Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02340 ATGGTTCTCCCTAAGTCTCTCACCATCTCTTTGGTGTTTTTCTCTGTTTTCGTGTTACTCATCAACAATGGCGTTGAAGCTTTCCATAAAAAATTTCCTCATCTTCAATCTATTTCAGTTCTTTCTGTGACCGCAGTGCACAGAACTGGATACCATTTTCAGCCTCCTAAACACTGGATCAACGGTATGTATAATACTGTTTTTAACCGGCCAATGTATTATAATGGATATTACCATCTATTCTACCAATACAACCCGAAAGGGTCAGTGTGGGGTAACATTGTGTGGGCACACTCGGTGTCAAAGGATATGATAAATTGGGAGGGGCTGGAACATGCCCTTTACCCATCGAAGCCCTTTGACAAATTTGGATGTTGGTCCGGGTCGGCGACGGTAGTCCCGGGTAAGGGACCGATAATCCTGTACACTGGAATAGTGGACGAAAAACAAAGTCAAGTGCAATGCTACGCTGTACCGGAAGACCCGAAGGACCCACTACTTAGAAAATGGGTAAAACCGGACAAAATGAACCCCATATTGATAGCAGACAAAGGTGTAAACGGCAGTGCGTTTCGTGATCCTACAACAGCTTGGTGGAGTAAAGATGGACATTGGAGGATTTTGGTGGGCAGCAGAAGGAAGCGTAGAGGGATGGCGTATTTGTATCGGAGTAAGGACTTCATGAATTGGGTTCTGGCCAAACACCCCATCCATTCCAAGGCAGGCACAGGCATGTGGGAGTGTCCTGATTTTTTCCCTGTTCCTGTTAACGGCAGTCACGGGTTGGATCTTGATCGTGATCATGATCGTGATCATGTCAAGTACGTCCTCAAAAATAGCCTTGACATGACCAGGTTCGACTACTATACTTTGGGAACCTACTTTCAGAATAAGGATAGGTATGTCCCCGACAACACTTCCGAGGATGGTTGGGGTGGTCTTAGGTATGACTATGGTAATTTCTATGCTTCCAAGTCTTTTTTTGACCCCTCCAAGAATCGAAGGATCTTATGGGGTTGGGCAAACGAGTCTGATACCAAGGAAGACGATGTCCGCAAAGGATGGGCAGGAATTCAGGCAATTCCACGAACCGTGTGGCTAGATTCTACCGGGAAACAGCTACTGCTTTGGCCTCTTGAAGAATTAAATAGTCTTAGAGGCGAAGAAGTTAGCCTCAACAATCAAAAGCTTAACACGGGAGATCATATTGAAGTCAAAGGAATCACTGCTGCCCAGGCAGATGTGGAAGTTTCCTTTTCATTTTCAAGTTTGGACAAGGCAGAGGCATATGATCCTAACTGGGTAAACGCTCAGGAACTTTGTGCCCACAAGGGTTCAGAACTTCAAGGTGGGATTGGACCATTTGGGCTTCTCACTTTAGCTTCTCAAAATTTGGAGGAATTTACTCCTGTGTTTTTTAGAATTTTCAAAGGTCCAAATAAGCATGTGGTTCTATTATGCTCGGATGCAAAAAGTTCCTCTATAAACAGTCATTTGTACAAGCCATCATTTGCTGGTTTTGTAGACGTGGATTTGGCAAATAATAAAAAACTTTCTCTTAGAAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGAGAAGGTGGGAAGACAAACATTTTATCACGGGTTTATCCAACACTAGCAGTGACGAATCAAGCTCACTTATTTGTATTCAACAACGGTACAGAACCAATCACCGTGGAAAACCTCAAAGCTTGGAGCATGAACTCTGCTGATATAAAATGAATCAAAAGAAACTGCTGCAGCACGTTAGAGTTGATATCCTGGAAGTTACAACAGCTTTAACAAAATTTGCAAAGCCGCGACTGACTACTTTCCAAAAGTTGCGACTGTTACTGTCAACAAAATTTGCAAAGCCGCATCTTCATTACTTTCCAAAAGTTGCGGACGGTTATCTTTTATTAAAACTGAATTATTATATTATAATAACTAGAG 1959 0.4283 MVLPKSLTISLVFFSVFVLLINNGVEAFHKKFPHLQSISVLSVTAVHRTGYHFQPPKHWINGMYNTVFNRPMYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDMINWEGLEHALYPSKPFDKFGCWSGSATVVPGKGPIILYTGIVDEKQSQVQCYAVPEDPKDPLLRKWVKPDKMNPILIADKGVNGSAFRDPTTAWWSKDGHWRILVGSRRKRRGMAYLYRSKDFMNWVLAKHPIHSKAGTGMWECPDFFPVPVNGSHGLDLDRDHDRDHVKYVLKNSLDMTRFDYYTLGTYFQNKDRYVPDNTSEDGWGGLRYDYGNFYASKSFFDPSKNRRILWGWANESDTKEDDVRKGWAGIQAIPRTVWLDSTGKQLLLWPLEELNSLRGEEVSLNNQKLNTGDHIEVKGITAAQADVEVSFSFSSLDKAEAYDPNWVNAQELCAHKGSELQGGIGPFGLLTLASQNLEEFTPVFFRIFKGPNKHVVLLCSDAKSSSINSHLYKPSFAGFVDVDLANNKKLSLRSLIDHSVVESFGEGGKTNILSRVYPTLAVTNQAHLFVFNNGTEPITVENLKAWSMNSADIK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02340 582 Gene3D Glycosyl hydrolase domain; family 43 58 391 IPR023296 -
Pste5g02340 582 Pfam Glycosyl hydrolases family 32 N-terminal domain 52 378 IPR013148 -
Pste5g02340 582 SMART glyco_32 52 536 IPR001362 GO:0004553|GO:0005975
Pste5g02340 582 SUPERFAMILY Arabinanase/levansucrase/invertase 44 378 IPR023296 -
Pste5g02340 582 Gene3D - 392 576 - -
Pste5g02340 582 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 20 580 - -
Pste5g02340 582 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 390 576 - -
Pste5g02340 582 SUPERFAMILY Concanavalin A-like lectins/glucanases 378 579 IPR013320 -
Pste5g02340 582 CDD GH32_Fruct1-like 58 367 - -
Pste5g02340 582 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 56 390 - -
Pste5g02340 582 Pfam Glycosyl hydrolases family 32 C terminal 381 575 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02340 Pste-Chr5 15886327 15891826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02340 24 577 Glycoside Hydrolase AT2G36190 63.781 0.0 729
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02340 5 15886327 15891826 Pste5g02340 5 15886327 15891826 ECH