Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02236 CAATATCTGAGACGCTCGGCCATAGCCAGACATTTCATATCCAAGCAGGGCCTTATTATTATTTGTTTGGAAGGGACAATGGACGATCAGAATTAAAGAACTGAGCCCAGTGGGCCCCATAACTCCCGTGTCCATGGTATTTGGACTGTGAACACTCACACCTAGCAGCATCACTCGCACTCTCATTGTCATCTCCACCCAGATAGCGCCACCCTTCACCGTACAATTTCCTTTTCTTTTAGTATTATGTTTATATTCAATATTAATTAATTGCTTAGATAATTTAATATTTGTATATAATTACCGTAGTATTACTTGTTCTAATCATGTGCCGCTTCTCTCGGCTTCTCGAACTTAACACACTCTGGATCTGTTCTTCTGCTTCTGAAACAACATTCTCTTCTCTCTGAATCTCAATATCTCCCAGACTAACCCTAAGCGCTGAGAAAGATGGTTTACACTATCTCTGGAATTCGATTTTCGATACTTCCTTCGCTCCACAACTCCACCTTCCGTAGCGATCACAGAACTGCTTCTCTTCCCGTATTTCTCAGAAAGAACTCCTTTTCTCGGAAAATCCTTGCTGTAAAATCTTCCCATGATTCTGATTCCCTGTCTTCTGCAATTGCCGAAGATAAAAACTTCGAAGATTTAACAATGGAAGATGAGGATAAATACAGCATTAGTGAAGCAGCTGGTAGTTATCAACAGATTGAAGATGGGCAAGGTTCTGTTGCAACATCACTTGTAGATGTAAACATTCCAGCCAAGAAGACATCAATATCTGTTGGCAGGAAAGGAAAGATAGTAAGTGATGAAGCTAAACCTAGGATCATTCCCCCACCTGGTGCTGGGCAGAAAATATATGAGATTGATCCATCTTTGTTGCCCCACCGTGGGCATCTTGATTTCCGTTATGGACAATACAAAAGATTGCGTGATGAAATTGACAAGTATGAAGGTGGTCTGGATACATTTTCTCGTAGTTATGAAAATTTTGGCTTCACACGCAGAGGTGGCCAGAAGGAAGGCAGCATTTGGTTTCCGACTTCCAATCTCATGAGAAATACTGGTTGGACAGATTCCAGTGACGAGCACATGGCAGCATGTACTCCAATGGCAGCAAGCTTCCAGCAAGAGGCCAGATTGAGGATGGTGAACAAGGTGGTGGGATTGCTTGGTGAGAAACATACTTCAGATCTTCAAAACAAAGATTTCAGCCTTGAGAAAAGAGAAAAAGTGATGATTCATGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCAGCAGCATTAATTGGAGACTTCAACAATTGGAATCCTAATGCAGATGTAATGACCAAGTACTCTATTACTTTCCAGTTGTATGTGGATGATGTTGAACTGGCAGAGAATGAGTTTGGTGTGTGGGAGATCTTCTTGCCAAACAATGTGGATGGTTCACCACCAATTCCTCATGGTTCTCGGGTCAAGATCCGCATGGATACTCCCTCTGGAATCAAGGACTCAATTCCTGCTTGGATCAAGTTCTCGGTACAGGCTCCTGGTGAAATTCCTTATAGCGGCATATACTATGATCCCCCAGAAGAGGAGAAATATGTCTTTAAACATCCACGGCCTGAGAGACCAAAATCACTTCGAATATATGAGTCACACATCGGAATGAGTAGTCCGGAGCCAAAAATCAACACATATGTCAATTTTAGAGATGATGTACTACCTCGTATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACACTCTTATTATGCCAGCTTTGGTTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGATTTGGAACTCCAGAGGAACTCAAGTCTCTAATAGACAGAGCCCATGAACTGGGTCTGCTTGTTCTGATGGATATTGTGCACAGCCATGCATCAAATAATACATTGGATGGACTGAACATGTTTGATGGAACTGATAGTCATTACTTCTATCCTGGATCACGAGGATATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTACTTAGGTTTCTACTTTCAAATGCAAGATGGTGGTTGGATGAATACAAGTTTGATGGATTTCGATTTGATGGTGTAACATCAATGATGTACACTCATCATGGATTGCAGGTAGCATTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTAGATGCGGTGGTTTACCTGATGCTGGCTAATGATGTCATTCATGGGCTCTTCCCCGAGGCTGTTACAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGATTATCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGTCAGATGAAGACTGGAAAATGGGTGATATTGTCCACACACTTACAAACCGAAGGTGGCAGGAAAAATGTGTAGCTTATGCTGAAAGTCATGACCAGGCCTTGGTTGGTGATAAGACAATTGCATTTTGGCTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCGTCTACTCCTCTGATAGATCGAGGTATAGCATTACACAAAATGATTAGGCTTATTACCATGGGCCTTGGTGGAGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGAGCAGCATCTTCCTAATGGTGTAGTAGTTCCTGGGAATAACAATAGTTTTGATAAATGCAGGCGTAGATTTGACTTGGGGGATGCAGACTATCTAAGATATCGAGGGATGCAAGAATTTGATCAAGCCATGCAGCATGTAGAAGAAAAGTTTGGTTTCATGACTGCTGAGCACCAATATATTTCACGGAAAAATGAAGGTGACAGAATTATAGTCTTCGAAAGGGGCAACCTTGTCTTTGTCTTTAATTTTCATTGGACCAACAGCTATTCAGATTACAGAGTTGGCTGCTTAACCCCTGGGAAATATAAGATTGTCTTGGATTCAGATGATGCCTTGTTTGGCGGCTTCAGTAGGCTCAACCACGCTGCTGAGTACTTCACCTCTGAAGGATGGTTTGATGACCGACCTCGATCCTTTCTTATATATGCACCTTCTAGAACAGCAGTGGTTTATGCCCTTGAAGATGAAGTTGAATCAGAGGCAGTTGATCCTTGATGGCAAGTTTCTGGGATGAAGGTTACATGTGCACAATGGCATGGAGGCAATAAATCCGTAGTCAAATTAGCCAACCAACGTCCGGTGGTTTAACCGACGCCGAAACAACAAAGAAGCAGAATTGATGTGGAATAAGTGGAATGATGGCGTTAATCTTTAGTGAGGCAGGTGACTAGCCTCGAAATCTTACAAGTGCTTTGCTTGGTAATAAGTTATTATATCACACCAAGCTTTTTCTGTTTTTACTTTTTATGATTTTATCGCTTGACCTGTATAAATTGCATTGCGATTGAGAAATGTGAATCAACAAAGCTATGCTCCGCCGATCTGAGATTAATGTACCTTTGCACATATCAATCTTCATAAAGTGCATACTCTGTTTAAGAGTTGGAGGTTTCCAAAGGGCCTTTACCATGGGAAGTTTTCCAAGAGGCTTTTATAGATGTTTCCATTAGATTATTTTTGTAAGAGTTTATGAATGTAATTGTATGTTCATAGCACATATGAAACTTTTATCTATAATGAGTGATAGGTACAATAAAAGGGAAACAAAATAAATGTAAATAATAACTAATATAATGTAATCAAATCATATCTTAAT 3814 0.4103 MVYTISGIRFSILPSLHNSTFRSDHRTASLPVFLRKNSFSRKILAVKSSHDSDSLSSAIAEDKNFEDLTMEDEDKYSISEAAGSYQQIEDGQGSVATSLVDVNIPAKKTSISVGRKGKIVSDEAKPRIIPPPGAGQKIYEIDPSLLPHRGHLDFRYGQYKRLRDEIDKYEGGLDTFSRSYENFGFTRRGGQKEGSIWFPTSNLMRNTGWTDSSDEHMAACTPMAASFQQEARLRMVNKVVGLLGEKHTSDLQNKDFSLEKREKVMIHATGITYREWAPGAKSAALIGDFNNWNPNADVMTKYSITFQLYVDDVELAENEFGVWEIFLPNNVDGSPPIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPYSGIYYDPPEEEKYVFKHPRPERPKSLRIYESHIGMSSPEPKINTYVNFRDDVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEELKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDSHYFYPGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVAFTGNYNEYFGFATDVDAVVYLMLANDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKSDEDWKMGDIVHTLTNRRWQEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGEQHLPNGVVVPGNNNSFDKCRRRFDLGDADYLRYRGMQEFDQAMQHVEEKFGFMTAEHQYISRKNEGDRIIVFERGNLVFVFNFHWTNSYSDYRVGCLTPGKYKIVLDSDDALFGGFSRLNHAAEYFTSEGWFDDRPRSFLIYAPSRTAVVYALEDEVESEAVDP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02236 920 Gene3D Immunoglobulins 265 385 IPR013783 -
Pste5g02236 920 SUPERFAMILY Glycosyl hydrolase domain 812 911 - -
Pste5g02236 920 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 109 911 - -
Pste5g02236 920 SUPERFAMILY (Trans)glycosidases 401 786 IPR017853 -
Pste5g02236 920 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 259 385 - -
Pste5g02236 920 CDD AmyAc_bac_euk_BE 382 797 - -
Pste5g02236 920 Gene3D Glycosidases 386 806 - -
Pste5g02236 920 Gene3D - 811 918 IPR013780 -
Pste5g02236 920 SMART aamy 416 776 IPR006047 GO:0005975
Pste5g02236 920 Pfam Alpha amylase, C-terminal all-beta domain 815 909 IPR006048 GO:0003824|GO:0005975|GO:0043169
Pste5g02236 920 CDD E_set_GBE_euk_N 269 378 - -
Pste5g02236 920 SUPERFAMILY E set domains 269 380 IPR014756 -
Pste5g02236 920 Pfam Alpha amylase, catalytic domain 426 498 IPR006047 GO:0005975
Pste5g02236 920 FunFam 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic 811 911 - -
Pste5g02236 920 FunFam 1,4-alpha-glucan branching enzyme 380 806 - -
Pste5g02236 920 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 269 310 IPR004193 GO:0004553|GO:0005975
Pste5g02236 920 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 313 360 IPR004193 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02236 Pste-Chr5 14970146 14993624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02236 269 911 Glycoside Hydrolase AT5G03650 83.826 0.0 1165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02236 5 14970146 14993624 Pste5g02236 5 14970146 14993624 ECH