Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02155 GAAAAAGAGAGCGCAAGAAGTTGATGTCTGATGATGCGAAGGGGAAGCAAATGGAATTGAGCCTCGGTTGGTGATTTCCATGGACGCACCTCGGAAACAGCAGGTATCGTTGAGGGGAGCAAGTGCGAAGGAGATTACGAGAGACGCTCTTCTTCAGCAGGTCTCTCGAGAAAGAGAACTTCGCAATTATGCTAAAAGAGCTGCTGCTGCTGCTCTCTTCATTCAGAGAGTATGGAAGCGCTTCAAGGTCACAAAGATGGTTTCTCTGCAACTTCAGCAGGAGTGGGAGATGGTGGTGAATCACTATATTGGTGTGATGACAGCAAATTGGATTTCAAACAATTTATTGAGACCATTTCTGTTCTTTATCAGCCGTATGTCAACCCAGCATCAGAACATCCACAGCAAGAGAATAGATTCTATGAAGCGGTGCTTTACCATCCTACTGGAAAGCCTGAAATCTTCTGATTCAAAGTTGAACTTTTGCTTTTTGGCAATTGGTACAACTGAAGAAAGAAGAATATGGAGATACCAGGCACGGCAGCTGACTTCTCTTAGTTTTCTAATTCTTTCAGAGTTTAGTGAAGGCAATTCAGGGGCTCAAGATATTGCTATTGTTGCATCTCTAGCTATGCGTGTTCTTGTAATGTTAACTGATCAGAAAGGATGGAAAGGCATTACAGATGACAACCACTTAGATGCAGATTTAGCAGTGAAAGATTTAATTCAGTTCATGGGGGGTAATAAAAGTGGTTGTTATGTTTCTATTGGCAGATATATTAGTGCATTAGAAAATCATTCTTCTCAGTCAAAGACTATCACCCAGGCAGATGAAAAATTTTTCATTACTGCAAGTGCAATAACTTTAGCTGTTCGTCCATTTTATCTGACAAACAATGATGTGGAAGTGCCTGTTACACTGGATGTCAACCATGCTGCGAAGCAGTATATTGTTTATCTGCTGACTATACCTTGGCTAGGGCAACATCTCCCACCTGTTCTTCTACCTGCTTTAAAGCACAAATCTATTTTGTTTCCATGCTTCCAGACTCTATTGATTTTGAAAGAGAAAGTTTTGTTGGAGATGTCAGAGTTCGTTAAATCAGAAGTTGTTGTCTCTTTCAAGGCTATTCCAGCAGTTGGTTGGGCCCTCACTAACAGTATATGCCTAGCTACAGGGAGTGAGAATGAGTCCTTCAATCAAGGTTTAGACTATGCATTATACGTCCATGTTGTTATTACTCTAGCAGAGGGTCTACTGGCTTGTCTGGATAATATTGGATGGGTCAAAAAGAAAAAGAAAGCCCTTCAAAATGATGTTGAAAGTTCAACACAACCAGTTGATGCAGTTCAGCATGAGGGTGAAGCAACTGATGAATCCTTAATAATGTCATACATGGATCAGTTTAGACCTGTTTGTCAACAGTGGCATCTCAAAAATCTTTTGGCTTTGATAGATAAAGTTGCCACTAACAAGGCTGAGACTGTGCTCTCAAATAGCCTGAAATGTCCAGGGAAGTTAGAATTGTGTGACATTGGACTTTTTTATTCTAACTTACTTAGAATATTTTCAGTCTTGAGTCCAATTCGTGGCTCATTATCAGTTCTCAACATGCTATCATTCACTCCTGGATTTCTTGTGAGATTGTGGGGTGTGCTGGATGATTCCTTTTTTTCTGGAGACAAACATAATTCTGATAATCACACAAGTGAAATCAGCACACATAAAGCCTTTGAGAAGATGCAAAAACAAGTCAGTAAAAATGGAGCTAATAAGTGGACCAACGTACTTCATAAATTTACAGGTAAGTCTCAAGCAGCTACAGAATGCACTGATTCCATTGGCAGTCACTCTGAACCTAGCAGAGTGAATGATGATTCATCAGATGTATGGGACATAGAACCTATGAGGCATGGCCCACTGGGCATTCCAAAGGATATGTTTGCTATGCTTCATCTTTTCTGTGCAACCTATTCTCACCTGCTTTTAGTTCTTGATGACATAGAGTTCTATGAGAAACAGGTTCCATTCAAAATAGAGCAGCAAAGAAGAATTGCATCAATGCTGAATACCCTGGTTTATAATGGCTTGTCCCACGTTAGTGGTAATCATAATAGGCCTCTCATGGATTGTGCTATCAGATGCTTACATTTACTGTATGAAAGGGATTGCAGACACCCATTTTGTCCTCCTGCTTTATGGCTTTCTCCAGCTAGAAAAAGTCGGCCACCAATTGCAGTTGCTGCCAGAACTCATGAAGTTTTAGCAGCCAATCCAAGATCTGATGATTTGTCTGCTTCACTCAGCGTGGGCTCTGTTGTCACCATTGTTCCTCATATTTTCCCTTTTGAGGAGAGAGTCGAGATGTTTCGGGAATTCATCAAGATGGACAAAGTCTCTCGAAAAATGGCTGGTGAAATTTCTGAACCTGGTTCACGAGCCATTGAGATAGTAGTACGTCGGGGTCATATTGTTGAAGATGGATTTCGGCAATTAAATTCCCTTGGGTCAAGATTGAAGTCATCCATCCATGTATCATTTGTCAGTGAATGTGGTCTTCTCGAGGCTGGATTGGACTACGGTGGATTATCTAAAGAGTTTCTGACTGACATATCAAAAGCAGCATTTGCTCCCGAATACGGACTCTTTTCCCAAACCTCAACTTCAGACAGGCTTCTAATTCCAACAGCATCAGCCAGATATTTGGAGAATGGTCTTCAGATGATTGAGTTCCTTGGAAGAGTAGTGGGTAAAGCTCTATATGAAGGAATATTACTTGATTACTCTTTCTCCCATGTTTTTGTACACAAGCTATTGGGAAGATATAGCTTTCTTGATGAATTATCAACTCTTGATCCAGAGCTGTACAGGAATCTTATGTATGTTAAGAATTATGAAAGTGATGTCAAGGAGCTCTCCCTTGATTTCACAGTTACTGAAGAATCCTTGGGCAAAATGTATGAGATTGAACTTAAGACTGGTGGCAAAGATATTTCTGTAACAAATGAGAACAAGATGCAGTACATACATGCAATGGCAGACTACAAACTCAACCAACAGATATTGGCTTTTTCAAATGCGTTTTATAGAGGGTTAACTGATCTTATATCTCCATCCTGGTTGAAGTTATTCAATGCTAGTGAATTTAATCAGTTGCTTTCAGGTGGCAATTACGATATTGATGTTGATGATTTAAAAAATAACACACGATACACTGGTGGTTACAATGAGGGAAGCCGGACAATCAAGATTTTTTGGGAGGTAATTAAAGGCTTTGAACCTAGAGAGCGCTGTATGCTTCTTAAATTTGTCACCAGTTGCTCTCGTGCTCCATTACTTGGGTTCAAATACTTGCAGCCACCTTTTACCATCCATAAGGTTGCATGTGATGTTCCTCTTTGGGCAACAATTGGAGGGCAAGATGTAGATCGGCTTCCGTCAGCTTCAACCTGCTACAATACTCTC 3466 0.4048 MDAPRKQQVSLRGASAKEITRDALLQQVSRERELRNYAKRAAAAALFIQRVWKRFKVTKMVSLQLQQEWEMVVNHYIGVMTANWISNNLLRPFLFFISRMSTQHQNIHSKRIDSMKRCFTILLESLKSSDSKLNFCFLAIGTTEERRIWRYQARQLTSLSFLILSEFSEGNSGAQDIAIVASLAMRVLVMLTDQKGWKGITDDNHLDADLAVKDLIQFMGGNKSGCYVSIGRYISALENHSSQSKTITQADEKFFITASAITLAVRPFYLTNNDVEVPVTLDVNHAAKQYIVYLLTIPWLGQHLPPVLLPALKHKSILFPCFQTLLILKEKVLLEMSEFVKSEVVVSFKAIPAVGWALTNSICLATGSENESFNQGLDYALYVHVVITLAEGLLACLDNIGWVKKKKKALQNDVESSTQPVDAVQHEGEATDESLIMSYMDQFRPVCQQWHLKNLLALIDKVATNKAETVLSNSLKCPGKLELCDIGLFYSNLLRIFSVLSPIRGSLSVLNMLSFTPGFLVRLWGVLDDSFFSGDKHNSDNHTSEISTHKAFEKMQKQVSKNGANKWTNVLHKFTGKSQAATECTDSIGSHSEPSRVNDDSSDVWDIEPMRHGPLGIPKDMFAMLHLFCATYSHLLLVLDDIEFYEKQVPFKIEQQRRIASMLNTLVYNGLSHVSGNHNRPLMDCAIRCLHLLYERDCRHPFCPPALWLSPARKSRPPIAVAARTHEVLAANPRSDDLSASLSVGSVVTIVPHIFPFEERVEMFREFIKMDKVSRKMAGEISEPGSRAIEIVVRRGHIVEDGFRQLNSLGSRLKSSIHVSFVSECGLLEAGLDYGGLSKEFLTDISKAAFAPEYGLFSQTSTSDRLLIPTASARYLENGLQMIEFLGRVVGKALYEGILLDYSFSHVFVHKLLGRYSFLDELSTLDPELYRNLMYVKNYESDVKELSLDFTVTEESLGKMYEIELKTGGKDISVTNENKMQYIHAMADYKLNQQILAFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGNYDIDVDDLKNNTRYTGGYNEGSRTIKIFWEVIKGFEPRERCMLLKFVTSCSRAPLLGFKYLQPPFTIHKVACDVPLWATIGGQDVDRLPSASTCYNTL 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02155 1129 Gene3D Hect, E3 ligase catalytic domains 791 1029 - -
Pste5g02155 1129 SUPERFAMILY Hect, E3 ligase catalytic domain 789 1129 IPR035983 GO:0004842
Pste5g02155 1129 CDD HECTc 789 1129 IPR000569 GO:0004842
Pste5g02155 1129 Gene3D Hect, E3 ligase catalytic domain 915 994 - -
Pste5g02155 1129 ProSiteProfiles HECT domain profile. 813 1129 IPR000569 GO:0004842
Pste5g02155 1129 Pfam HECT-domain (ubiquitin-transferase) 844 1129 IPR000569 GO:0004842
Pste5g02155 1129 Gene3D Hect, E3 ligase catalytic domain 1032 1129 - -
Pste5g02155 1129 FunFam Putative Ubiquitin-protein ligase E3C 915 994 - -
Pste5g02155 1129 SMART hect_3 807 1129 IPR000569 GO:0004842
Pste5g02155 1129 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 6 1129 IPR044611 GO:0000209|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02155 Pste-Chr5 14147129 14167846 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02155 5 14147129 14167846 Pste5g02155 5 14147129 14167846 ECH