Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02527 ATTCAAACACTTCTCCCAGGTATGCTGAGTAAAATTAATCAATATTTTACCAATTTTATCATACCTGTGCCTGTTAATTAATCAATTGGCGTCGAGATTCTTTGAATAGCTAGGTTTCGGAAGTGAGAAAAAGGAGAAATGAAATTTGGGTGTGCGTTCAGAGAGTACCTGCAGGAGGAGAGGGAGTGGTTCGTGGACGAGAAGTGTGCCCACGTTGAATATATAAGGTTGAAGAAAGTTTTGAAGAGTTGCCAGAAAGATACCTCCTCTGATAAAAACCAGTTATGTCAGTGTCAGTCTTGCCCATTATGTGATCAACAGTTCTTCTCCGAGTTGATGAAGGAAGCATCGGATGTAGTAGGATACTTTAGTTCAAGAGTTAAGCATCTTCTTCATCTCCATATTGCAACAGGACTGCAAAGATATGTATTGCGTTTGCGCCAGTGCTTTAAAAATGATAGGCAAGCCCTTAGCCAAGAAGGGAGGATTCTAATTGAGTATATTTCAATGAATGCTATTGCTTTGAGGAAAATACTAAAGAAATATGATAAATGTTTTGGGTTCATTTCATCCTTTTCTATTCCACTTCAGGTACACAGCTCTGTGAATGGTGAGAATTTCAAATCTAGGATGCACGCTGAACATATTGAACTTTTGCACTCACCTTGGCTAATTGAATTGGGTGCTTTTTATCTGAATTCTAGTGGACTAGATGGTTGTGAGCTTGATGGAGTCTATGGTCACTTTTCATGTGATCTAAACATAACTAAAGCTGTGATGACATTGGTTCTTCCCGATTCTATTATGCTTGAGTATGATCTAACCTGTGCAATTTGCCTGGATTTTGTTTTCAACCCATATGCTCTGAGTTGTGGTCATATCTTCTGCAAGTCATGTGCTTGCTCAGCTGCCTCTGTGATGATTTTTCAAGGCCTTAAAGCTGCTACTCCAGAGACAAAGTGTCCTATATGCAGAGAGGTAGGAGTTTATTCTAAGGCTGTGCGTATGCTAGAACTAGATCTGCTTGTTAAAAGAAGGTGCAGAGAATACTGGAACGAGAGGCTAGCTGTCGAACGAGTTGATACGTTGAAGCAAACTAAGGAATTCTGGAATTTACAGTCCACATATGCAATTCGATTACTGTAAGCTTTTATACGTTGGCATCGAAACATCCGAGTAGTACTGTTAACAAATAGAAACCCGTTGACTCATATTTTTTAGGTGAGGTAGGATTTAATTAGTTATTGAAACCTTAGCATGACGACGGAAATAGTAAATGAAATTATGAAAACAAGAACTTTGGAAAGTGACATCCTCAGACTTCACTTTTCGAAGATAAGCAGAATCGGTGATAGTTAAATTTTTTTTTGTC 1372 0.3856 MKFGCAFREYLQEEREWFVDEKCAHVEYIRLKKVLKSCQKDTSSDKNQLCQCQSCPLCDQQFFSELMKEASDVVGYFSSRVKHLLHLHIATGLQRYVLRLRQCFKNDRQALSQEGRILIEYISMNAIALRKILKKYDKCFGFISSFSIPLQVHSSVNGENFKSRMHAEHIELLHSPWLIELGAFYLNSSGLDGCELDGVYGHFSCDLNITKAVMTLVLPDSIMLEYDLTCAICLDFVFNPYALSCGHIFCKSCACSAASVMIFQGLKAATPETKCPICREVGVYSKAVRMLELDLLVKRRCREYWNERLAVERVDTLKQTKEFWNLQSTYAIRLL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02527 335 SMART ring_2 230 278 IPR001841 -
Pste5g02527 335 CDD SPX_BAH1-like 2 158 - -
Pste5g02527 335 ProSitePatterns Zinc finger RING-type signature. 245 254 IPR017907 -
Pste5g02527 335 ProSiteProfiles SPX domain profile. 1 150 IPR004331 -
Pste5g02527 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 331 IPR013083 -
Pste5g02527 335 Pfam zinc-RING finger domain 230 279 IPR001841 -
Pste5g02527 335 CDD RING-HC_BAH1-like 220 293 - -
Pste5g02527 335 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 332 IPR033326 -
Pste5g02527 335 SUPERFAMILY RING/U-box 224 281 - -
Pste5g02527 335 ProSiteProfiles Zinc finger RING-type profile. 230 279 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02527 Pste-Chr5 17761675 17765861 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02527 5 17761675 17765861 Pste5g02527 5 17761675 17765861 ECH