Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02497 ATAGCAGCACAGCAGTTTCCGTGTGGTCCCCATTCCAAAAATCCAGGCTGTCAAAGAATAGTATACAATACTAATGCTAATTCCCAATTGTATTGTATTGTATTTGCTATGACATCTGCCTCAAGCATAAGCATAAGCATAACGCATAAGCATAACGCATAAGCATTGAAACAGACTGAGCAACCATACCCCACTCTCAAGGCATCTTTCTTCTCTTCTCATCTAAGGCCTAAGGCCCAAGGCCCTCACTATCATTTCCCCACCAAAACACAACACAAGACTCTTTTGCTGCTGCTCCAAGAGCGCCATGGATTACTCTTCCATCTATGGTGTCTCAAACCTCCTCACCCTTCTCCTTCTCCTCTTACCACTCCATTCCTACTCTCATAATAACACTTCCACCTCCCCTCAGATCAACTCCAACTCCATCCTCGTCGCTCTTCTCGATTCCCATTACACCGAGCTCGCCGAACTCGTTGAGAAAGCGCTTCTCCTTCAGAACCTTGAAGATGCTGTCACCAACCACAACATCACCATATTCGCACCGCCAAACCAAGCCCTACAACGCCACCTCGACCCCGAATTCAAGCGCTTCCTACTCGAACCTCGCAATCTAAGGTCCCTTCAAACGCTCCTCATGTCTCACATTCTTCCCACCCGAATCGCTTCTCACCACTGGCCCGCCGATCACCTCCGCCACCGCACTCTCTCCGACCACCACCTGCATTTCGCCACCAAATCCTCCGGCCACAAGACCGTCGACTCTGCCGAGATCCTCCGTCAAGATGACGTCGTCCGCCCCGACGGCGTCATCCACGGCATCGAGCGCCTCATCGTTCCCCGATCCGTCCAGGAGGATTTCAATCGCCGCCGCAACCTGGCCGCCATATCTGCCGTGCTCCCGGAGGGCGCGCCGGAGGTGGATCCCCGCACGCACCGGCTGAAGAAGGCGGCTCCCGTGCCGGCCGGCGCGCCTCCGGTGCTCCCAATCTACGACGCGATGGCGCCAGGTCCATCGATCGCTCCGGCGCCGGCGCCGGGACCGGGAGGGGCGAAACACCACTTCAACGGGGAGAGGCAGGTGAAGGACTTCATCCACACGCTCTTGCATTACGGAGGGTACAACGAAATGGCGGATATTCTGGTAAACCTAACGTCTCTGGCGACCGAGATAGGAAGGTTGGTTTCGGAGGGTTATGTTCTAACCATTTTGGCTCCAAACGACGAAGCGATGGCTAAGTTAACGACGGATCAGTTGAGCGAACCGGGGGCACCGGAGCAGATTATGTACTATCACATTATTCCCGAGTACCAGACCGAAGAGAGTATGTACAATGCGGTTAGAAGGTTCGGTAAGGTTCGCTACGATACCCTGCGGTTACCGCATAAGGTTCTGGCCCAGGAGTCTGACGGCTCCGTTAAATTCGGCCATTCCGATTCCTCCGCCTACCTCTTTGATCCTGACATTTACACCGACGGAAGGATCTCCGTCCAGGGACTTGACGGCGTTCTTTTCCCTCCCGAGGAACACCAAGACCAAGACCAAGACCAACACCAACAACTCCCTCGCCGCACCTCTCCCCTTGTCAAGGTCGCCGTTAAACCAAGGAGAGGTTTGGGTTGGGGAACGTGTTTATGTGTATGGCATTGGGTGGCAATGTGGAATAGAATTCGCAGTAACACGTGTGATGCCATTCTTTTTCTAGAGGAGATAAGGTTCTCATTGCAGTGGTATCCTGCTCTGCGTTACAAGAGCCGAGCCAGGAACCTGCCACTTGCCCCTTCCCAAATATCAAAGATGCGGACAAAAAGGGTGGTCTATAATATAGAATTTTCGTTTCTGTTCAGTACATGTGAGATTGATTAA 1867 0.5308 MDYSSIYGVSNLLTLLLLLLPLHSYSHNNTSTSPQINSNSILVALLDSHYTELAELVEKALLLQNLEDAVTNHNITIFAPPNQALQRHLDPEFKRFLLEPRNLRSLQTLLMSHILPTRIASHHWPADHLRHRTLSDHHLHFATKSSGHKTVDSAEILRQDDVVRPDGVIHGIERLIVPRSVQEDFNRRRNLAAISAVLPEGAPEVDPRTHRLKKAAPVPAGAPPVLPIYDAMAPGPSIAPAPAPGPGGAKHHFNGERQVKDFIHTLLHYGGYNEMADILVNLTSLATEIGRLVSEGYVLTILAPNDEAMAKLTTDQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVLAQESDGSVKFGHSDSSAYLFDPDIYTDGRISVQGLDGVLFPPEEHQDQDQDQHQQLPRRTSPLVKVAVKPRRGLGWGTCLCVWHWVAMWNRIRSNTCDAILFLEEIRFSLQWYPALRYKSRARNLPLAPSQISKMRTKRVVYNIEFSFLFSTCEID 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02497 519 Gene3D FAS1 domain 279 405 IPR036378 -
Pste5g02497 519 Gene3D FAS1 domain 41 178 IPR036378 -
Pste5g02497 519 SUPERFAMILY FAS1 domain 38 179 IPR036378 -
Pste5g02497 519 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 6 435 IPR044654 -
Pste5g02497 519 ProSiteProfiles FAS1/BIgH3 domain profile. 259 387 IPR000782 -
Pste5g02497 519 FunFam Fasciclin-like arabinogalactan protein 16 254 405 - -
Pste5g02497 519 ProSiteProfiles FAS1/BIgH3 domain profile. 37 176 IPR000782 -
Pste5g02497 519 SUPERFAMILY FAS1 domain 238 406 IPR036378 -
Pste5g02497 519 SMART fasc_3 300 405 IPR000782 -
Pste5g02497 519 SMART fasc_3 76 179 IPR000782 -
Pste5g02497 519 Pfam Fasciclin domain 283 374 IPR000782 -
Pste5g02497 519 Pfam Fasciclin domain 49 178 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02497 Pste-Chr5 17509513 17511630 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02497 5 17509513 17511630 Pste5g02497 5 17509513 17511630 ECH