Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01975 CAAGAATGAATTGTTGTTGAATGTGGGACGAGGAGAGCAGAGCAGTGAGTTAAAAAGGAAAAGAGTTGGATCGAAGAAGAAGAGTGAGAGAGAGAGAGAGAGATGGCAGTGAACGGGACAGCAGCGATAGAGTGGGAGAAAGTGGGAGGAGAGGCAGAGGAAGTGAAAGGGTGTTTGAGTAAGTTGATAGATGATGGCACCGTTGAGAGTCACAGATACTATTTGTCTCGCAGAACCACTCTCGAAATGCTCAGAGACAGAGGCTACTCTGTTCCCTCTCACGACATCCACCTCTCTCTCTCTGATTTCCGCCACATGCACGGCCCTTCCCCCCACCCTGATCGCCTCCGCCTCACTCTCACTCACTCCTCCAACCCTTCCAAAAGGGTTTTGGTCATTTTCTGTGGACCAGGTATTGTCAAAGTTAATGCCATTCGCAACATTGCAGGGCAGATTGTTAATAGAGACACTTTGACTGGCCTCATATTGATTGTGGAGAATCATATTACTAGCCAGGCCTTGAAAGCAGTCAATATTTTCTCTTTCAAGGTTGAAATTTTCCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTATTGAAGCCAAAGCATCAGTTGTTGACTGATAAGCAGAAGAAAAATCTCTTGAAGAAGTACAACATTGAAGAGAAGCAGCTTCCCCGCATGCTGCAGACAGATGCAATTGCCCGATATTATGGACTTGAGAGGGGCCAAGTAGTTAAGGTTACCTATAGTGGTGAAATCACCCAGATGCATGTAACATATCGATGTGTTTGGTGATAGGTTCCAGATGTGTTTGGTGATAGGTTCCAGTGTTGTTACATTTTGCTGGTTGAACTTGCAGTAGTCAGCTGTTGTATAATATGATTAAGTTTATTATGATTGAACAAGTTCTAGATGATCAATCCTAATGCGTGTTTTGTTTTTCTCTCAAACTTGGT 965 0.4352 MAVNGTAAIEWEKVGGEAEEVKGCLSKLIDDGTVESHRYYLSRRTTLEMLRDRGYSVPSHDIHLSLSDFRHMHGPSPHPDRLRLTLTHSSNPSKRVLVIFCGPGIVKVNAIRNIAGQIVNRDTLTGLILIVENHITSQALKAVNIFSFKVEIFQITDLLVNITKHVLKPKHQLLTDKQKKNLLKKYNIEEKQLPRMLQTDAIARYYGLERGQVVKVTYSGEITQMHVTYRCVW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01975 233 Gene3D - 158 233 IPR035913 -
Pste5g01975 233 Gene3D - 31 157 IPR036710 GO:0003677|GO:0003899|GO:0006351
Pste5g01975 233 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 33 233 IPR014381 GO:0003899
Pste5g01975 233 SUPERFAMILY RPB5-like RNA polymerase subunit 158 233 IPR035913 -
Pste5g01975 233 FunFam DNA-directed RNA polymerases I, II, and III subunit RPABC1 158 233 - -
Pste5g01975 233 Pfam RNA polymerase Rpb5, N-terminal domain 35 117 IPR005571 GO:0003677|GO:0003899|GO:0006351
Pste5g01975 233 Pfam RNA polymerase Rpb5, C-terminal domain 160 232 IPR000783 GO:0003677|GO:0003899|GO:0006351
Pste5g01975 233 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 34 161 IPR036710 GO:0003677|GO:0003899|GO:0006351
Pste5g01975 233 PIRSF RPB5 28 233 IPR014381 GO:0003899
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01975 Pste-Chr5 12524465 12529663 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01975 5 12524465 12529663 Pste5g01975 5 12524465 12529663 ECH