATGGGCTTTGATAGGACGCAGGTGGAAGTGGCGCTCACAGCTGCTGATGGTGATCTCAATGTGGCAGTCGAAATACTCATGAGCCAGCAGGGTTGAAAAAGAAAAATTCTCTTAGATTCTTAAGAGAAATCTTTGGGGTTTGCATCCTACAACTAACAGTTCGCTTACATCTGATAGCCATGCTAACGCCAATTAGCAGAATTGAACATATATGTAAATGGTACAAGCAATATTAAGGAATGTGATGTTTATTTGAAGAAATAGTAAACATTTTGTTTCGCTTAATTTTAACCCCCTTTCTCTTTTCCCTCCTGATCATGTTTTTACACAATTTTACAGAGAGAATGCCTCTAATAATGCGAGTGAGGGAACAGTACAACTTGTATTCAATTTTTAGATCATTAATTACTGGTACCTCTTGCAGAAAGATACAACATCTGGTGTTGCAACCTAAGGTTTGACTTTGGATTAAAAATAATAAGCTGACGCTAACAAGGATGGATAATGC 1651 0.4131 MQRARNMRPNIVSEVISDPLPYFVRSLFHNFEAGLPTRMSQWWESIPFLTSAVVVVCGVIYLCLVALLRIILSHAVYRIYTSILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVIILLATSNAIFHVLIALLVAHNPFLTYDFLMNQCAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLGHLCGIVSGFAYTYGLFNFLIPGTSFYSSIESSSWLSSCVRRPKFIVCTGGNPSGYIPTHTTQNSTSGLLSGNVWRNLSSLMPQREVSIESNEDSRFPGRGRTLGSSQGQTASHLHSDSNLQARLLEDSSPTPGNTQQLSEGRHSVDNAATATAGVPQHQGAVISEEGIRKLVSMGFDRTQVEVALTAADGDLNVAVEILMSQQG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02542 412 Gene3D - 40 225 IPR035952 -
Pste5g02542 412 Pfam UBA/TS-N domain 373 407 IPR015940 -
Pste5g02542 412 SUPERFAMILY Rhomboid-like 44 226 IPR035952 -
Pste5g02542 412 MobiDBLite consensus disorder prediction 332 351 - -
Pste5g02542 412 Pfam Rhomboid family 73 225 IPR022764 GO:0004252|GO:0016020
Pste5g02542 412 PANTHER DER1-LIKE PROTEIN, DERLIN 39 314 - -
Pste5g02542 412 CDD UBA_At3g58460_like 373 408 - -
Pste5g02542 412 SMART uba_6 372 409 IPR015940 -
Pste5g02542 412 Gene3D - 341 412 - -
Pste5g02542 412 SUPERFAMILY UBA-like 365 411 IPR009060 GO:0005515
Pste5g02542 412 MobiDBLite consensus disorder prediction 308 323 - -
Pste5g02542 412 MobiDBLite consensus disorder prediction 293 323 - -
Pste5g02542 412 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 370 410 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02542 Pste-Chr5 17873880 17881784 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02542 5 17873880 17881784 Pste5g02542 5 17873880 17881784 ECH