Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02393 AAACTGGCAAGGAGAGACTTGTGTACATCCATTGGAGAGATGTATTTTGAGAATCTAGAAACTTGACGGAGAGAGAAATAGTGTGAATAGGAAGGACGTGCACGAAACTTTACTAACGCAGCAACATTGGAGGCGAAGCCAGCAATGGGCAACGCTCAGTCACCTCCCACGGATAATCCTCGATATGTTTCTGCAACCAGAGCTTTTACTCATAAGGAACTTGAAGACCTGAGGTCTCTTTTCAATAATCTCGCAGCTCAATCCCAGACCAATAACAAATACATCTCTTCCTCCATCTTTCAGTCGTATTTTGGACTTCATGGCCCTCTTGGTGAGAGGATGTTTGACTTGGTTACACAAGAGCGCAAGGACCAGAGGTTAACCTATGAAGACCTCGTTCTTGCTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTCATCTTTCGCTTATTAGATGTATCTGGAGATAATTTTGTAGGGAGGTCTGATTTGGAAACTGTTATCATTGCCATTTTTAACGATATATTATGCATAAAAGGTTCTGAGGATAAATCAAGTTCACAGCAGGATGTTGTCGACATATTTCTGAATGCTGCAAACTTCTCCATGCATAATGAAGGCGGCACTCAGAAGACTATGTCTTTTGAAGATTTCAAGAGCTGGTGTACTCATCTTCCATCTATGAAGAAGCTTCTTGGAAGCCTGCTTTTGCCACCTGATTCCGGACGACCTGGTTCTCAGATTCCTAAACTATTGACTTCGAAGGCTATTGATTCTAACATTTTGCTTTTGAGAAAGGAATACGCGTGGCATATTGGAGGCGCACTTTCTTATCAAGACCTGGAAGATTGGAACCTTTTGTATCATAGTTCTGTTAATGGTCTTAGTTTTAATACATTCTTTGGCTGCATTTCAAATCATGCAGGCCCAACTGTGTTAATTATCAAGGATAAAGAAGGTTATATATATGGAGGGTATGCTTCTCAACCATGGGAGCGGCATGCTGATTTTTACGGAGACATGAAGTGTTACCTTTTTCAACTAAATCCAGTGGCATCTATATTCAGGCCGACTGGAGCAAACAATAATCTACAATGGTTTGCTATCAACTTCAGTTCAGAGGACATTCCAAATGGGATTGGTTTTGGGGGACGAGTGAATCACATGGGTTTGTTTCTAACAGCAAACTTTGATCAAGGACATACATTTTCATGTTCTACATTTGGTAGTCCTTGCCTCTCAAAGACTAACCGTATACTGCCTGAAGTAATAGAGTGTTGGGGAGTCAATCAAGATGCAACACAAAACAAGAATGATGCGGTCAAGGGCACTATTCTGGAGAGGTTCAAGGAAGATCGCAATATGCTCAAAATGGTTGGGCTTGCAAATTCCAGTGAGTAAAGTATTGCCCTTTTAATCACTATTCATATGCTACGAGAATAACAACTCTTTATGCTGCTATCATCTTTGTTAACCAGTATATATTGTGAATCTCTATCTTTTTTTTTCTTAATTATTTTTGGTACCTTGAGAATAATTGAATCTACATTGGCGCTGTACCCACAGTTGATACCTCTCAATCATTTGCCTTGAAAATTTGTTCACCCTCTTTATTCTAATTAAAGATTTGTGCAAGTAACAATTTCTGAC 1662 0.3947 MGNAQSPPTDNPRYVSATRAFTHKELEDLRSLFNNLAAQSQTNNKYISSSIFQSYFGLHGPLGERMFDLVTQERKDQRLTYEDLVLAKATYEKGTKDEIEEFIFRLLDVSGDNFVGRSDLETVIIAIFNDILCIKGSEDKSSSQQDVVDIFLNAANFSMHNEGGTQKTMSFEDFKSWCTHLPSMKKLLGSLLLPPDSGRPGSQIPKLLTSKAIDSNILLLRKEYAWHIGGALSYQDLEDWNLLYHSSVNGLSFNTFFGCISNHAGPTVLIIKDKEGYIYGGYASQPWERHADFYGDMKCYLFQLNPVASIFRPTGANNNLQWFAINFSSEDIPNGIGFGGRVNHMGLFLTANFDQGHTFSCSTFGSPCLSKTNRILPEVIECWGVNQDATQNKNDAVKGTILERFKEDRNMLKMVGLANSSE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02393 422 SMART 109ultra 217 386 IPR006571 -
Pste5g02393 422 Gene3D - 4 190 - -
Pste5g02393 422 ProSiteProfiles EF-hand calcium-binding domain profile. 95 130 IPR002048 GO:0005509
Pste5g02393 422 Pfam TLD 242 385 IPR006571 -
Pste5g02393 422 ProSitePatterns EF-hand calcium-binding domain. 108 120 IPR018247 -
Pste5g02393 422 ProSiteProfiles TLDc domain profile. 218 386 IPR006571 -
Pste5g02393 422 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 28 385 - -
Pste5g02393 422 SUPERFAMILY EF-hand 7 191 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02393 103 421 EF-hand Containing Proteins AT5G06260 59.317 1.41e-145 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02393 5 16390244 16394902 Pste5g02393 5 16390244 16394902 ECH