Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01968 AGTGCCTGGTGGCCACACGAACCAAAGCGGCAAGCCAATGTTCTATGATGTTCTGTTCCTTAGCTTCTGCATGTGAAATTGTTCCAATGCTTCATTCTCTTCCCTTCCTCCACTCCACGGTAAGCATGAACAATAATTTCTCCTTTCTTATTTTGAGAGATTTGTATGATACTATGGATACTTTGCTCAAAACACCTAATAAGCTTGAGTTTTTGCACCCACTTCACGGCTACTCAGAAAAATTGACCTCCTCTAGGGTGCAAAATCAGGATTTTAGGTTTGGTTCTAAGAAACCTGTTGTGAGGTGGGGTAAATGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTTTGGAGCTTGTTCCTGAATTCAAGAAGGAGAATCTGGATTTTGAACTTCCTTTGTATGATTCCTCAAAGGGGGCTGTGGTGGACCTTGCTGTGGTGGGAGGGGGGCCTGCTGGGCTTGCAGTTGCCCAGCAGGTTTCTGAGGCGGGGCTTTCAGTTTGTGCCATTGATCCAAATCCCAGATTGATTTGGCCTAATAATTATGGGGTTTGGGTAGATGAGTTTGAGGCAATGGATTTGCTTGATTGCCTTGACACCACTTGGTCCGGTGCTGTTGTCTTCATCGATGATAAAACAAAGAAGGATCTAGATAGACCTTATGGTAGGGTCAATAGGAAGCTGCTCAAGTCAAAGATGCTGCAGAAATGCATATCCAATGGTGTCAAGTTTCACCAAGCCAAAGTTATCAAGGTTATTCATGAGGATGCAAAATCTTTGCTGATTTGTAATGATGGAGTCACTGTTCAGGCTACTGTGGTTCTTGATGCAACTGGCTTTTCTAGATGCCTTGTTCAGTATGATAAACCGTATAATCCGGGTTACCAAGTTGCTTATGGGATTTTAGCTGAGGTTGATGAACACCCATATGATGTAGATAAAATGCTTTTTATGGACTGGAGAGATTCTCATCTGAACAATGACATGGAACTGAAGCAGAGAAATGGTAGGATACCCACCTTTCTGTATGCAATGCCCTTTTCATCCACTAAGATATTTCTTGAAGAAACTTCTCTTGTTGCACGCCCTGGGTTACGCATGGATGATATACAGGAACGAATGGTTGCTAGATTGAAACACTTAGGTATTAGAGTGAAAAGCATTGAAGAGGATGAGCACTGTGTCATTCCCATGGGTGGCCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGCATTGGTGGTACAGCTGGCATGGTGCATCCTTCGACTGGGTATATGGTGGCAAGGACCCTAGCTGCAGCTCCTATTGTTGCTAATTCTATTGTTCAGTGCCTTGGCTCTGGCAGAGGCCTTTCAGGAGGTGAAATATCTTCACAAGTGTGGAAAGATTTATGGCCAATCGAAAGGAGGCGACAAAGGGAGTTCTTTTGTTTTGGTATGGACATCTTACTCAAGCTTGATTTACCAGGCACAAGGAGATTTTTTGATGCGTTTTTTGATCTGGAACCTCATTACTGGCATGGATTCTTATCATCAAGACTGTTTCTTCCTGAGCTTATATTTTTTGGACTCTCTCTATTTTCTTATGCTTCTAATACATCTAGGATAGAGATTATGGCAAAAGGAACTCTTCCTTTGGTAAACATGATCAACAACTTGGTAAAAGATACAGAA 1676 0.4308 MMFCSLASACEIVPMLHSLPFLHSTVSMNNNFSFLILRDLYDTMDTLLKTPNKLEFLHPLHGYSEKLTSSRVQNQDFRFGSKKPVVRWGKCGGLRASSSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVIKVIHEDAKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPYDVDKMLFMDWRDSHLNNDMELKQRNGRIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSGRGLSGGEISSQVWKDLWPIERRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELIFFGLSLFSYASNTSRIEIMAKGTLPLVNMINNLVKDTE 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01968 544 SUPERFAMILY FAD/NAD(P)-binding domain 128 512 IPR036188 -
Pste5g01968 544 FunFam lycopene epsilon cyclase, chloroplastic 125 463 - -
Pste5g01968 544 Pfam Lycopene cyclase protein 129 521 - -
Pste5g01968 544 NCBIfam lycopene cyclase family protein 129 524 IPR010108 GO:0016117|GO:0016705
Pste5g01968 544 Gene3D - 126 463 IPR036188 -
Pste5g01968 544 PANTHER - 94 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01968 Pste-Chr5 12489510 12491299 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01968 5 12489510 12491299 Pste5g01968 5 12489510 12491299 ECH