Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02093 AATTCTTAAACCTCTCTGGCCTCTCAGATAGAGTGACCGCAGCAAGTATGGTGAAGGCCTACCTCCGATACGAGGCGGCGTCGGCGTTTGGAGTGATAGCGTCGGTGGATTCTAACATAGCATACGACAGCTCCGGCAGACACCTCCTCTCTCCGGCGCTCGAGAAGATCGGCGTTTGGCACGTGCGGCAAGGCGTCTGCACCAAAACCCTAATTCCTTCTTCTCCGTCGCACGGTCCTTCCCTCGCCGTGACCTCCATCGCCTCTTCCCCTTCTTCCTCCTTGATTGCTGGCGGTTACGGTGATGGGAGCATAAGGATTTGGGACTCTGATAAAGGAGTGTGTGAGACTACGTTGAATGGACACAAGGGAGCTGTCACTGCTCTTCGTTACAACAACCCTGGTTCCTTGCTCGCCTCTGGTAGCAAGGATAATGACGTTATTTTGTGGGATGTGGTTGGCGAGGCTGGTCTCTTTCGTCTTCGCGGCCATCGTGATCAGGTAACTGATATAGTTTTCATGAGTTCTGGGACAAAGCTTGTTAGTTCCTCCAAAGACAAGTTCTTGAGAGTGTGGGATCTTGATACCCAGCACTGTATGCAAATTGTTGGTGGCCATCATAGTGAAATATGGTCCTTAGATATTGATCCTGATGAAAAATATCTGGTCACAGGTTCTGCAGATATTGAACTTCGTTTTTATGCAATCAAGCATGAGTCTGTGGATGGGGAGTCTGTAAATGGTGGTGAAGAATCTACTGTTCAAAGCAAATGGGAAGTGTTGAGGCATTTTGGTGAAATTCAGCGGCAAAGTAAGGATAGAGTTGCAACGGTGCAGTTCAACAAGTCAGGAAATCTGCTAGCGTGCCAAGTTGCTGGCAAGACGGTAGAAATATATCGTGTTTTGGATGATGCTGAAGCAAAGCGCAAGGCAAAACGAAGAGTTCACCGAAAGAAAGAGAAGAAGCACAGTAAAGAGGCTTTGGAGGTAGTAGAAAATGGAGACAGGAATAATGAGAACAAAGGAGATAATTCTTCTGTAAATCATGGGCTCATAGAAACAAGTAACCCCACAGTTACTGTGCCTGATGTTTTTAAGCTATTGCATACTATTAGAGCTAGCAAAAAAATATGCTCCATTTCTTTCTGTCCAATCACTCTGAAGAATTCGCGGGCTAGTTTAGCATTGTCCCTGAACAATAATCTGCTTGAGTTTTACACCATTGAAAATGGGGAAACCAAGAAAACACTTGCTATTGATCTTCAAGGGCACCGTTCTGATGTTAGAAGTGTAACACTCAGTTCAGACAATACTTTTCTGATGTCAACCAGTCACAATACAGTAAAGATTTGGAACCCAAGTACAGGTTCATGCCTAAGGACCATTGATTCTGGGTATGGATTATGCAGTTTAATTCTTCCCAGTAACAAGTATGGACTTGTTGGAACTAAAGATGGAACAATAGAAATTATTGACATTGGAAGTGGCACTTGTGTTGAAGTAATGGAAGTTCATGGTGGTTCTGTTCGCTCAATTGCTGCCTTACCACATAAAAATGGTTTTGTCACAGGAAGTGCAGATCATGATGTAAAATTTTGGGAGTACCAAATTAAGCAAAAACCTGGTCAAGCTACTAAGCAACTTGTTGTATCAAATGTCAGTACCATGAAAATGAATGATGATGCTCTTGTAGTTGCAATTAGCCCTGATGCTAAATATATTGCTGTTGCTCTCTTGGATAGTACTGTAAAGGTTCACTTTGTAGACACATTCAAATTCTTCCTTTCATTATATGGCCACAAGCTACCTGTTCTCTGTATGGATATCTCTTCAGATGGAGATTTAATTGTGACTGGCTCTGCAGATAAAAATTTAAAGATCTGGGGTTTGGATTTCGGTGACTGTCATAAATCCATATTTGCGCATGCTGACAGTGTTATGGCAGTGCAATTCGTTCCTAAAACACATTATGTATTCAGTGTTGGAAAAGATCGCCTGGTAAAATACTGGGATGCAGACAAATTTGAACTGCTGTTGACTCTTGAAGGACATCATGCTGATATATGGTGTCTTGCTGTCAGTAGTCGTGGTGATTTTATTGTCACTGGATCCCATGATCGTTCTATCCGCCGCTGGGATCGCACAGAAGAGCAGTTTTTTATTGAGGAAGAAAAGGAGAAAAGATTGGAGGAAATGTTTGAGGCTGATATTGACAATGCTTTCGGAAACAAGTATGCATCAAAGGAAGAAATACCAGAGGAGGGAGCTGTGGCTTTAGCTGGGAAACAAACTCAGGAAACTCTTACTGCAACTGACTTAATTATTGAGAGATTAGACATTGCAGAAGCTGAAAAAAAGCGTATTGCAGAACATCAGGAGGAGAAAAATAACAGAAACAGTGCTGTTTTCCAAGCAAATCCACTTATGAATGGGCTTTCACCTTCTGACTATGTTCTAAGTGCATTTTCAAATGTTCACTCCAATGATTTGGAGCAAACATTATTGGCTTTACCATTTTCAGATGCTCTTAAGATTCTGTCATACTTGAAAGACTGGACTTCATATTCTGATAAGGTTGAGCTTGTTTGTAGAATAGGTACGCTGCTGTTGCAGACACATTATAACCAACTTCTTGCCACACCAGCAGCTCGACCTATCTTGACTGTTTTCAGTGATATTTTTTATGAAAGGGTCAAGCAAATGATGGCTTCAAGATCGGATGCTCTTTTTCATGATGCAAGATCAAAACTGCTGGCCATACGTGCTCGACAATCCAAACGTTTAGAAGAAAGGTCCGATACTGGCGAAGTTAAGCGGAAGAAGAAGAAGACATAAAGTATCGTGTATATTTATTTGGACCTGGTTATGCTCTTGACTATGTTAATGACATGGGTATTTCAATCACAGAAGCGAAATTGGCCTCGACTGGAATATATTTGATTAAATGAAAACAGCGCACAATTGTCATAATATCGTCTTCAACCTAAAGAAAATGATGAGTAGAGGTTGGATCTCCAGAAAAGGTTTATGACCTTGTCAACACGATTCCTTTTACCAGGTGATTGCTGTTTTGATCTGCGGCTTATAACCTGATGAAGATGACATCTTCATTTGAAGAGCGAGCAAGTTTTATACCATTACTGATGTGAGTAGCTCGGATAAAGGTCATTACTTTTTTATGTTGTAATATGTGTAAGCATTATAAATTTTGCCTAAATTTAATACATGATACATTTTTTTCTCATAATTTATTTCACTTTGTTGGTGAATAAATTTTCCCAATGTATTGTAACTATATAAGTGCACACTGCGTGTTTCAAGTTTACA 3326 0.4098 MVKAYLRYEAASAFGVIASVDSNIAYDSSGRHLLSPALEKIGVWHVRQGVCTKTLIPSSPSHGPSLAVTSIASSPSSSLIAGGYGDGSIRIWDSDKGVCETTLNGHKGAVTALRYNNPGSLLASGSKDNDVILWDVVGEAGLFRLRGHRDQVTDIVFMSSGTKLVSSSKDKFLRVWDLDTQHCMQIVGGHHSEIWSLDIDPDEKYLVTGSADIELRFYAIKHESVDGESVNGGEESTVQSKWEVLRHFGEIQRQSKDRVATVQFNKSGNLLACQVAGKTVEIYRVLDDAEAKRKAKRRVHRKKEKKHSKEALEVVENGDRNNENKGDNSSVNHGLIETSNPTVTVPDVFKLLHTIRASKKICSISFCPITLKNSRASLALSLNNNLLEFYTIENGETKKTLAIDLQGHRSDVRSVTLSSDNTFLMSTSHNTVKIWNPSTGSCLRTIDSGYGLCSLILPSNKYGLVGTKDGTIEIIDIGSGTCVEVMEVHGGSVRSIAALPHKNGFVTGSADHDVKFWEYQIKQKPGQATKQLVVSNVSTMKMNDDALVVAISPDAKYIAVALLDSTVKVHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLKIWGLDFGDCHKSIFAHADSVMAVQFVPKTHYVFSVGKDRLVKYWDADKFELLLTLEGHHADIWCLAVSSRGDFIVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFEADIDNAFGNKYASKEEIPEEGAVALAGKQTQETLTATDLIIERLDIAEAEKKRIAEHQEEKNNRNSAVFQANPLMNGLSPSDYVLSAFSNVHSNDLEQTLLALPFSDALKILSYLKDWTSYSDKVELVCRIGTLLLQTHYNQLLATPAARPILTVFSDIFYERVKQMMASRSDALFHDARSKLLAIRARQSKRLEERSDTGEVKRKKKKT 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02093 928 Gene3D - 10 221 IPR015943 GO:0005515
Pste5g02093 928 FunFam Transducin family protein / WD-40 repeat family protein 60 321 - -
Pste5g02093 928 SUPERFAMILY Putative isomerase YbhE 250 574 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 581 622 IPR001680 GO:0005515
Pste5g02093 928 FunFam Transducin family protein / WD-40 repeat family protein 336 449 - -
Pste5g02093 928 CDD WD40 405 697 - -
Pste5g02093 928 ProSitePatterns Trp-Asp (WD) repeats signature. 164 178 IPR019775 -
Pste5g02093 928 Coils Coil 762 785 - -
Pste5g02093 928 PRINTS G protein beta WD-40 repeat signature 600 614 IPR020472 -
Pste5g02093 928 PRINTS G protein beta WD-40 repeat signature 122 136 IPR020472 -
Pste5g02093 928 PRINTS G protein beta WD-40 repeat signature 164 178 IPR020472 -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 623 664 IPR001680 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 405 436 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 103 136 - -
Pste5g02093 928 MobiDBLite consensus disorder prediction 306 323 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 145 180 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 102 IPR001680 GO:0005515
Pste5g02093 928 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 4 925 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 486 518 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 623 655 - -
Pste5g02093 928 MobiDBLite consensus disorder prediction 294 337 - -
Pste5g02093 928 Coils Coil 286 306 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 665 697 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 61 93 - -
Pste5g02093 928 Pfam Dip2/Utp12 Family 800 885 IPR007148 -
Pste5g02093 928 Gene3D - 526 755 IPR015943 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 187 221 IPR001680 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 665 697 IPR001680 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 581 615 - -
Pste5g02093 928 ProSitePatterns Trp-Asp (WD) repeats signature. 122 136 IPR019775 -
Pste5g02093 928 Gene3D - 234 521 IPR015943 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 486 518 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 579 612 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 660 697 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 405 436 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 144 177 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 98 135 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 480 517 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 51 93 IPR001680 GO:0005515
Pste5g02093 928 Pfam WD domain, G-beta repeat 182 212 IPR001680 GO:0005515
Pste5g02093 928 CDD WD40 99 518 - -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 405 445 IPR001680 GO:0005515
Pste5g02093 928 FunFam WD repeat-containing protein 3 isoform A 651 709 - -
Pste5g02093 928 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 63 701 IPR011047 -
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 103 136 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 616 655 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 138 177 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 398 436 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 96 135 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 658 697 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 180 219 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 439 476 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 574 613 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 48 93 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 533 571 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 479 518 IPR001680 GO:0005515
Pste5g02093 928 SMART WD40_4 241 284 IPR001680 GO:0005515
Pste5g02093 928 ProSiteProfiles Trp-Asp (WD) repeats profile. 145 186 IPR001680 GO:0005515
Pste5g02093 928 FunFam WD repeat domain 3 450 642 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02093 564 706 Miscellaneous Gene Families AT5G08390 25.874 8.71e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02093 5 13509959 13525588 Pste5g02093 5 13509959 13525588 ECH