Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01979 ATGCAAAGACAATCGAGCACTAACACAAGCACAGAACAACAACTTAACACTGCTCCAAACACATCAATTTCCACCATGTTTTCTTCGGCAATTTCTCTGAAGCCCTTTCTGCAGTCCCTTGTCATTGATCGTTACACTCAGAGCACAACTGCTGCAAGCAAGTGGGAGTGCTTGGGGTTTAACAAGTCAGCAAATTTCAGTACCAACAGAGTGTTGTGTGCAGAGGGGTTCAAGCTGAATTGCTTGGTCGATAATAGAGAGATGAACTTGGAGTCATCATCATCACCTTTGGTGGATGATGCTGCCATGAGCTTAAGCGAAGAGGATTTAGGGGAGCCTAGTATTTCAACAATGGTGATGAATTTCGAGAACAAGTTTGATCCTTTTGGAGCAATTAGTCCCCCGCTTTACCAAACTGCTACTTTTAAGCAGTCTTCTGCAATAGAAAACGGTCCCTACGACTATACCAGAAGTGGAAATCCCACTCGAGATGCTTTAGAAAGTTTACTGGCAAAACTTGATAAAGCAGATAGGGCCCTGTGCTTCACCAGTGGAATGGCTGCTTTGACTGCTGTTGTTCATCTTGTTGGAACTGGTGAGGAAATTGTCGCCGGAGATGATGTATATGGTGGCTCAGATAGGTTGCTGTCTCAAGTAGTTCCAAGGACTGGAATTGTGGTGAAACGGGTAAATACATGTGATCTAAATGAGGTTGCATCTGCTATTGGACCCAGGACTAAGCTTGTGTGGCTTGAGAGTCCGACCAATCCTCGGATACAAATTTCTGATATTCGAAAAATAGCAGAGATGGCTCATTCACATGGTGCTCTTGTGTTAGTGGACAATAGTATAATGTCACCTGTGTTGTCCCGGCCATTGGAACTTGGAGCAGATATTGTGATGCACTCAGCTACAAAATTTATTGCTGGACATAGTGACATTATGGCTGGTGTGCTTGCTGTGAAGGGTGAAAGGTTGGGGAAGGAGTTGTATTTCTTGCAAAATGCAGAGGGCTCAGGCTTAGCTCCATTTGACTGTTGGCTTTGTTTGCGTGGAATCAAGACAATGGCCCTGCGGATTGAAAAGCAGCAGGATAATGCACAAAAGATTGCTGAGTTCCTTGTCTCCCATCCCCTAGTGAAGAAAGTGAATTATGCTGGCTTGCCTGGTCATCCTGGTCGTGATCTACACTATTCTCAGGCAAAGGGTGCAGGATCTGTGCTTAGCTTCTTGACTGGTTCACTGGCACTTTCAAAGCATATTGTTGAAACCACCAAATACTTCAGCATAACCGTCAGCTTTGGGAGTGTGAAGTCCCTCATAAGCATGCCCTGCTTTATGTCACATGCTAGCATACCTGCTGCAGTGCGTGAGGCCAGGGGTTTAACTGAAGATCTTGTACGCATATCTGTGGGAATTGAGGATGTGAATGATCTAATTGCTGATCTAGATAATGCACTTAGAACTGGACCTCTTTAATATTATTTTTTTTTTTCCAAAATATTCATCTTAAAAGTTGGATTAGTAAGATGTTAGCACGATAAGATTTGGAGCATTGTTATACTTTCTTTGATTCTTGTGAGTGGAAATTTGAAGTGTTTCTTGTGTGTATGTAAAAAGAGTTCATATTTCTTGTAATTTTTTAGTAGCAATTGTTATCCTCACAGTAATATGTCAGGTCATACAAGTTCTTAAAGAGAGG 1702 0.4254 MQRQSSTNTSTEQQLNTAPNTSISTMFSSAISLKPFLQSLVIDRYTQSTTAASKWECLGFNKSANFSTNRVLCAEGFKLNCLVDNREMNLESSSSPLVDDAAMSLSEEDLGEPSISTMVMNFENKFDPFGAISPPLYQTATFKQSSAIENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALTAVVHLVGTGEEIVAGDDVYGGSDRLLSQVVPRTGIVVKRVNTCDLNEVASAIGPRTKLVWLESPTNPRIQISDIRKIAEMAHSHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDIMAGVLAVKGERLGKELYFLQNAEGSGLAPFDCWLCLRGIKTMALRIEKQQDNAQKIAEFLVSHPLVKKVNYAGLPGHPGRDLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFSITVSFGSVKSLISMPCFMSHASIPAAVREARGLTEDLVRISVGIEDVNDLIADLDNALRTGPL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01979 492 CDD CGS_like 130 488 IPR000277 GO:0019346|GO:0030170
Pste5g01979 492 NCBIfam cystathionine beta-lyase 116 489 IPR006238 GO:0004121|GO:0071266
Pste5g01979 492 Pfam Cys/Met metabolism PLP-dependent enzyme 117 487 IPR000277 GO:0019346|GO:0030170
Pste5g01979 492 Gene3D - 114 356 IPR015421 GO:0003824
Pste5g01979 492 Gene3D Aspartate Aminotransferase, domain 1 357 490 IPR015422 GO:0003824
Pste5g01979 492 ProSitePatterns Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 298 312 IPR000277 GO:0019346|GO:0030170
Pste5g01979 492 FunFam Cystathionine gamma-synthase homolog 113 355 - -
Pste5g01979 492 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 115 488 IPR000277 GO:0019346|GO:0030170
Pste5g01979 492 SUPERFAMILY PLP-dependent transferases 122 488 IPR015424 -
Pste5g01979 492 FunFam Cystathionine beta-lyase 356 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01979 Pste-Chr5 12553134 12560217 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01979 5 12553134 12560217 Pste5g01979 5 12553134 12560217 ECH