Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02138 CACAACCACTGGAGTGCCTTACTATTCTATCTAAATTCAAAAGCTTGTTCCTCATACATGGAACACATCTTTACAACCATGAAAATCACTGCAATCACCATAAATCCCTCACTCTCTCCACCCTTTTGTTCCACAGCAACTACCCATGCTTCTTGTTCTTCATCATCTTCTTCACACTCTGCTAGATTTCAGCGCTTTCACTTGTTAGGAGCAAAACCCATTACTGTTTATTGCAGAAGATTACGATTGTGTTCTTTGCAGGGGTCCAAAACTCTTTGGGGTAGAAAAAGTTTTGTGCTTGAAGCTGGAAACTTGACCATGGCAGAGGTTGATTCTCATGAAGAGGGGGAAAACGAGGGTGTTTTGCTTGGCTCCGAGAATGAGAACAATTCAAGGCCTCGGAGAATTGCTCTATTTGTTGAGCCTTCTCCCTTTGCATATGTCTCAGGATACAAAAACCGATTTCAGAACTTCATTAGATGCCTTCGTGAAATGGGAGATGAGGTGATGGTTGTGACAACACATGAAGGAGTGCCCCAGGAATTTTATGGAGCCAAATTAATCGGATCTTGGAGCTTTCCCTGCCCTTGGTATCAGAAGGTACCCCTCTCATTAGCACTTAGTCCAAGAATAATTTCAGAGGTAGCTCGGTTTAAGCCTGACATAATACATGCATCATCGCCAGGAATAATGGTTTTTGGAGCTCTTATTATTGCAAAACTATTGTGTGTTCCTATTGTCATGTCCTATCACACCCATGTACCTGTGTACATTCCAAGATATACTTTTAGCTGGCTGGTGAAACCTATGTGGTTGATCATAAAATTTCTTCACAGAGCAGCTGATCTGACTCTGGTGCCATCTGCTGCCATTGCGGGGGATCTCCTAGCAGCTAGAGTCACAGCAGCTAACAAGATTCGCCTTTGGAACAAGGGTGTTGATTCTGAAAAATTCCATCCTAAATACCGCTCCCATGAAATGCGATTAAGACTAAGCAATGGTGAACCAGAAAAACCCTTGATAGTTCATGTTGGACGGCTTGGAGTAGAGAAGAGTTTAGATTTTCTGAAAAGGCTCATGGATATTCTTCCTGAAGCCCGAATTGCTTTCATTGGAGATGGACCATACAGGGAGGAGCTAGAGAAAATGTTTGAAGGTATGCCTTCAGTATTTACTGGAATGTTAAGAGGGGAAGAACTTTCCCAAGCATATGCCAGTGGAGATGTATTTGTCATGCCTTCAGAATCGGAGACACTTGGTCTTGTAGTCTTGGAGGCCATGTCTTCAGGAATACCTGTGGTGGCGGCACGTGCTGGAGGTATTCCCGATATAATCCCTGCAGATCAAGATGGGAAAACTAGCTATCTGTACAATCCAGGAGATCTTGAAGACTGCTTGAGCAAACTAAGGCCCCTCTTGCTCAACAAAGCTATGAGAGAGTCCATGGGAAAAGCAGCACGTGAAGAGATGGAGAAGTATGATTGGAAGGCGGCCACACAAAAGATTCGCAATGAACAATACAATGCTGCCATTTGGTTCTGGCGCAAGAAAAGAGCTCAACTTTTGAGACCCTTCCATTGGCTGGAAAAACACATTTTCCAATCACTACATGTCAACTAATTGCCTGTTTGGATGCACGTCAACAAAATTGATTATATGTGATGCACTTCACCTTCCAAGTCCTGTTCCTTGCTTTGGCTTCACATTAGACTTGTATGGTATAAATGTGTGGTTGATAGTATTGGCGTGATGCATTCATCGCTTATGAATGTAAGGGAACATTACGGTGGCTTGCACCGTATTGTGTGCCATTGTAAATTGGATCAAGGCCACAGATTTAATCCTTCATTTCACTATTCTATTACATTAAATATTTG 1877 0.4273 MEHIFTTMKITAITINPSLSPPFCSTATTHASCSSSSSSHSARFQRFHLLGAKPITVYCRRLRLCSLQGSKTLWGRKSFVLEAGNLTMAEVDSHEEGENEGVLLGSENENNSRPRRIALFVEPSPFAYVSGYKNRFQNFIRCLREMGDEVMVVTTHEGVPQEFYGAKLIGSWSFPCPWYQKVPLSLALSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWLVKPMWLIIKFLHRAADLTLVPSAAIAGDLLAARVTAANKIRLWNKGVDSEKFHPKYRSHEMRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKRLMDILPEARIAFIGDGPYREELEKMFEGMPSVFTGMLRGEELSQAYASGDVFVMPSESETLGLVVLEAMSSGIPVVAARAGGIPDIIPADQDGKTSYLYNPGDLEDCLSKLRPLLLNKAMRESMGKAAREEMEKYDWKAATQKIRNEQYNAAIWFWRKKRAQLLRPFHWLEKHIFQSLHVN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02138 520 Pfam Glycosyltransferase Family 4 134 297 IPR028098 -
Pste5g02138 520 FunFam Sulfoquinovosyl transferase SQD2 116 311 - -
Pste5g02138 520 Gene3D Glycogen Phosphorylase B; 312 474 - -
Pste5g02138 520 CDD GT4-like 116 488 - -
Pste5g02138 520 Gene3D Glycogen Phosphorylase B; 116 311 - -
Pste5g02138 520 Pfam Glycosyl transferases group 1 317 469 IPR001296 GO:0016757
Pste5g02138 520 FunFam sulfoquinovosyl transferase SQD2 312 474 - -
Pste5g02138 520 PANTHER SULFOQUINOVOSYL TRANSFERASE SQD2 111 499 - -
Pste5g02138 520 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02138 Pste-Chr5 13943883 13948800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02138 61 437 Glycosyltransferase AT5G01220 75.862 0.0 593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02138 5 13943883 13948800 Pste5g02138 5 13943883 13948800 ECH
Pste5g02138 5 13943883 13948800 Pste6g01418 6 6160431 6160916 PCT