Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02320 TTTCATTCTCTCTGAAACGCAACTTCAATAGCCAATTGGCTTCCCAGAATGTCGGGGAAGAGAAAGAGGAAGTTGAAATTGTTAAGCGACACAATCACAGATAATAGAAGAACAGTTGCTGAGGTGAAAAGTGAAAATTTGGAGCTGCAATCCTGGGCCGATCTCCCTTCTGAACTCTTAGAGTTGATCTTGTCCCGATTGATCCTAGCAGATAACATCCGTGCTTCTGCTGTTTGCAAGAGATGGCATTCTGTTGCCACTGATGTTCGTGTAGTAAACCAATCACCATGGCTTATGTATTTTCCAAAATTTGGTGACTGTTATGAATTTTATGACCCTGTGCAGCGTAAGACCTACACCCTCGAGTTGCCAGAGTTGAATGGATCCAGAGTTTGTTATACAAAAGATGGTTGGTTATTGCTTTACCGGCCCAGAACTCTGCGAGTATTCTTCTTTAATCCCTTTACTCGGGAGCTGATCAAACTTCCAAGATTTGAGATGACATACCAGATTGTTGCCTTCTCTTGTGCTCCAACATCACCTGGTTGTGTTTTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGTTATCCTGGGGCAACAGAATGGACCACTGTTAATTACCAAAATCGCTTGCCCTTTGTCAGCAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGTTGTTTTATTGTCTGAGCCTCACAGGTTGGCTTGGGGTGTTTGACCCAGTTGAATGTACTTGGAGTGTTCTGGCAGTACCTCCCCCCAAATGCCCAGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGAAAATTCATGACAGAGCGTGAAGGAGATATATTAGTAATTTATACATGCTGTAGTGAAAACCCGATTATTTTTAAGTTAGATCAGACACTAATGAAATGGGAAGAGATGACAACACTAGATGGAGTAACTCTTTTTGCTAGTTTTTTGTCATCTCATTCAAGGACTGACCTCATTGGAATAATGAGGAATAGTGTCTACTTCTCCAAAGTCCGCTTCTATGGAAAGCGTTGCATATCATTCTCTCTTGATGACTGTAGATACTATCCCCGTAAACAATGTCATGACTGGGGAGAACAAGACCCTTTTGAGAACATCTGGATTGAGCCACCAAAGGACTTTTCTGCTTGCATGTGAAGAATTTTAGTGAAACAACATTTTTTATTCAATGTCAAGTCCTAATGCAGAACATGTGAATATTTGGAAGCATTGCTATGTTTGCAGTTTGCATAAAAAAGAAGTTATATTAGAAGGAAAGGATCTCTGTAAGAGGGAAGCGAAAAGACTTGCCTCCTTGGTTATTTATTGTCTCTGCAGATCCTGGAGCATTAAGATTTTTTGCCCAGAACGGCAGAGGACATTAGAGTTTATCCTAATCTAGAGATTTAGCAGTTATTATTTTGGGCAAGATCCATAGTTTATTGTATGTAGGAATGGACAGCTGTAAGAGGGAAGAAAAAGACTTGGCATCTAGGTCATTTTGTCTCTGCAGATCCTGAAGTATTAAGATTTTTTGCCCCAAGACAGCAGTGGCTATGTAGAACATTAGGGTTTATACTACTAATAAAGAGCTTTATTGATTAGTATCTCGGACATAACCTCGTAGTTTATTGTAACTTTTGCCATTAATCTTTGCGTTTAATTGATCTACTGATTCAATTGCAG 1707 0.3978 MSGKRKRKLKLLSDTITDNRRTVAEVKSENLELQSWADLPSELLELILSRLILADNIRASAVCKRWHSVATDVRVVNQSPWLMYFPKFGDCYEFYDPVQRKTYTLELPELNGSRVCYTKDGWLLLYRPRTLRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECTWSVLAVPPPKCPENFFAKNWWKGKFMTEREGDILVIYTCCSENPIIFKLDQTLMKWEEMTTLDGVTLFASFLSSHSRTDLIGIMRNSVYFSKVRFYGKRCISFSLDDCRYYPRKQCHDWGEQDPFENIWIEPPKDFSACM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02320 376 Pfam F-box-like 36 72 IPR001810 GO:0005515
Pste5g02320 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
Pste5g02320 376 PANTHER OS09G0392200 PROTEIN 24 370 IPR044619 -
Pste5g02320 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Pste5g02320 376 Gene3D - 35 75 - -
Pste5g02320 376 SUPERFAMILY F-box domain 31 128 IPR036047 GO:0005515
Pste5g02320 376 CDD F-box_SF 37 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02320 Pste-Chr5 15739914 15743659 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02320 5 15739914 15743659 Pste5g02320 5 15739914 15743659 ECH