Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01978 GCCAAACTTAGCTTCAACAGTGAGGACCACCTGATTAAAAATAAGAAAAAAAAAAGAAAAAGAAAAAAGAGAAGCTAGGATTCACAATCACTGCCATGCCTGCAGCGCCATTCTCGTGTTCCTTCCTCACCTTGCAACCACGCTTCAATTCATTCGTTAACCCTATCTTCCGTTCGCTCAGCTTCCAACTCTCTTCTTCGCCGCTCCCATTCAATGCTAACTTCTCCAGCTTCAGACTCCACTCTTCGCTCTCGCGAGCGGCAGAGACCGATTCTCCCACCGGCGGCAGGACCGTCGCGTTAACTCCCGGTCCCACCGTCGCCGGCGACGTTCAGAAAATCGACGTCAATCCTCCCAAGGGAACGCGTGACTTCCCGCCCGAAGAAATGCGCTTGCGCAACTGGCTCTTCAACCAGTTCAAAGAGGTTTCGCGGTTGTATGGATTCGAAGAGGTTGATTATCCAGTGCTTGAGTCGGAGGCATTGTTCACTAGGAAAGCAGGAGAAGAAATTAAGGACCAGCTTTATTGTTTTGAAGATCGGGGCAATCGTCGTGTTGCATTAAGGCCAGAGCTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGGAAGTCTGTATCATTACCAATAAAGTGGTTCACTGTTGGACAATGTTGGCGGTACGAAAGAATGACAAGGGGGCGTCGTCGTGAGCACTACCAGTGGAACATGGATATTATTGGTGTTCCTGGGATTATGGCTGAAGCCGAGCTTATATCGTCCATTGTCACTTTTTTTAAGCGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCCAGTAGAAAGGTTCTACAGGAAGTATTAAATTGTTATTCAGTACCAGAAAATTTATTTGGCAAGGTTTGCGTCATTATTGACAAAATTGAGAAAATTTCAGTTGATGAGATAAAGAAAGAGTTGAAAACTGTTGGTCTATCAGAAGAGGCTGTTCAGGACCTATTGCAAGTACTTTCTGTGAAGTCATTGACAGAGTTAGAAGAGAGACTTGGGAGCAGTGGGGAAGCAATTGCTGATTTGAAACAGTTATTCTCCCTTGCTGAAAAAATTGGTTACTCTAAATGGCTTCAGTTTGATGTGTCAGTTGTTCGAGGTCTTGCTTACTACACTGGCATTGTATTTGAGGGTTTTGACCGAGAAGGAAAGCTACGAGCTATCTGTGGTGGCGGCCGATACGATAATTTATTCTCAACTTTTGGTGCTGATGATGTAGCTGCTTGTGGTTTTGGATTTGGTGATGCTGTCGTAGTGGAATTGAGTGTGATTTATGCACTTAAGCAACAATCTAATCTCCTCCTCCTCAATGGTTGTTTGCTTCAACCAACACCACCACTATACTTGTCTCCCTTCGGCGAGTCTGACGTAGTGGTCTCCATTTATACAAATATGATTGGTTATTCCATGTCAAGGGCTTTCTTTGTGGGTCTAAACTTGATAACACTTTTCTTTGGGTTATGTTTTGGTTTTGGTTCTGAAAAATTACAATATGACTTCTTGTTAATTTTTTTCCTAGTACCATCTGTCATCATTATCTAA 1580 0.4342 MPAAPFSCSFLTLQPRFNSFVNPIFRSLSFQLSSSPLPFNANFSSFRLHSSLSRAAETDSPTGGRTVALTPGPTVAGDVQKIDVNPPKGTRDFPPEEMRLRNWLFNQFKEVSRLYGFEEVDYPVLESEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPIKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGIMAEAELISSIVTFFKRIGITESDVGFKVSSRKVLQEVLNCYSVPENLFGKVCVIIDKIEKISVDEIKKELKTVGLSEEAVQDLLQVLSVKSLTELEERLGSSGEAIADLKQLFSLAEKIGYSKWLQFDVSVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDNLFSTFGADDVAACGFGFGDAVVVELSVIYALKQQSNLLLLNGCLLQPTPPLYLSPFGESDVVVSIYTNMIGYSMSRAFFVGLNLITLFFGLCFGFGSEKLQYDFLLIFFLVPSVIII 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01978 494 Gene3D Bira Bifunctional Protein; Domain 2 80 404 IPR045864 -
Pste5g01978 494 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 89 424 IPR006195 -
Pste5g01978 494 SUPERFAMILY Class II aaRS and biotin synthetases 86 400 IPR045864 -
Pste5g01978 494 PANTHER HISTIDYL-TRNA SYNTHETASE 81 403 IPR004516 GO:0005737
Pste5g01978 494 Pfam Histidyl-tRNA synthetase 89 393 IPR041715 -
Pste5g01978 494 CDD HisRS-like_core 97 402 IPR041715 -
Pste5g01978 494 FunFam Histidine--tRNA ligase chloroplastic/mitochondrial 80 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01978 Pste-Chr5 12545140 12567739 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01978 5 12545140 12567739 Pste5g01978 5 12545140 12567739 ECH