Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01976 ATGAAATCTCATACCTCTGTTGTAAATAATAAAAATAGGGTACTGGCGTACTCTTACTTTTTTCAAAATCTGCGTCCTATCGCCGACCCAACGGTTCTTTTTTCCATTTCATGGCTTCTTCCGGATACTCAAAAGAAAATAGAAGCGAAGAATGAGGCCGATAAGAAAGCAGAATCGGGAGCAAAGCCAAACGACGCACCCATTCCTGTCGTTTTTAAACTCGACATGCATTGCGAGGGATGCGTCAAGAAGATTAAGCGCGTTGTTCGACATTTCGACGGTGTGGAAGACGTTAAGGCCGATCTGTCAGGCAACAAACTAACGGTTATTGGAAAAATCGACCCTGCCAAACTGCGAGATAAACTGGCGGACAAAACTAAGAAAAAGGTTGAGCTCATTTCTCCTCAGCCTAAGAAAGATTCTGCCGGCGAAAAACCACCGCAGGAGAAAAAACCTGAAGAGAAAAAGCCCGAAGAAAAATCTCCCAAAGAGGTTCGTGGTTTCAAATTTTCTCACCACGCGAGCACCGCGGTGCTGAAGATGAGATTGCACTGTGACGGTTGCATTCAGAAAATTCGAAAGATTATCCTCAGGACCAAAGGAGTTGAAGGGGTGAATATAGAGGGAGGGAAGGATTTGGTGAGCGTAAAGGGAACGATGGAGGTGAAGGAAATGGTAGCGTATTTGAAGGAGAAGTTGAAGAGGAACGTTGAAGTGGTCCCACCAAAGAAAGAGGAAAATAAGAAAGAGAAGGAGAAGGAGAAGGAGGAGAGTGAAAGTGGTGGTGACAAGGGTGGGAAAAAAGAAGAGGTTGCAGCGAAGGTGGAGATTAAGAAAATGGAGCACTACGGGTACGCGTACCAAGCTGCGCCTATGTATTGGTACGAAGCTGGTGAAAGTAGCAATGGAAGCAGTCACGCCATAGAGGTGCAACCAGCAGGAGGGTATTTGAATGAAGGGTATGATGGTAATGATAAAGGGAATTACCATTACCAACATGGGTATGTGAACCAAGGGTACATGGTACAACCACCCCCCTTCTACTTCAATCCTCACCATCCACCACCACAGATGTTCAGCGACGAGAATCCCAATGCGTGTTCTGTGATGTGAGCCATCCCCATCATCATTATTTTCATGTATAAACATGCAGGGTGTAAATAACAATTTTATTTATTAAAAATAGGCTTATGTATAGCAACTACTAAAAAAAATGTAGCACAACTTTTGCTATTATGGCTGAGTTAGTGACGTAGTGAGCGTACGGCCGGCTGCCTCCACAGTTCGGTTAATGTAATGATTTAAAAAGACTAGTTGTAGGCTTGTTAGCTAGCTCTTTTTGTTTGATTTTTATCCACTTATTTATACTTCCTACTTACTTTTTGAGTCTTTTTCATGCTTGTAAGTTGTAACTAGCCATTTATGTTTGATGCAC 1435 0.4307 MKSHTSVVNNKNRVLAYSYFFQNLRPIADPTVLFSISWLLPDTQKKIEAKNEADKKAESGAKPNDAPIPVVFKLDMHCEGCVKKIKRVVRHFDGVEDVKADLSGNKLTVIGKIDPAKLRDKLADKTKKKVELISPQPKKDSAGEKPPQEKKPEEKKPEEKSPKEVRGFKFSHHASTAVLKMRLHCDGCIQKIRKIILRTKGVEGVNIEGGKDLVSVKGTMEVKEMVAYLKEKLKRNVEVVPPKKEENKKEKEKEKEESESGGDKGGKKEEVAAKVEIKKMEHYGYAYQAAPMYWYEAGESSNGSSHAIEVQPAGGYLNEGYDGNDKGNYHYQHGYVNQGYMVQPPPFYFNPHHPPPQMFSDENPNACSVM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01976 370 SUPERFAMILY HMA, heavy metal-associated domain 176 231 IPR036163 GO:0046872
Pste5g01976 370 Pfam Heavy-metal-associated domain 72 124 IPR006121 GO:0046872
Pste5g01976 370 Pfam Heavy-metal-associated domain 182 235 IPR006121 GO:0046872
Pste5g01976 370 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 51 370 IPR044594 GO:0046872
Pste5g01976 370 Gene3D - 173 246 - -
Pste5g01976 370 Gene3D - 68 140 - -
Pste5g01976 370 ProSiteProfiles Heavy-metal-associated domain profile. 67 130 IPR006121 GO:0046872
Pste5g01976 370 MobiDBLite consensus disorder prediction 126 169 - -
Pste5g01976 370 MobiDBLite consensus disorder prediction 142 169 - -
Pste5g01976 370 MobiDBLite consensus disorder prediction 240 269 - -
Pste5g01976 370 SUPERFAMILY HMA, heavy metal-associated domain 71 125 IPR036163 GO:0046872
Pste5g01976 370 CDD HMA 76 131 IPR006121 GO:0046872
Pste5g01976 370 CDD HMA 183 218 IPR006121 GO:0046872
Pste5g01976 370 ProSiteProfiles Heavy-metal-associated domain profile. 174 237 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01976 Pste-Chr5 12530892 12533225 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01976 5 12530892 12533225 Pste5g01976 5 12530892 12533225 ECH
Pste5g01976 5 12530892 12533225 Pste4g02056 4 15076404 15076936 PCT