Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01922 GCAGGAGTGAATGATAGAGTTAGAGATGAAGAAAAGAGAAGTTGCAGAGAAGGTATGCATTTCAGAACCCTAACTGTACGTTATGGAATTGACTGTGGGTTATTGAGAGTTGTAGCTACTTCAAATAGCCTTACTGTTGCTGGTATGATATCAAAGAGTAAAATGGAAGTAGAGGCATTGGGTCCTAACCACTCTCCTAGTTTTCTTAGTCAATCACTTCGTGCTGTTGTACCTATGCTTTTGATTTCAACAGGATATGTTGACCCTGGAAAGTGGGTAGCAACTGTTGAAGGTGGTGCACGGTTTGGGTTTGATCTGATGGCTTTCATGCTTATTTTCAATTTTGCTGCAATCTTCTGTCTGTACATATCTGCAAGGATCGGTCTAATTACAGGAAAAAATCTAGCTCAGGAAGAGAGAAGTTCAATGATGCAAATATCGGTGAAAACAGTTCTTGGATGTGTTGACATGCATGATTGGAAGCAACATGATGAGTATGATTCGTGGACATGCTTGCTTCTTGGAGTTCAAACAGAATTTTCAGTGATAATGCTTGACCTTAACATGATCTTGGGCATGGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCACTTGTGTCTTTTTAACTGCTACTGGTGCTGTTTTTCACATACTTCTCACAGTCCTATTTGACATTGAGAAGGCAAAAATCCTAGGCCAGTTTGTTGCAGGCTTTGTATTGCTTACTTTTATACTTGGACTGCTTATCAATCAAACGGAAATTCCATTTTCCATCAATGGAATACCAACAAGGTTGAGCGGGGAGAGTGCATTCGTTCTAATGAGTCTTCTAGGAGCAAATCTTGTACCTCATAACTTTTACCTCCATTCCTCTATTGTACAGTGGCATCAGGGACCGGCAAGCATTTCTAAGAACGCTTTGTGTCATAATCATTTTTTGGCCATCTTATGTGTCTTCAGTGGTCTTAATTTGGTAAATAATATGCTGATGACTGCCTCGGCAAGTGAGTTCTACAGTACAGGTCCTGTTCTGCTTACTTTTCAGGATGCATTGTCACCAATGGAACAGGTCTTACGTAGCCCAATTGCTCTGCTTGGGTTTTTTCTCATTTTGTTTCTTGCAAATCAAACCACAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTAGTGCATGGTTTCTTCAAATTGGATATTCCAGGTTGGCTTCATTATGCTACAATTAGAGTGATTGCTGTTTTGCCTGCCCTTTATTGTGTTTGGAGTTCAGGAGCTGAAGGGATGTATCAGCTACTATTATTCACTCAAGTTTTGGTAGCTCTGCAACTTCCATCTTTTGTTATCCCCCTTTTTCGGGTTGCTACATCTAGATCAATAATGGGTGTACACAAGATTTCCCAATTTTTGGAACTTTTGGCATTGATCATATTCATTGGGATGCTTGGCCTGAATATTGTCTTCGTAGTAGAAATGGTATTCGGCAATAGTGATTGGGCAAGTGATTTAAGATGGACTGTGGGGAGTGGTGTGTCTGTCTCATATTTAGTTCTTCTTACTGCTGCTTTTACATCTTTATGTTTGATGCTTTGGTTAGCTGCCACACCTTTAAGATCTGCCAGTATCCAATTAGATGCTCAGTCATGGAACTGGGATATGCCAGAGACTCTGCGAAATCCACCAGCTGTTGGTGAGGAATCATATTTAACTGAAGCAAGGTGTCGTGAAGATGTATCTATGCATGAGGAACTCACACCAGCTATAGCAAAGCCCTTGGAATATTCGGATGTATCACTTCCTAGTTTTCATCCTCATCTACCTGAATCTATAATGGAACCTGAACCCCATCTGAATGCTGTAAGGGAGAATCATTATATTACATCTACTTCCACGTCGGACTCAGAGGTAGTATCAACTGTAGTTAATGAGATTTCTGATTCTCAACTGGAAGACACCAAAACTATAAGAATGGAAACAAATACCCCAATTGAGAAAACTGTGGAAGTTGAAGGAGAATCTACTGCTGAAAGGGATGATGATGATGGAGATTCATGGGAAGCTGAAGAACCTTCAAGAGTGGTATCAGCTAGTGTTCCATCTTCTACATCAGATGGACCTGCATCATTCAGGAGTCTTAATGGCAAAAGTGATGAAGGAGGGAATAGCTTTGGAAGTCTTTCAAGAATAGAAGGCTTAGGGCGTGCAGCAAGGCGTCAGCTAGCTGCAGTTCTTGATGAATTCTGGGGACAACTATTTGATTTCCATGGGCAAGTAATCCAGGAAGCAAAGGCTAAGAAAATTGACCTTTTGCTGGGAGTGGGTGTAGATTCAAGACCCACCAGTTCCTTGCAAAAAGTGGATGCTTGTGGAAAGGACTATTCCAAGCAGCCTAGGATTCGAGGTAATTCTGAGTCTTCTTATGGCCTTCAGAGGAGTTCTTCCTCAATGCAGGCAAATCCCATCCAATTATTGGATGCATATGTACCGAACTGTAGCCACAATCTCCTTGATTCTGGTGAGAGGCGCTATTCCAGTGTGCATAATCTACATTCATCCAAGGCTTGGGATTATCAACCAGCTACCATACATGGTTATCAGACTGCATCTTATCTTAGTCGGCTTGCTAAAGACAGAAATTCTGCTAACATAAATGGTCCGGTGGACTTGTCATCACTGAAATCCCCTTCCATAGTTAATGCAAAGTACAGGGATTCTCTTGCATTTGCTTTGGGGAAAAGGTTGCATAGTGGTTCAAGTGTAGGCCAACCCCCAGGGTTCCCGAACGTGGCTGTCTCTAGAGATTGCCAAATACAATCTGAGAGATCTAATTATGACATTTGCTCTTCTGGATCTACAGATAATACATCCAATTCAGTTAACACTAAAAGGTACCACAGTTTGCCGGACATTTCAGGATGCATTCCCCACAGGGCTGGTTATGTGTCTGATAAAAATGCTCCCCGGGATGGTTCTGTTGGATATGGATCTTTTGCTAGTAGGATGTGTTATGGACAATCATTATATTTAAATTCTGGATTAAGAACAAGTAATTTGGCCTTAGATGAACTCTTTTCATCTAAATTTTACATTGAGGCACTCTGTTCACAGTTGAGTTCTGGTTTTGATAATGGATGCCTCCGGTCTAGACTGCTTGATGAGCAGTTTGGGGTAGCTGGGAGAATTACTAACGTTGCCATGGAAGGTGTTGGCAATAGGCCTAATGCAATTCAAGAAACTACTTCATTTGTGGATATAGAGGGGAAACTTCTTCAGTCTGTTAGACTTTGCATTGTGAAGCTCTTAAAACTGGAGGGCTCTGATTGGTTGTTTAGACAGAATTGCGGAGCTGATGAGGATCTAATATATTGTGTTGCTGCAAGAGAGAAGTTTGTTTATGAAATTGAAAGTAGGAAATTTGGTACATCAATGAAGAATAATGAGGCATATTCCTCAGGTTTTTCGGTTTCCTCAGTTCCTAATTGCGGGGAGGGATGTATATGGAGAACAGATCTAATAATAAGCTTTGGGGTGTGGTGTATCCACAGTATTCTTAACCTCTCACTTGTTGAAAGCCGGCCCGAGCTTTGGGGGAAATACACCTATGTTCTTAATCGTCTCCAGGGGATCATTGAACCAGCTTTCCTTAAGCCTCGTAGTCCTTTGGCCCCATGCTTTTGCCTTCAAGTTCAGCAAAAGTTAAGCCCTCATCCTCATCTTTGGAACGGGATGCTACCCTCAACTGCAATACTGGGCCAGGGCAAATGCACAACTGCATCAAAGTTGCTTGAACTTATCAGGGATGTTGAGCTTGCAATCTCTAGCAGGAAAGGACGTACAGGAACTGCTGCAGGTGATGTGGCTTTCCCTATGGGGAAGGAAAACGTGGCGTCTGTTCTCAAACGCTACAAGCGGAGATTATCTGCCAAGCCCGTTGGTACTAATGAAGGGATAAGTTCACGCAAGATTCCGGCGTTAGCACCATATAACAACCAATAA 3999 0.4186 AGVNDRVRDEEKRSCREGMHFRTLTVRYGIDCGLLRVVATSNSLTVAGMISKSKMEVEALGPNHSPSFLSQSLRAVVPMLLISTGYVDPGKWVATVEGGARFGFDLMAFMLIFNFAAIFCLYISARIGLITGKNLAQEERSSMMQISVKTVLGCVDMHDWKQHDEYDSWTCLLLGVQTEFSVIMLDLNMILGMAQGLNLIFGWDLFTCVFLTATGAVFHILLTVLFDIEKAKILGQFVAGFVLLTFILGLLINQTEIPFSINGIPTRLSGESAFVLMSLLGANLVPHNFYLHSSIVQWHQGPASISKNALCHNHFLAILCVFSGLNLVNNMLMTASASEFYSTGPVLLTFQDALSPMEQVLRSPIALLGFFLILFLANQTTALTWSLGGEVVVHGFFKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLLFTQVLVALQLPSFVIPLFRVATSRSIMGVHKISQFLELLALIIFIGMLGLNIVFVVEMVFGNSDWASDLRWTVGSGVSVSYLVLLTAAFTSLCLMLWLAATPLRSASIQLDAQSWNWDMPETLRNPPAVGEESYLTEARCREDVSMHEELTPAIAKPLEYSDVSLPSFHPHLPESIMEPEPHLNAVRENHYITSTSTSDSEVVSTVVNEISDSQLEDTKTIRMETNTPIEKTVEVEGESTAERDDDDGDSWEAEEPSRVVSASVPSSTSDGPASFRSLNGKSDEGGNSFGSLSRIEGLGRAARRQLAAVLDEFWGQLFDFHGQVIQEAKAKKIDLLLGVGVDSRPTSSLQKVDACGKDYSKQPRIRGNSESSYGLQRSSSSMQANPIQLLDAYVPNCSHNLLDSGERRYSSVHNLHSSKAWDYQPATIHGYQTASYLSRLAKDRNSANINGPVDLSSLKSPSIVNAKYRDSLAFALGKRLHSGSSVGQPPGFPNVAVSRDCQIQSERSNYDICSSGSTDNTSNSVNTKRYHSLPDISGCIPHRAGYVSDKNAPRDGSVGYGSFASRMCYGQSLYLNSGLRTSNLALDELFSSKFYIEALCSQLSSGFDNGCLRSRLLDEQFGVAGRITNVAMEGVGNRPNAIQETTSFVDIEGKLLQSVRLCIVKLLKLEGSDWLFRQNCGADEDLIYCVAAREKFVYEIESRKFGTSMKNNEAYSSGFSVSSVPNCGEGCIWRTDLIISFGVWCIHSILNLSLVESRPELWGKYTYVLNRLQGIIEPAFLKPRSPLAPCFCLQVQQKLSPHPHLWNGMLPSTAILGQGKCTTASKLLELIRDVELAISSRKGRTGTAAGDVAFPMGKENVASVLKRYKRRLSAKPVGTNEGISSRKIPALAPYNNQ 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01922 1332 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 63 540 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 MobiDBLite consensus disorder prediction 695 722 - -
Pste5g01922 1332 Pfam Natural resistance-associated macrophage protein 92 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 MobiDBLite consensus disorder prediction 794 813 - -
Pste5g01922 1332 PRINTS Natural resistance-associated macrophage protein signature 406 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 PRINTS Natural resistance-associated macrophage protein signature 174 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 PRINTS Natural resistance-associated macrophage protein signature 276 299 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 PRINTS Natural resistance-associated macrophage protein signature 378 397 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 PRINTS Natural resistance-associated macrophage protein signature 438 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste5g01922 1332 MobiDBLite consensus disorder prediction 652 722 - -
Pste5g01922 1332 PIRSF EIN2 51 1328 IPR017187 GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01922 Pste-Chr5 12173626 12195139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01922 55 1322 Miscellaneous Gene Families AT5G03280 49.098 0.0 1119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01922 5 12173626 12195139 Pste5g01922 5 12173626 12195139 ECH
Pste5g01922 5 12173626 12195139 Pste4g02128 4 15559786 15566394 PCT