LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g02457	ATGTTTAATGGAGAAGATACGTTAGTTATTAGGAGTGGTAGTCTCAATGTTTTGGTAAAGTCCGTGGTGGAAGGCAAAGGCCAAAGAGAAGAGAAGTTGGCTGGTTGCAGAGTGAAGAGTGAAGTGTGTATTGTGGGGTCCCGAATCCCCCAAATTCCAATCGATCCGATCTGCTTGGCATCCATCTTAGTCAGAGAAGAGAAAAGAGGGTATCATATGAATAACGCGATGGATCCAGCGACGACGCTGCTGGGGCAAATGCTATTGGAGGAGATCACTCCCGTGGTCATGATCCTTTCCACTCCTTCCGTCGAAGATGCTTCCCTCAAGAACGGCCTCTCCTTTCTTCACACTCTAACGCCCTTCTGCTCCTTTGACAACATCGATGTGCCTGTTAGGACTGCCAGTGACCAACCCTATCGCCTTCACAAGTTCAAATTGCGCTTGTTCTACGCTTCCGATGTCAGGAGGCCAGATTTGAAGGTTGCTAAAGACCAATTGAAGCAAGTTATCACAGAGGCAGGAGACAAAGAATTTTCTGCCTTTTCTTCCGATGTCCCACAAATTAACCACCAACTTTCCTCCAGTTCTGAATACCAAAATACACCATCTTGGTTTCGGTTTCTCAATAAAGAGCTTGTTCGTGTGGCTTCCTTTTCAGACCATGAAGCTTTTGACCACCCTGTGATATGTCTTCTTGCTGTCTCTTCAAAGGATGAACAGCCTATTAACAAATTTGTTGACCTTTTCAACTCCAATAAGCTTCCTACTCTTTTTAGTGACGGTGCAATGGATCCAAAAATTTCAAGGCGTTATTTGTTAGTGCATGATAATCAAGATGGCCCTATGGACAGAGCAAGTAAAATATTGACAGAAATGAGAAGTACGTTTGGTGCAAGTGACTGTTCGTTGCTTTGTATTAATTCTTCCCTGGATGCTCCAATTAAACATAAAGATAATCCTTGGGCTTCATATATAACTGATTCACCTACTCCTAGTCAAGATGTTGGTTGCTTTCTCAACATTGATGATATCAATGAGATCAAAGATCTAATGCAAGATTTATCATCTAAGCACATCATTCCAAATATGGAGCAAAAAATTCGTGTACTCAATCAGCAGGTTTCTGCAACACGAAAAGGGTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGAAGACGGTGCAGATTCTCTCAATGGTCCTACGTATAACTTTAATTCCATTGAATCCCAGATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGACTAATTTCCACAGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGTGTGCAGGAAATGATGGGACTTACGTACTTCATGTTGGATCAATCAAGAAAGGAAGCAGAGTATTGCATGGAAAATGCTTTTAACACATATTTAAAACTTGGATCACTGGGTCAGCTAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTAAAGGCTCGTGATCAATATAACGAGGCAGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCTTACTGCTACTTGTTGTCCAAGCCTTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCTGGTGAGCAGTACAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAGAGGAACTACTTGGAGTTATATCAATGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAAATCTTGGCCTGTAGTCACCAGTCTAAGACAACACAGCAATTATTCCTGGGTGACTTTCTTCAAATTGTGAAGAAAACGGGACGGATGTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTTCACTCAAGGTCATCTTTGAAGATTACCGAACTTTTGGATCACCTTCAGCTGCTATTACTAGAGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGCTACCATCATTCTCTGCTGCCAAGAGTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAAAAAGCACAGTCAATCAAATGTTTGTGTTGCAGGCGAAGCTGTAAGGGTGAATATTGAATTTAAAAATCCTCTGCAAATCTCAATTCCCATATCTGGTGTTACACTTGTATGCAAGTATTCTGCCAGTACTGATGAAGTTAGATCGGGTACTACAGATGAAAATGAGTCAAGTGTGGAGAAAGATAATGAGGTCGACCACTTCAGGAATATGAGCTCTGACAATTCCGCTTTTATGGTGTCTGAGGTTGATTTCTTACTAGGAGGTGGTGAAACAACCATGATTCAATTATCAGTTACTCCCAGAGCAGAGGGTACTCTTGAAATTCTTGGTGTTAGGTGGAAGCTGTCAGGTACAATAGTTGGCTTTCACAACTTTGAGTTGGGCCAACCTAAGAAGAATATTATAAATGGAAGAAGGAAAACAGAGCACCTGCCAAATGAGAAATTTAAATTTATGGTGATTAAGAGCATTCCCAAGCTTCAGGGTTCTGTTCACCCTTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAACTTGTTTTGGAATTGAGGAATCCGTCAGAGTTTCCTGTCAAGAATCTAAAGATGAAGATAAGTCATCCTAGATTCCTGATAATTGGAAAAGAGGGAAAATTGAAGTCAGATTTTCCTGCATGCCTAAGAAAGAAGACAGATTCAGTACAAAGTGATGTGTATGCTAATCTTAATATCATGTCTGACACAGTCTTTTTGTTTCCAGAGGGCACATCAGTTCAAGGTGAAACACCCTTCTTGTGGCCTCTTTGGTTTAGGGCCGCTGTTCCAGGTGATATATCTCTTTACTTGAGCATATATTATGAGATGGAAGATGTAACAAGTGTCATCAAATATCGTACCCTTCGCTTGCATTACAATGTGCAGGTATTACCATCATTGGATGTCTCATTTCAAATTAGTCCTTCTCGATTAAGATTACAAGAATTTCTTGTTCGATTGGATGTCGTTAACAAGACTAGCTCAGAAAGTTTCCAAGTTTATCAGTTGTCGTCAGTTGGGCACCACTGGGAAATCTCATTACTTCAAGCTCCTGATACTATTTTTCCTTCACAATCATTGATGGCTGGTCAAGCAATATCCTGTTTCTTTACGCTAAAGAAATCAAGGAGATTTTCAACATTGGAGGACAACTTATCTACATTGCCTGTCAGAAATGATGTAGGATTGCTACCCGAAAGCTGTGAAGATTTAGTTTATGATATAAACTGTGCACCTTTGGTCAATTTCCACCATTATGAAAGATTGCAGCAGGAAGTTTCGCATGAGGGTGACTTAAATACTGTTGATTTTGTATTAATCTCTCGGCCATTAAAGAGTAATGCCGATCCTGGTTTATTTGATCCTCCTCATATTATGTCTCATCACGCATGTCAATTCAGCACTGCTAGCACAGGCCCTATTTCATGGCTGGTGGATGGACCCCAAACCTTACATCATGACTTCTCTGCATCATTCTGTGAAATAAGTCTGAAGATGCATATTTACAATTCAGCTGGTGTCACTACTTTTGTACGCATAGACACATTGGATTCTGCCGGTAATGGTGGACATATGAACAGTGTAAATGTGGTTCAATCAGCAACTACTGATAACCAACCAGGGTGGCATGATATCACACCAGCAAATGAAGTCAAAGTCACATCAAATGTTCTGGAAACGCAACCAGGAAAGGCACTTTCATTGGAGAGTGTCTCCTCATATATTTGGTCTGGAGCAAGCTCAACCCATCTTTACATTGAGGCCATGTCCTCGGCAGAAATTCCTCTTCAGATCTGTGTATTTTCTCCAGGGACATATGACCTGTCAAATTATGTTTTGAATTGGAAACTTCCATCCGATGGTAACGGTGACAGTGAAACAAGGCAGCATTCAGGCAAGTGCCAGGGCTATAAATACTATCTTACCGTGCTCCAGTCCACTAGAGAAGTTAGTAAATGATTTGCTGTCCGTTTATCCCGTGCTAGAATTTTAGATGTGATTTGTAACCGGGGACTGTATATAATATATACGTTTCCATGTGTTGTTAAAATGTCATTAGGAATTAGGAACAACAGAAAAAGTGGTAGAACTGGAGTTCTTTTGTCCAAACAAATAATGACAGTGGCAGTACACTGTACACGATTCGGGGAATAGGCTATAGGGTATTTGGACTGGCCAAGTTTGAGAAAGGAAGTTGTATGATAGTATTTTTGCGGAGACAATGAAGTTATAAGGAATTATTTTTATGAAGACAATCTTAACAATTTTTTGTATGCCCAACGGTTAACTAGGGATGGAATGAAAGAAAAGCACAGGTAACAGAATCAGAGTCTTCCACCCATAGCCCGTGCAGCGCAAGAATAGGTTACGCACACCAAATGTTTTGAGCTTACTTCATGGAGCATCGGAGAACAATTGTTCTAATTTTTCTGTGTCACCCAAAGCAGTTTTCAAAGGCTAAGTTTTCTGACTCCTGCCAAGTTGTAAGACAGGGAAGTTTTACTATACTGTAAAAAGTTATTTTAAAATTAATGGTATC	4696	0.4014	MFNGEDTLVIRSGSLNVLVKSVVEGKGQREEKLAGCRVKSEVCIVGSRIPQIPIDPICLASILVREEKRGYHMNNAMDPATTLLGQMLLEEITPVVMILSTPSVEDASLKNGLSFLHTLTPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDVRRPDLKVAKDQLKQVITEAGDKEFSAFSSDVPQINHQLSSSSEYQNTPSWFRFLNKELVRVASFSDHEAFDHPVICLLAVSSKDEQPINKFVDLFNSNKLPTLFSDGAMDPKISRRYLLVHDNQDGPMDRASKILTEMRSTFGASDCSLLCINSSLDAPIKHKDNPWASYITDSPTPSQDVGCFLNIDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKEDGADSLNGPTYNFNSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFNTYLKLGSLGQLNATRCGLWWIEMLKARDQYNEAATVYFRICGEDILHSAVMLEQASYCYLLSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVFRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMMEILACSHQSKTTQQLFLGDFLQIVKKTGRMFEVTKLQLPVINISSLKVIFEDYRTFGSPSAAITREGLWRSLEEEMLPSFSAAKSNWLELQSKLISKKHSQSNVCVAGEAVRVNIEFKNPLQISIPISGVTLVCKYSASTDEVRSGTTDENESSVEKDNEVDHFRNMSSDNSAFMVSEVDFLLGGGETTMIQLSVTPRAEGTLEILGVRWKLSGTIVGFHNFELGQPKKNIINGRRKTEHLPNEKFKFMVIKSIPKLQGSVHPLPGKAYAGDLRQLVLELRNPSEFPVKNLKMKISHPRFLIIGKEGKLKSDFPACLRKKTDSVQSDVYANLNIMSDTVFLFPEGTSVQGETPFLWPLWFRAAVPGDISLYLSIYYEMEDVTSVIKYRTLRLHYNVQVLPSLDVSFQISPSRLRLQEFLVRLDVVNKTSSESFQVYQLSSVGHHWEISLLQAPDTIFPSQSLMAGQAISCFFTLKKSRRFSTLEDNLSTLPVRNDVGLLPESCEDLVYDINCAPLVNFHHYERLQQEVSHEGDLNTVDFVLISRPLKSNADPGLFDPPHIMSHHACQFSTASTGPISWLVDGPQTLHHDFSASFCEISLKMHIYNSAGVTTFVRIDTLDSAGNGGHMNSVNVVQSATTDNQPGWHDITPANEVKVTSNVLETQPGKALSLESVSSYIWSGASSTHLYIEAMSSAEIPLQICVFSPGTYDLSNYVLNWKLPSDGNGDSETRQHSGKCQGYKYYLTVLQSTREVSK	1371

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g02457	1371	Gene3D	Tetratricopeptide repeat domain	406	632	IPR011990	GO:0005515
	Pste5g02457	1371	Pfam	ER-Golgi trafficking TRAPP I complex 85 kDa subunit	241	596	IPR024420	-
	Pste5g02457	1371	SUPERFAMILY	TPR-like	507	633	IPR011990	GO:0005515
	Pste5g02457	1371	PANTHER	TRANSPORT PROTEIN TRAPP	80	1365	IPR024420	-
	Pste5g02457	1371	Pfam	Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit	715	910	IPR013935	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g02457	Pste-Chr5	17127653	17154005	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste5g02457	5	17127653	17154005	Pste5g02457	5	17127653	17154005	ECH