Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02143 CCCACTTTCCCTTGTCCGTGTCCCGAGTTTCCTTCTCGCTCCCCGTCTCTGTCTCTGAAATTTCTAGGGTTCCTTTTCTGGCATTCCTTCATTTGCTGAATCTGCAATTACAAACCAGCTAGCAATGTTCAGATTTTGGGGATCACAAGAGCAACAATCGCAGGATGGTTCTTCGCAGTCACAATCGTGGTATCCGCCGTCGGTGGTGAGTTCACCGAGTTCGTCGAGGCCTGTTACTCCGACACCATCTTCTTCTTCATTATCGCAGAGGCCTTCATCACATGTTCCGCCTTCTGAAGCCGCTGGAGTTATTGCCGTTTTGAAGGACAAGAGTGTGGACGAGTTGAGGAAGCTTTTGTCTGACAAAGATGCATATCAACAGTTTTTACATTCTCTTGATCAGGTCAAGATTCAAAATAATCTGAAAGATGAACTTTGCAAGGAGAATTTACAGCTTGCAGAGGAAAATCTTCAAAAGGAACCTCGTATCATGGAACTTAGGAATCAATGTAGAATAATTCGGACAACTGAGTTGGCTGCTGCTAAGGAGAAATTAAATGAGCTTGAGAAGCAGAAAGATGAAATGTTGAAGATGAATTCCCAAGCATCCCTTCTCCAAAGGATTCAAGATTCTGTGAATAAGACTGAAGAGGAATCAGAGAATCTACACCAGCATCTCCTTGACAGTGAGATTGACCTTGGGGCTTTCTTGCAAAAGTACAAGAAGCTTCGTACCACTTACCACAGGAAGACTCTCATACATCTTGCTGCCAAAACATCAACAATGTGAGCATGACATATGAAATATAAGAAAGTAACTTGTTTTGGCAAGTATGTATTTGATTTTTTATTCATTATTGCCAAATGCCAATAGTTGTCATTGGTCAAAGATACTTGCCACCAATTATGTAAAAGTTGCAAGCATTGGGATAGATCGATCTACCATAAATGAGATTGTTTATACATATATGTACAGCCTGAGATGGTTCATTGTGATGACATTGTCGAGTGGTTCCATGCCTTTCATGCCACTTGGGATGAGGTATGGACTTGTCTGCAGTTCTTCACATTTACAATCAAACATTATTTGTATGAACTCTGATGAGATCTCCATCGCTGATATAGGATTTTTTTTACTGTTATATTGTAAACTGTAAAACAAATGCTCTGACTTTCTTTTCTGTGGGAGCAACTAGTTTTAAGGATTCATTCCATGTTAACCGTTGAGAACATGTTGGCGGATTATGCATTTGTGGTGTTCTGTAATAGTAGAACTAGAGCTTAAGTTGAATTTGTTTTTTGGAAAAAACAAATAGCGTTAAACAGGTTCCATCTGATGAAGAAATATTTTAAATATAAGAAAAGTTAATTATGCATTTGTACG 1384 0.3931 MFRFWGSQEQQSQDGSSQSQSWYPPSVVSSPSSSRPVTPTPSSSSLSQRPSSHVPPSEAAGVIAVLKDKSVDELRKLLSDKDAYQQFLHSLDQVKIQNNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELAAAKEKLNELEKQKDEMLKMNSQASLLQRIQDSVNKTEEESENLHQHLLDSEIDLGAFLQKYKKLRTTYHRKTLIHLAAKTSTM 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02143 221 MobiDBLite consensus disorder prediction 1 58 - -
Pste5g02143 221 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 13 219 - -
Pste5g02143 221 SUPERFAMILY Endosomal sorting complex assembly domain 159 209 IPR037202 -
Pste5g02143 221 Coils Coil 130 184 - -
Pste5g02143 221 MobiDBLite consensus disorder prediction 1 54 - -
Pste5g02143 221 ProSiteProfiles VPS37 C-terminal domain profile. 141 221 IPR009851 -
Pste5g02143 221 Gene3D Helix hairpin bin 145 214 IPR029012 -
Pste5g02143 221 Pfam Modifier of rudimentary (Mod(r)) protein 67 210 IPR009851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02143 Pste-Chr5 13989135 13993984 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02143 5 13989135 13993984 Pste5g02143 5 13989135 13993984 ECH
Pste5g02143 5 13989135 13993984 Pste4g02247 4 16235386 16236968 PCT