Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01942 CGGGAATCTAGATTGGTGCCCGACGCGCAGCATGGACGTGAGCACAGGGTGCAGAAACCCAGAGAGAGTGGCGCAGAGAGAGTTGGTGACACTCTCTGTGTGACTCAGCCTCTTCCTGACCTCTCCCTCTTCGCCCTTTTATCTTCATTCTCACTCACCCACTCCATTCTATTTCTATTCTCCACACACACTCTCACACACTCTCTCTCGATGGCGCTGCACTCCGTGTCTTCCTTTTCGCACGTGCTGCGCCTCGCCGAGCCATTCCCTTCCCTCCACAACGCCCACGTGCTCCTCCACCTCATGCCTCTCCGCCGCAAATCCAAGCGTCGCACTCGCAGATTCACGGCCTTTCCCTCGCCGTCGCCGCTCCCACATTCAGCCGTCAAAGCCGTTCTCCACCTCGACCGTCATTTCCCTGCTTCCTCTTCTTCCGATTCCAAACCGCAGGTTGCAAACTTGGAGGACATAATATCAGAGAGAGGAGCCTGTGGGGTTGGATTCATTGCCAATTTGGAGAATAAGGCTTCATATGAGATTGTCAAGGATGCTTTAAATGCTTTAGGTTGTATGGAACATCGTGGTGGGTGTGGAGCAGATAATGACTCTGGTGATGGTTCAGGGCTGATGACTGCAATTCCATGGGATCTATTTGACAATTGGGCCAATAAGCAAGGGATTACTTCCCTTGATAAGTTGCACACCGGTGTAGGAATGGTTTTCTTACCCAAAGATGAACAACTTCTCAATGAGGCGAAGAAAGTTATTGTAAATACTTTTCAACAAGAAGGTCTTGAGGTTCTTGGTTGGAGGCCTGTCCCTGTAAATACTTCCGTAGTAGGTTATTATGCAAAGGAGACCATGCCCAATATACAGCAGGTATTTGTTAAGATTGTGAAAGAAGAAAATGTTGATGACATTGAACGAGAACTGTACATCTGTCGGAAATTGATTGAAAAAGCTATAAGCTCAGAAAGTTGGGGAAATGAGCTTTATTTCTGTTCTTTATCCAATCAAACCATAGTTTACAAGGGGATGCTTCGCTCAGAAGTGCTTGGGTTATTTTATTCTGACCTTCAAAATGATCTTTACAAGTCCCCTTTTGCCATTTATCATCGAAGGTACAGCACAAATACTAGTCCCAGATGGCCTCTTGCACAACCGATGAGGCTTCTTGGTCATAATGGAGAGATCAACACCATACAGGGGAACTTGAATTGGATGCAATCACGAGAACCGTCATTGAAGTCACCTGTATGGCGAGGGCGAGAAAATGAAATTCGTCCTTATGGAAATCCAAAGGCATCAGACTCAGCAAATCTTGACAGTACTGCAGAATTATTGATAAGAAGTGGTCGAAGTCCTGAGGAAGCTATGATGATTCTTGTTCCAGAAGCTTATAAAAATCATCCAACTCTATCAATCAAATATCCTGAGGTGGTTGACTTCTATGACTACTACAAGGGTCAGATGGAAGCTTGGGATGGACCAGCCTTGCTTTTATTCAGTGACGGAAAAACTGTTGGTGCGTGCCTTGATCGTAATGGACTTCGACCTGCTCGGTATTGGCGAACATCAGACAATATGGTCTATGTTGCCTCTGAGGTTGGTGTCGTGCCAGTGGATGAGTCAAAAGTTGTCTTGAAAGGCCGTTTGGGTCCAGGCATGATGATAACGGTTGATTTACTTGGTGGCCAGGTCTATGAGAATACGGATGTTAAAAAACGAGTAGCCTTATCAAACCCATATGGGAACTGGATCAAGGAAAATTTGCGGTCTTTGAAGCCTGGGAACTTCCTTTCAACCTCTGTGATGGACAACGAGGCAGTATTAAGACACCAACAGGCATTTGGGTATTCTAGTGAAGATGTCCAGATGGTGATCGAGAGTATGGCTGCTCAAGGAAAGGAGCCCACGTTTTGTATGGGAGATGATATTCCATTGGCAGCATTGTCTCAGAAACCTCACATGCTTTTTGATTATTTCAAGCAACGGTTTGCACAGGTTACGAATCCTGCAATTGACCCTCTTCGAGAAGGATTGGTTATGTCTCTTGAAGTGAATATAGGTAAGAGAGGGAATATATTGGAAACTGGGCCAGAGAATGCTTCACAGGTTATGTTACCTAGTCCAGTATTGAATGAAGGGGAGCTTGAGTCATTACTAAATGACTCCCACTTGAAACCACAAGTATTACCTACATTTTTTGATATTACTAAGGGAATTGAAGGTTCCTTGGAGAAAGCATTAAATAAGCTCTGTGAAGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAGCTGCTTATTCTATCAGACCGTTCAGAAGCACTGGAACCAACTCATCCTGCAATTCCTATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCCAGAATGGCCTGCGGATGTCAGCTTCAATTGTAGCAGATACTGCTCAGTGCTTTAGCACTCACCAGTTTGCCTGTTTAGTAGGATACGGTGCAAGTGCTGTGTGTCCATACTTGGCATTGGAGACATGTCGGCAGTGGCGTTTGAGTAATAAAACTGTAAATCTGATGAGGAATGGAAAGATGCCTACAGCTGTAAAAGCTGGCCTTCTTAAAATTCTTTCCAAAATGGGCATCTCATTGCTTTCAAGTTACTGTGGTGCACAAATATTTGAAGTGTATGGATTAGGGAAGGAAGTTGTTGATCTTGCATTCAAAGGAAGTGTGTCAAAAATTGGTGGATTAACTTTTGATGAGGTGGCGAGAGAGACTTTGTCTTTCTGGGTTAAGGCATTCTCTGAAGATACAGCTAAAAGGTTGGAAAATTTTGGATTTATACAGTTCAGACCAGGAGGGGAGTATCATGCAAATAACCCAGAAATGTCGAAATTGCTCCACAAAGCAGTTCGTCAGAAAAGTCAAAGTGCCTTTTCAGTTTATCAGCAATATTTGGCTAATCGACCTGTGAATGTTCTCCGTGATCTTCTTGAATTCAAAAGTGATCGTGCTCCAATACCTGTCGGGAAGGTTGAATCTGCTTCATCTATTGTGAAACGGTTTTGCACTGGAGGCATGTCACTTGGAGCTATTTCCAGAGAAACTCATGAAGCAATTGCTATTGCCATGAACAGAATAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCTATTCGCTGGAAAGCGCTTACTGATGTTGTTGATGGTTACTCTCCAACCCTTCCACACCTTAAAGGTCTTCAAAATGGGGATATTGCTACTAGTGCCATCAAGCAGGTTGCTTCAGGAAGGTTTGGTGTCACCCCAACATTCTTGGCAAATGCTGATCAGTTAGAAATCAAGATTGCCCAAGGCGCAAAACCTGGTGAAGGTGGGCAATTGCCTGGAAAAAAAGTTAGCATGTATATTGCTAGGTTGAGAAATTCTAAACCCGGAGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTATTCTATTGAGGACCTTGCTCAATTGATCTTTGATCTTCATCAGGTGAACCCTAAGGCCAAGGTCTCAGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCAAAGGGCAATGCTGACATTATACAGATTTCAGGACACGATGGGGGAACAGGAGCAAGCCCTATAAGTTCCATCAAGCATGCGGGAGGTCCTTGGGAACTTGGGCTTACAGAATCTCACCAGACACTCATTGAAAATGGACTTAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTTGATGTCATCATGGCTGCAGTAATGGGTGCTGATGAATATGGGTTTGGTTCAGTAGCAATGATTGCTACAGGATGTGTTATGGCTCGCATTTGCCACACCAATAATTGCCCTGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGCTTTCCTGGTGTTCCTGGTGATCTTGTCAATTATTTTCTGTATGTAGCTGAGGAGGTAAGAGGCATATTGGCACAGCTGGGTTATGAGAAGTTGGATGATGTGATTGGTCGGACTGACTTGTTGCAACCAAGAGACATATCTCTAGCAAAAACTCAGCATCTAGATCTGGGCTATATCCTCTCTAGTGCTGGATTACCTAAATGGAGCAGTACAGAAATTAGGAATCAGGAGCCACATACCAATGGTCCTGTTCTGGATGATGTTTTGCTAGCAGACCCAGAGATAGCAGATGCCATTGAAAATGAAAAGGTGGTTAATAAGACCATAAAAATATACAACATTGACCGTGCTGTTTGTGGACGTATAGCTGGTGTCATTGCAAAGAAGTACGGTGACACTGGTTTTGCTGGACAGTTGAATATAACATTTACAGGAAGTGCTGGGCAGTCATTTGGATGTTTTCTGACACCTGGAATGAACATTCGCCTGGTAGGAGAGGCAAATGATTATGTTGGAAAGGGCATTGCTGGAGGTGAGTTGGTTATCACTCCAGTTGACAAGACAGGGTTTGAACCTGAGGATGCAGCTATTGTAGGGAACACTTGCTTGTATGGGGCAACTGGTGGACTGGTCTTCATTAGAGGGAGAGCTGGGGAAAGATTTGCTGTCAGAAACTCACTTGCTGAAGCTGTGGTTGAAGGCACAGGTGATCATTGCTGTGAGTACATGACTGGTGGCTGTGTGGTTGTCTTGGGAAAAGTGGGTAGAAATGTAGCTGCTGGAATGACCGGAGGATTGGCTTACATTCTTGATGAGGACAATACTCTCATACCCAAGGTAAACAGAGAAATTGTAAAAATCCAACGACTGTCAGCCCCTGTTGGTCAGATGCAACTGAAGAACCTGATTGAAGCTCATGTTGAAAAAACTGGTAGTACCAAAGGTGCGGCTATTTTGAAGGACTGGGACAACTATTTATCACTATTTTGGCAGCTGGTTCCACCTAGTGAAGAGGATACCCCTGAGGCAAATGCTAAGTATGACACAACTACGGCCGAG 4983 0.4457 RESRLVPDAQHGREHRVQKPRESGAERVGDTLCVTQPLPDLSLFALLSSFSLTHSILFLFSTHTLTHSLSMALHSVSSFSHVLRLAEPFPSLHNAHVLLHLMPLRRKSKRRTRRFTAFPSPSPLPHSAVKAVLHLDRHFPASSSSDSKPQVANLEDIISERGACGVGFIANLENKASYEIVKDALNALGCMEHRGGCGADNDSGDGSGLMTAIPWDLFDNWANKQGITSLDKLHTGVGMVFLPKDEQLLNEAKKVIVNTFQQEGLEVLGWRPVPVNTSVVGYYAKETMPNIQQVFVKIVKEENVDDIERELYICRKLIEKAISSESWGNELYFCSLSNQTIVYKGMLRSEVLGLFYSDLQNDLYKSPFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPYGNPKASDSANLDSTAELLIRSGRSPEEAMMILVPEAYKNHPTLSIKYPEVVDFYDYYKGQMEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPVDESKVVLKGRLGPGMMITVDLLGGQVYENTDVKKRVALSNPYGNWIKENLRSLKPGNFLSTSVMDNEAVLRHQQAFGYSSEDVQMVIESMAAQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILETGPENASQVMLPSPVLNEGELESLLNDSHLKPQVLPTFFDITKGIEGSLEKALNKLCEAADEAVRNGSQLLILSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIVADTAQCFSTHQFACLVGYGASAVCPYLALETCRQWRLSNKTVNLMRNGKMPTAVKAGLLKILSKMGISLLSSYCGAQIFEVYGLGKEVVDLAFKGSVSKIGGLTFDEVARETLSFWVKAFSEDTAKRLENFGFIQFRPGGEYHANNPEMSKLLHKAVRQKSQSAFSVYQQYLANRPVNVLRDLLEFKSDRAPIPVGKVESASSIVKRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKALTDVVDGYSPTLPHLKGLQNGDIATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLIENGLRERVILRVDGGFRSGVDVIMAAVMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNYFLYVAEEVRGILAQLGYEKLDDVIGRTDLLQPRDISLAKTQHLDLGYILSSAGLPKWSSTEIRNQEPHTNGPVLDDVLLADPEIADAIENEKVVNKTIKIYNIDRAVCGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGKGIAGGELVITPVDKTGFEPEDAAIVGNTCLYGATGGLVFIRGRAGERFAVRNSLAEAVVEGTGDHCCEYMTGGCVVVLGKVGRNVAAGMTGGLAYILDEDNTLIPKVNREIVKIQRLSAPVGQMQLKNLIEAHVEKTGSTKGAAILKDWDNYLSLFWQLVPPSEEDTPEANAKYDTTTAE 1661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01942 1661 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 166 1649 - -
Pste5g01942 1661 Pfam GXGXG motif 1418 1600 IPR002489 GO:0016491
Pste5g01942 1661 Gene3D Aldolase class I 638 1352 IPR013785 -
Pste5g01942 1661 Pfam Glutamine amidotransferases class-II 164 586 IPR017932 -
Pste5g01942 1661 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 164 700 IPR029055 -
Pste5g01942 1661 Gene3D Aldolase class I 590 944 IPR013785 -
Pste5g01942 1661 MobiDBLite consensus disorder prediction 1 28 - -
Pste5g01942 1661 Pfam Conserved region in glutamate synthase 952 1336 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pste5g01942 1661 FunFam Ferredoxin-dependent glutamate synthase, chloroplastic 590 940 - -
Pste5g01942 1661 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1386 1649 IPR036485 GO:0016491
Pste5g01942 1661 CDD GltS_FMN 955 1350 IPR002932 GO:0006537|GO:0015930|GO:0016638
Pste5g01942 1661 CDD GltS 164 581 - -
Pste5g01942 1661 FunFam Glutamate synthase, large subunit 164 596 - -
Pste5g01942 1661 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 164 590 IPR029055 -
Pste5g01942 1661 MobiDBLite consensus disorder prediction 1 26 - -
Pste5g01942 1661 CDD gltB_C 1393 1643 IPR002489 GO:0016491
Pste5g01942 1661 FunFam Ferredoxin-dependent glutamate synthase, chloroplastic 1374 1649 - -
Pste5g01942 1661 SUPERFAMILY FMN-linked oxidoreductases 607 1374 - -
Pste5g01942 1661 Gene3D - 1374 1649 IPR036485 GO:0016491
Pste5g01942 1661 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 164 563 IPR017932 -
Pste5g01942 1661 FunFam Ferredoxin-dependent glutamate synthase, chloroplastic 941 1352 - -
Pste5g01942 1661 Pfam Glutamate synthase central domain 613 893 IPR006982 GO:0006807|GO:0015930
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01942 Pste-Chr5 12302575 12335111 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01942 5 12302575 12335111 Pste5g01942 5 12302575 12335111 ECH